Literature DB >> 15556009

Arresting cancer proliferation by small-molecule gene regulation.

Liliane A Dickinson1, Ryan Burnett, Christian Melander, Benjamin S Edelson, Paramjit S Arora, Peter B Dervan, Joel M Gottesfeld.   

Abstract

A small library of pyrrole-imidazole polyamide-DNA alkylator (chlorambucil) conjugates was screened for effects on morphology and growth characteristics of a human colon carcinoma cell line, and a compound was identified that causes cells to arrest in the G2/M stage of the cell cycle. Microarray analysis indicates that the histone H4c gene is significantly downregulated by this polyamide. RT-PCR and Western blotting experiments confirm this result, and siRNA to H4c mRNA yields the same cellular response. Strikingly, reduction of H4 protein by >50% does not lead to widespread changes in global gene expression. Sequence-specific alkylation within the coding region of the H4c gene in cell culture was confirmed by LM-PCR. The compound is active in a wide range of cancer cell lines, and treated cells do not form tumors in nude mice. The compound is also active in vivo, blocking tumor growth in mice, without obvious animal toxicity.

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Year:  2004        PMID: 15556009     DOI: 10.1016/j.chembiol.2004.09.004

Source DB:  PubMed          Journal:  Chem Biol        ISSN: 1074-5521


  26 in total

1.  Genome-wide Mapping of Drug-DNA Interactions in Cells with COSMIC (Crosslinking of Small Molecules to Isolate Chromatin).

Authors:  Graham S Erwin; Matthew P Grieshop; Devesh Bhimsaria; Asuka Eguchi; José A Rodríguez-Martínez; Aseem Z Ansari
Journal:  J Vis Exp       Date:  2016-01-20       Impact factor: 1.355

Review 2.  An overview of chemical processes that damage cellular DNA: spontaneous hydrolysis, alkylation, and reactions with radicals.

Authors:  Kent S Gates
Journal:  Chem Res Toxicol       Date:  2009-11       Impact factor: 3.739

3.  Mapping polyamide-DNA interactions in human cells reveals a new design strategy for effective targeting of genomic sites.

Authors:  Graham S Erwin; Devesh Bhimsaria; Asuka Eguchi; Aseem Z Ansari
Journal:  Angew Chem Int Ed Engl       Date:  2014-07-27       Impact factor: 15.336

Review 4.  Controlling gene networks and cell fate with precision-targeted DNA-binding proteins and small-molecule-based genome readers.

Authors:  Asuka Eguchi; Garrett O Lee; Fang Wan; Graham S Erwin; Aseem Z Ansari
Journal:  Biochem J       Date:  2014-09-15       Impact factor: 3.857

5.  Expression profiling elucidates a molecular gene signature for pulmonary hypertension in sarcoidosis.

Authors:  Sunit Singla; Tong Zhou; Kamran Javaid; Taimur Abbasi; Nancy Casanova; Wei Zhang; Shwu-Fan Ma; Michael S Wade; Imre Noth; Nadera J Sweiss; Joe G N Garcia; Roberto F Machado
Journal:  Pulm Circ       Date:  2016-12       Impact factor: 3.017

6.  Chromatin structure determines accessibility of a hairpin polyamide-chlorambucil conjugate at histone H4 genes in pancreatic cancer cells.

Authors:  Christine Jespersen; Elisabetta Soragni; C James Chou; Paramjit S Arora; Peter B Dervan; Joel M Gottesfeld
Journal:  Bioorg Med Chem Lett       Date:  2012-04-25       Impact factor: 2.823

7.  Semi-automated high-throughput fluorescent intercalator displacement-based discovery of cytotoxic DNA binding agents from a large compound library.

Authors:  Lateca S Glass; Aditi Bapat; Mark R Kelley; Millie M Georgiadis; Eric C Long
Journal:  Bioorg Med Chem Lett       Date:  2010-01-20       Impact factor: 2.823

8.  DNA sequence-specific polyamides alleviate transcription inhibition associated with long GAA.TTC repeats in Friedreich's ataxia.

Authors:  Ryan Burnett; Christian Melander; James W Puckett; Leslie S Son; Robert D Wells; Peter B Dervan; Joel M Gottesfeld
Journal:  Proc Natl Acad Sci U S A       Date:  2006-07-20       Impact factor: 11.205

9.  Synthetic genome readers target clustered binding sites across diverse chromatin states.

Authors:  Graham S Erwin; Matthew P Grieshop; Devesh Bhimsaria; Truman J Do; José A Rodríguez-Martínez; Charu Mehta; Kanika Khanna; Scott A Swanson; Ron Stewart; James A Thomson; Parameswaran Ramanathan; Aseem Z Ansari
Journal:  Proc Natl Acad Sci U S A       Date:  2016-11-08       Impact factor: 11.205

10.  Small molecules targeting histone H4 as potential therapeutics for chronic myelogenous leukemia.

Authors:  C James Chou; Michelle E Farkas; Sherry M Tsai; David Alvarez; Peter B Dervan; Joel M Gottesfeld
Journal:  Mol Cancer Ther       Date:  2008-04       Impact factor: 6.261

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