Literature DB >> 28089689

Piecing it together: Unraveling the elusive structure-function relationship in single-pass membrane receptors.

Christopher C Valley1, Andrew K Lewis2, Jonathan N Sachs3.   

Abstract

The challenge of crystallizing single-pass plasma membrane receptors has remained an obstacle to understanding the structural mechanisms that connect extracellular ligand binding to cytosolic activation. For example, the complex interplay between receptor oligomerization and conformational dynamics has been, historically, only inferred from static structures of isolated receptor domains. A fundamental challenge in the field of membrane receptor biology, then, has been to integrate experimentally observable dynamics of full-length receptors (e.g. diffusion and conformational flexibility) into static structural models of the disparate domains. In certain receptor families, e.g. the ErbB receptors, structures have led somewhat linearly to a putative model of activation. In other families, e.g. the tumor necrosis factor (TNF) receptors, structures have produced divergent hypothetical mechanisms of activation and transduction. Here, we discuss in detail these and other related receptors, with the goal of illuminating the current challenges and opportunities in building comprehensive models of single-pass receptor activation. The deepening understanding of these receptors has recently been accelerated by new experimental and computational tools that offer orthogonal perspectives on both structure and dynamics. As such, this review aims to contextualize those technological developments as we highlight the elegant and complex conformational communication between receptor domains. This article is part of a Special Issue entitled: Interactions between membrane receptors in cellular membranes edited by Kalina Hristova.
Copyright © 2017 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Epidermal growth factor receptor; ErbB receptors; Membrane receptors; Tumor necrosis factor receptors

Mesh:

Substances:

Year:  2017        PMID: 28089689      PMCID: PMC5487282          DOI: 10.1016/j.bbamem.2017.01.016

Source DB:  PubMed          Journal:  Biochim Biophys Acta Biomembr        ISSN: 0005-2736            Impact factor:   3.747


  161 in total

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Authors:  J Ren; S Lew; J Wang; E London
Journal:  Biochemistry       Date:  1999-05-04       Impact factor: 3.162

2.  Distribution of resting and ligand-bound ErbB1 and ErbB2 receptor tyrosine kinases in living cells using number and brightness analysis.

Authors:  Peter Nagy; Jeroen Claus; Thomas M Jovin; Donna J Arndt-Jovin
Journal:  Proc Natl Acad Sci U S A       Date:  2010-09-02       Impact factor: 11.205

3.  TMDOCK: An Energy-Based Method for Modeling α-Helical Dimers in Membranes.

Authors:  Andrei L Lomize; Irina D Pogozheva
Journal:  J Mol Biol       Date:  2016-09-10       Impact factor: 5.469

4.  Sub-resolution lipid domains exist in the plasma membrane and regulate protein diffusion and distribution.

Authors:  Dylan M Owen; David J Williamson; Astrid Magenau; Katharina Gaus
Journal:  Nat Commun       Date:  2012       Impact factor: 14.919

5.  Lateral diffusion of epidermal growth factor complexed to its surface receptors does not account for the thermal sensitivity of patch formation and endocytosis.

Authors:  G M Hillman; J Schlessinger
Journal:  Biochemistry       Date:  1982-03-30       Impact factor: 3.162

6.  The Membrane Mimetic Affects the Spatial Structure and Mobility of EGFR Transmembrane and Juxtamembrane Domains.

Authors:  Konstantin S Mineev; Stanislava V Panova; Olga V Bocharova; Eduard V Bocharov; Alexander S Arseniev
Journal:  Biochemistry       Date:  2015-10-07       Impact factor: 3.162

7.  Lipid rafts and nonrafts mediate tumor necrosis factor related apoptosis-inducing ligand induced apoptotic and nonapoptotic signals in non small cell lung carcinoma cells.

Authors:  Jin H Song; Margaret C L Tse; Anita Bellail; Surasak Phuphanich; Fadlo Khuri; Norman M Kneteman; Chunhai Hao
Journal:  Cancer Res       Date:  2007-07-15       Impact factor: 12.701

8.  EGFR activation monitored by SW-FCCS in live cells.

Authors:  Xiaoxiao Ma; Sohail Ahmed; Thorsten Wohland
Journal:  Front Biosci (Elite Ed)       Date:  2011-01-01

9.  Mechanisms of activation of receptor tyrosine kinases: monomers or dimers.

Authors:  Ichiro N Maruyama
Journal:  Cells       Date:  2014-04-22       Impact factor: 6.600

10.  Architecture and membrane interactions of the EGF receptor.

Authors:  Anton Arkhipov; Yibing Shan; Rahul Das; Nicholas F Endres; Michael P Eastwood; David E Wemmer; John Kuriyan; David E Shaw
Journal:  Cell       Date:  2013-01-31       Impact factor: 41.582

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  10 in total

1.  Noncompetitive inhibitors of TNFR1 probe conformational activation states.

Authors:  Chih Hung Lo; Tory M Schaaf; Benjamin D Grant; Colin Kin-Wye Lim; Prachi Bawaskar; Courtney C Aldrich; David D Thomas; Jonathan N Sachs
Journal:  Sci Signal       Date:  2019-07-30       Impact factor: 8.192

2.  Multiscale Simulations of Biological Membranes: The Challenge To Understand Biological Phenomena in a Living Substance.

Authors:  Giray Enkavi; Matti Javanainen; Waldemar Kulig; Tomasz Róg; Ilpo Vattulainen
Journal:  Chem Rev       Date:  2019-03-12       Impact factor: 60.622

3.  Noncompetitive Allosteric Antagonism of Death Receptor 5 by a Synthetic Affibody Ligand.

Authors:  Nagamani Vunnam; Sophia Szymonski; Petra Hirsova; Gregory J Gores; Jonathan N Sachs; Benjamin J Hackel
Journal:  Biochemistry       Date:  2020-09-30       Impact factor: 3.162

Review 4.  Effect of Membrane Composition on Receptor Association: Implications of Cancer Lipidomics on ErbB Receptors.

Authors:  Aiswarya B Pawar; Durba Sengupta
Journal:  J Membr Biol       Date:  2018-01-19       Impact factor: 1.843

5.  Death Receptor 5 Activation Is Energetically Coupled to Opening of the Transmembrane Domain Dimer.

Authors:  Nagamani Vunnam; Cecily Kristine Campbell-Bezat; Andrew K Lewis; Jonathan N Sachs
Journal:  Biophys J       Date:  2017-07-25       Impact factor: 4.033

Review 6.  Pondering the mechanism of receptor tyrosine kinase activation: The case for ligand-specific dimer microstate ensembles.

Authors:  Kelly Karl; Kalina Hristova
Journal:  Curr Opin Struct Biol       Date:  2021-08-13       Impact factor: 6.809

Review 7.  The transition model of RTK activation: A quantitative framework for understanding RTK signaling and RTK modulator activity.

Authors:  Michael D Paul; Kalina Hristova
Journal:  Cytokine Growth Factor Rev       Date:  2019-11-01       Impact factor: 7.638

8.  Dimerization of the Trk receptors in the plasma membrane: effects of their cognate ligands.

Authors:  Fozia Ahmed; Kalina Hristova
Journal:  Biochem J       Date:  2018-11-30       Impact factor: 3.857

9.  Interactions between Ligand-Bound EGFR and VEGFR2.

Authors:  Michael D Paul; Kalina Hristova
Journal:  J Mol Biol       Date:  2021-04-20       Impact factor: 6.151

10.  Full-length in meso structure and mechanism of rat kynurenine 3-monooxygenase inhibition.

Authors:  Shinya Mimasu; Hiroaki Yamagishi; Satoshi Kubo; Mie Kiyohara; Toshihiro Matsuda; Toshiko Yahata; Heather A Thomson; Christopher D Hupp; Julie Liu; Takao Okuda; Kenichi Kakefuda
Journal:  Commun Biol       Date:  2021-02-04
  10 in total

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