Literature DB >> 28084735

Real-Time Screening of Biocatalysts in Live Bacterial Colonies.

Cunyu Yan1, Fabio Parmeggiani1, Emrys A Jones2, Emmanuelle Claude2, Shaneela A Hussain1, Nicholas J Turner1, Sabine L Flitsch1, Perdita E Barran1.   

Abstract

Screening of bacterial colonies to identify new biocatalytic activities is a widely adopted tool in biotechnology, but is constrained by the requirements for colorimetric or tag-based detection methods. Herein we report a label-free screening platform for biotransformations in live colonies using desorption electrospray ionization coupled with ion mobility mass spectrometry imaging (DiBT-IMMS). The screening method is demonstrated for both ammonia lyases and P450 monooxygenases expressed within live bacterial colonies and is shown to enable multiplexing of enzyme variants and substrate libraries simultaneously.

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Year:  2017        PMID: 28084735     DOI: 10.1021/jacs.6b12165

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  15 in total

Review 1.  Defining new chemical space for drug penetration into Gram-negative bacteria.

Authors:  Shibin Zhao; Justyna W Adamiak; Vincent Bonifay; Jitender Mehla; Helen I Zgurskaya; Derek S Tan
Journal:  Nat Chem Biol       Date:  2020-11-16       Impact factor: 15.040

2.  Screening and characterization of a diverse panel of metagenomic imine reductases for biocatalytic reductive amination.

Authors:  James R Marshall; Peiyuan Yao; Sarah L Montgomery; James D Finnigan; Thomas W Thorpe; Ryan B Palmer; Juan Mangas-Sanchez; Richard A M Duncan; Rachel S Heath; Kirsty M Graham; Darren J Cook; Simon J Charnock; Nicholas J Turner
Journal:  Nat Chem       Date:  2020-12-30       Impact factor: 24.427

3.  Spatiochemically Profiling Microbial Interactions with Membrane Scaffolded Desorption Electrospray Ionization-Ion Mobility-Imaging Mass Spectrometry and Unsupervised Segmentation.

Authors:  Berkley M Ellis; Caleb N Fischer; Leroy B Martin; Brian O Bachmann; John A McLean
Journal:  Anal Chem       Date:  2019-10-24       Impact factor: 6.986

Review 4.  Improving the discovery of secondary metabolite natural products using ion mobility-mass spectrometry.

Authors:  Alexandra C Schrimpe-Rutledge; Stacy D Sherrod; John A McLean
Journal:  Curr Opin Chem Biol       Date:  2017-12-26       Impact factor: 8.822

5.  Accelerating strain phenotyping with desorption electrospray ionization-imaging mass spectrometry and untargeted analysis of intact microbial colonies.

Authors:  Berkley M Ellis; Piyoosh K Babele; Jody C May; Carl H Johnson; Brian F Pfleger; Jamey D Young; John A McLean
Journal:  Proc Natl Acad Sci U S A       Date:  2021-12-07       Impact factor: 12.779

6.  Rapid Screening of Diverse Biotransformations for Enzyme Evolution.

Authors:  Emily E Kempa; James L Galman; Fabio Parmeggiani; James R Marshall; Julien Malassis; Clement Q Fontenelle; Jean-Baptiste Vendeville; Bruno Linclau; Simon J Charnock; Sabine L Flitsch; Nicholas J Turner; Perdita E Barran
Journal:  JACS Au       Date:  2021-04-08

7.  Quantitative analysis of biofluid spots by coated blade spray mass spectrometry, a new approach to rapid screening.

Authors:  Germán Augusto Gómez-Ríos; Marcos Tascon; Nathaly Reyes-Garcés; Ezel Boyacı; Justen Poole; Janusz Pawliszyn
Journal:  Sci Rep       Date:  2017-11-23       Impact factor: 4.379

8.  Archimedes' principle for characterisation of recombinant whole cell biocatalysts.

Authors:  Steven Schmitt; Marcel Walser; Michael Rehmann; Sabine Oesterle; Sven Panke; Martin Held
Journal:  Sci Rep       Date:  2018-02-14       Impact factor: 4.379

9.  Profiling of Microbial Colonies for High-Throughput Engineering of Multistep Enzymatic Reactions via Optically Guided Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry.

Authors:  Tong Si; Bin Li; Troy J Comi; Yuwei Wu; Pingfan Hu; Yuying Wu; Yuhao Min; Douglas A Mitchell; Huimin Zhao; Jonathan V Sweedler
Journal:  J Am Chem Soc       Date:  2017-08-30       Impact factor: 15.419

10.  Real-Time Monitoring of Enzyme-Catalysed Reactions using Deep UV Resonance Raman Spectroscopy.

Authors:  Chloe Westley; Heidi Fisk; Yun Xu; Katherine A Hollywood; Andrew J Carnell; Jason Micklefield; Nicholas J Turner; Royston Goodacre
Journal:  Chemistry       Date:  2017-05-02       Impact factor: 5.236

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