Literature DB >> 28080034

Mechanism of Flavoprotein l-6-Hydroxynicotine Oxidase: pH and Solvent Isotope Effects and Identification of Key Active Site Residues.

Paul F Fitzpatrick1, Fatemeh Chadegani1, Shengnan Zhang1, Vi Dougherty1.   

Abstract

The flavoenzyme l-6-hydroxynicotine oxidase is a member of the monoamine oxidase family that catalyzes the oxidation of (S)-6-hydroxynicotine to 6-hydroxypseudooxynicotine during microbial catabolism of nicotine. While the enzyme has long been understood to catalyze oxidation of the carbon-carbon bond, it has recently been shown to catalyze oxidation of a carbon-nitrogen bond [Fitzpatrick, P. F., et al. (2016) Biochemistry 55, 697-703]. The effects of pH and mutagenesis of active site residues have now been utilized to study the mechanism and roles of active site residues. Asn166 and Tyr311 bind the substrate, while Lys287 forms a water-mediated hydrogen bond with flavin N5. The N166A and Y311F mutations result in ∼30- and ∼4-fold decreases in kcat/Km and kred for (S)-6-hydroxynicotine, respectively, with larger effects on the kcat/Km value for (S)-6-hydroxynornicotine. The K287M mutation results in ∼10-fold decreases in these parameters and a 6000-fold decrease in the kcat/Km value for oxygen. The shapes of the pH profiles are not altered by the N166A and Y311F mutations. There is no solvent isotope effect on the kcat/Km value for amines. The results are consistent with a model in which both the charged and neutral forms of the amine can bind, with the former rapidly losing a proton to a hydrogen bond network of water and amino acids in the active site prior to the transfer of hydride to the flavin.

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Year:  2017        PMID: 28080034      PMCID: PMC5312672          DOI: 10.1021/acs.biochem.6b01160

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  27 in total

1.  Variations in activity and inhibition with pH: the protonated amine is the substrate for monoamine oxidase, but uncharged inhibitors bind better.

Authors:  T Z E Jones; D Balsa; M Unzeta; R R Ramsay
Journal:  J Neural Transm (Vienna)       Date:  2007-03-31       Impact factor: 3.575

2.  Reaction mechanism of monoamine oxidase from QM/MM calculations.

Authors:  Enrique Abad; Roland K Zenn; Johannes Kästner
Journal:  J Phys Chem B       Date:  2013-11-08       Impact factor: 2.991

3.  The structure of maize polyamine oxidase K300M mutant in complex with the natural substrates provides a snapshot of the catalytic mechanism of polyamine oxidation.

Authors:  Annarita Fiorillo; Rodolfo Federico; Fabio Polticelli; Alberto Boffi; Franco Mazzei; Massimo Di Fusco; Andrea Ilari; Paraskevi Tavladoraki
Journal:  FEBS J       Date:  2011-01-25       Impact factor: 5.542

4.  Lys300 plays a major role in the catalytic mechanism of maize polyamine oxidase.

Authors:  Fabio Polticelli; Jaswir Basran; Carmen Faso; Alessandra Cona; Giovanni Minervini; Riccardo Angelini; Rodolfo Federico; Nigel S Scrutton; Paraskevi Tavladoraki
Journal:  Biochemistry       Date:  2005-12-13       Impact factor: 3.162

5.  Crystallographic snapshots of the complete reaction cycle of nicotine degradation by an amine oxidase of the monoamine oxidase (MAO) family.

Authors:  Galina Kachalova; Karl Decker; Andrew Holt; Hans D Bartunik
Journal:  Proc Natl Acad Sci U S A       Date:  2011-03-07       Impact factor: 11.205

6.  Structures and Mechanism of the Monoamine Oxidase Family.

Authors:  Helena Gaweska; Paul F Fitzpatrick
Journal:  Biomol Concepts       Date:  2011-10-01

7.  A lysine conserved in the monoamine oxidase family is involved in oxidation of the reduced flavin in mouse polyamine oxidase.

Authors:  Michelle Henderson Pozzi; Paul F Fitzpatrick
Journal:  Arch Biochem Biophys       Date:  2010-04-22       Impact factor: 4.013

8.  pH and kinetic isotope effects on the reductive half-reaction of D-amino acid oxidase.

Authors:  J M Denu; P F Fitzpatrick
Journal:  Biochemistry       Date:  1992-09-08       Impact factor: 3.162

9.  Mechanism of the Flavoprotein L-Hydroxynicotine Oxidase: Kinetic Mechanism, Substrate Specificity, Reaction Product, and Roles of Active-Site Residues.

Authors:  Paul F Fitzpatrick; Fatemeh Chadegani; Shengnan Zhang; Kenneth M Roberts; Cynthia S Hinck
Journal:  Biochemistry       Date:  2016-01-15       Impact factor: 3.162

10.  Amine oxidation mediated by lysine-specific demethylase 1: quantum mechanics/molecular mechanics insights into mechanism and role of lysine 661.

Authors:  Bora Karasulu; Mahendra Patil; Walter Thiel
Journal:  J Am Chem Soc       Date:  2013-08-29       Impact factor: 15.419

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  5 in total

1.  Mechanism of the Flavoprotein d-6-Hydroxynicotine Oxidase: Substrate Specificity, pH and Solvent Isotope Effects, and Roles of Key Active-Site Residues.

Authors:  Paul F Fitzpatrick; Vi Dougherty; Bishnu Subedi; Jesus Quilantan; Cynthia S Hinck; Andreina I Lujan; Jose R Tormos
Journal:  Biochemistry       Date:  2019-05-10       Impact factor: 3.162

2.  Crystallography Coupled with Kinetic Analysis Provides Mechanistic Underpinnings of a Nicotine-Degrading Enzyme.

Authors:  Margarita A Tararina; Song Xue; Lauren C Smith; Samantha N Muellers; Pedro O Miranda; Kim D Janda; Karen N Allen
Journal:  Biochemistry       Date:  2018-06-13       Impact factor: 3.162

3.  Mechanistic study of L-6-hydroxynicotine oxidase by DFT and ONIOM methods.

Authors:  Ibrahim Yildiz; Banu Sizirici Yildiz
Journal:  J Mol Model       Date:  2021-01-28       Impact factor: 1.810

4.  A cytochrome c is the natural electron acceptor for nicotine oxidoreductase.

Authors:  Mark Dulchavsky; Christopher T Clark; James C A Bardwell; Frederick Stull
Journal:  Nat Chem Biol       Date:  2021-01-11       Impact factor: 15.040

Review 5.  The enzymes of microbial nicotine metabolism.

Authors:  Paul F Fitzpatrick
Journal:  Beilstein J Org Chem       Date:  2018-08-31       Impact factor: 2.883

  5 in total

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