Literature DB >> 25579687

Variation of X-chromosomal microsatellites in Belarus within the context of their genetic diversity in Europe.

Krzysztof Rębała1, Svetlana A Kotova2, Veranika I Rybakova2, Tatsiana V Zabauskaya2, Alena A Shyla2, Alena A Spivak2, Iosif S Tsybovsky2, Zofia Szczerkowska3.   

Abstract

More and more X-STR data are becoming available for worldwide human populations for forensic and anthropological investigations, but the European datasets analysed so far represent mainly the central, northern, western and southern part of the continent with populations of Eastern Europe being practically uninvestigated. In the present study, we assessed genetic variation and linkage disequilibrium of 19 X-chromosomal STR markers (DXS7132, DXS7133, DXS7423, DXS7424, DXS8377, DXS8378, DXS9895, DXS10074, DXS10075, DXS10079, DXS10101, DXS10103, DXS10134, DXS10135, DXS10146, DXS10147, DXS10148, GATA172D05, HPRTB) in four regional populations of an Eastern European state of Belarus, including 12 loci incorporated in the Argus X-12 kit. Our results revealed cumulative power of discrimination of the tested X-STR loci to amount to 0.999999999999996 and 0.999999997 in females and males, respectively. Analysis of molecular variance demonstrated regional stratification within the country, excluding the use of a common X-STR database for Belarus in forensic casework. However, development of a separate X-STR database for the northwestern part of the country or exclusion of four loci displaying regional differences from the dataset were shown to eliminate the observed geographic substructure among Belarusians. Comparison of the Belarusian genotypes with X-STR data from other European populations disclosed a geography-driven northeast-southwest gradient extending from Belarus and Finland to Iberia and Italy. This study is the first extensive report on variation of X-STR markers in populations from Eastern Europe and the first comprehensive analysis of diversity of X-chromosomal microsatellites in Europe.
Copyright © 2015 Elsevier Ireland Ltd. All rights reserved.

Entities:  

Keywords:  Belarus; Europe; Population genetics; X-STRs

Mesh:

Year:  2015        PMID: 25579687     DOI: 10.1016/j.fsigen.2014.12.011

Source DB:  PubMed          Journal:  Forensic Sci Int Genet        ISSN: 1872-4973            Impact factor:   4.882


  3 in total

1.  Analysis of 12 X-STR loci in the population of south Croatia.

Authors:  Gordan Mršić; Petar Ozretić; Josip Crnjac; Siniša Merkaš; Ivana Račić; Sara Rožić; Viktorija Sukser; Maja Popović; Marina Korolija
Journal:  Mol Biol Rep       Date:  2017-01-09       Impact factor: 2.316

2.  STR Profiling for Discrimination between Wild and Domestic Swine Specimens and between Main Breeds of Domestic Pigs Reared in Belarus.

Authors:  Krzysztof Rębała; Alina A Rabtsava; Svetlana A Kotova; Viachaslau N Kipen; Natalja V Zhurina; Alla I Gandzha; Iosif S Tsybovsky
Journal:  PLoS One       Date:  2016-11-16       Impact factor: 3.240

3.  Investigation of 12 X-STR loci in Mongolian and Eastern Han populations of China with comparison to other populations.

Authors:  Ruiyang Tao; Jiashuo Zhang; Yingnan Bian; Rixia Dong; Xiling Liu; Chao Jin; Ruxin Zhu; Suhua Zhang; Chengtao Li
Journal:  Sci Rep       Date:  2018-03-09       Impact factor: 4.379

  3 in total

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