Literature DB >> 28070568

Construction of Neonatal Diffusion Atlases via Spatio-Angular Consistency.

Behrouz Saghafi1, Geng Chen2, Feng Shi1, Pew-Thian Yap1, Dinggang Shen1.   

Abstract

Atlases constructed using diffusion-weighted imaging (DWI) are important tools for studying human brain development. Atlas construction is in general a two-step process involving image registration and image fusion. The focus of most studies so far has been on improving registration thus image fusion is commonly performed using simple averaging, often resulting in fuzzy atlases. In this paper, we propose a patch-based method for DWI atlas construction. Unlike other atlases that are based on the diffusion tensor model, our atlas is model-free. Instead of generating an atlas for each gradient direction independently and hence neglecting inter-image correlation, we propose to construct the atlas by jointly considering diffusion-weighted images of neighboring gradient directions. We employ a group regularization framework where local patches of angularly neighboring images are constrained for consistent spatio-angular atlas reconstruction. Experimental results verify that our atlas, constructed for neonatal data, reveals more structural details compared with the average atlas especially in the cortical regions. Our atlas also yields greater accuracy when used for image normalization.

Entities:  

Year:  2016        PMID: 28070568      PMCID: PMC5217164          DOI: 10.1007/978-3-319-47118-1_2

Source DB:  PubMed          Journal:  Patch Based Tech Med Imaging (2016)


  8 in total

1.  Multi-contrast human neonatal brain atlas: application to normal neonate development analysis.

Authors:  Kenichi Oishi; Susumu Mori; Pamela K Donohue; Thomas Ernst; Lynn Anderson; Steven Buchthal; Andreia Faria; Hangyi Jiang; Xin Li; Michael I Miller; Peter C M van Zijl; Linda Chang
Journal:  Neuroimage       Date:  2011-01-26       Impact factor: 6.556

Review 2.  Brain templates and atlases.

Authors:  Alan C Evans; Andrew L Janke; D Louis Collins; Sylvain Baillet
Journal:  Neuroimage       Date:  2012-01-10       Impact factor: 6.556

3.  Reproducibility of quantitative tractography methods applied to cerebral white matter.

Authors:  Setsu Wakana; Arvind Caprihan; Martina M Panzenboeck; James H Fallon; Michele Perry; Randy L Gollub; Kegang Hua; Jiangyang Zhang; Hangyi Jiang; Prachi Dubey; Ari Blitz; Peter van Zijl; Susumu Mori
Journal:  Neuroimage       Date:  2007-03-20       Impact factor: 6.556

4.  Diffeomorphic demons: efficient non-parametric image registration.

Authors:  Tom Vercauteren; Xavier Pennec; Aymeric Perchant; Nicholas Ayache
Journal:  Neuroimage       Date:  2008-11-07       Impact factor: 6.556

Review 5.  Diffusion weighted magnetic resonance imaging and its recent trend-a survey.

Authors:  Geetha Soujanya Chilla; Cher Heng Tan; Chenjie Xu; Chueh Loo Poh
Journal:  Quant Imaging Med Surg       Date:  2015-06

6.  Neonatal atlas construction using sparse representation.

Authors:  Feng Shi; Li Wang; Guorong Wu; Gang Li; John H Gilmore; Weili Lin; Dinggang Shen
Journal:  Hum Brain Mapp       Date:  2014-03-17       Impact factor: 5.038

7.  White and gray matter development in human fetal, newborn and pediatric brains.

Authors:  Hao Huang; Jiangyang Zhang; Setsu Wakana; Weihong Zhang; Tianbo Ren; Linda J Richards; Paul Yarowsky; Pamela Donohue; Ernest Graham; Peter C M van Zijl; Susumu Mori
Journal:  Neuroimage       Date:  2006-08-14       Impact factor: 6.556

Review 8.  Construction and application of human neonatal DTI atlases.

Authors:  Rajiv Deshpande; Linda Chang; Kenichi Oishi
Journal:  Front Neuroanat       Date:  2015-10-26       Impact factor: 3.856

  8 in total
  3 in total

1.  Spatio-angular consistent construction of neonatal diffusion MRI atlases.

Authors:  Behrouz Saghafi; Jaeil Kim; Geng Chen; Feng Shi; Weili Lin; Pew-Thian Yap; Dinggang Shen
Journal:  Hum Brain Mapp       Date:  2017-03-27       Impact factor: 5.038

2.  Graph-Constrained Sparse Construction of Longitudinal Diffusion-Weighted Infant Atlases.

Authors:  Jaeil Kim; Geng Chen; Weili Lin; Pew-Thian Yap; Dinggang Shen
Journal:  Med Image Comput Comput Assist Interv       Date:  2017-09-04

3.  A framework for multi-component analysis of diffusion MRI data over the neonatal period.

Authors:  Maximilian Pietsch; Daan Christiaens; Jana Hutter; Lucilio Cordero-Grande; Anthony N Price; Emer Hughes; A David Edwards; Joseph V Hajnal; Serena J Counsell; J-Donald Tournier
Journal:  Neuroimage       Date:  2018-11-02       Impact factor: 6.556

  3 in total

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