Literature DB >> 28070136

New Talaromyces species from indoor environments in China.

A J Chen1, B D Sun2, J Houbraken3, J C Frisvad4, N Yilmaz5, Y G Zhou2, R A Samson3.   

Abstract

Talaromyces contains both asexual and sexually reproducing species. This genus is divided in seven sections and currently has 105 accepted species. In this study we investigated the Talaromyces isolates that were obtained during a study of indoor air collected in Beijing, China. These indoor Talaromyces strains are resolved in four sections, seven of them are identified as T. islandicus, T. aurantiacus, T. siamensis and T. albobiverticillius according to BenA sequences, while 14 isolates have divergent sequences and are described here as nine new species. The new species are placed in four sections, namely sections Helici, Islandici, Talaromyces and Trachyspermi. They are described based on sequence data (ITS, BenA, CaM and RPB2) in combination with phenotypic and extrolite characters. Morphological descriptions and notes for distinguishing similar species are provided for each new species. The recently described T. rubrifaciens is synonymised with T. albobiverticillius based on presented phylogenetic results.

Entities:  

Keywords:  Eurotiales; Indoor air; Polyphasic taxonomy; T. adpressus A.J. Chen, Frisvad & Samson; T. beijingensis A.J. Chen, Frisvad & Samson; T. cerinus A.J. Chen, Frisvad & Samson; T. chlamydosporus A.J. Chen, Frisvad & Samson; T. diversiformis A.J. Chen, Frisvad & Samson; T. fusiformis A.J. Chen, Frisvad & Samson; T. neorugulosus A.J. Chen, Frisvad & Samson; T. reverso-olivaceus A.J. Chen, Frisvad & Samson; Talaromyces aerius A.J. Chen, Frisvad & Samson; Talaromyces albobiverticillius

Year:  2016        PMID: 28070136      PMCID: PMC5219591          DOI: 10.1016/j.simyco.2016.11.003

Source DB:  PubMed          Journal:  Stud Mycol        ISSN: 0166-0616            Impact factor:   16.097


Introduction

The genus Talaromyces was introduced by Benjamin (1955) to accommodate teleomorphic Penicillium species with soft ascomata, which are usually white or yellowish and surrounded by multiple layers of interwoven hyphae. Phylogenetic studies revealed that Penicillium was polyphyletic and Talaromyces species and members of Penicillium subgenus Biverticillium belonged in a clade distinct from Penicillium sensu stricto (LoBuglio et al., 1993, LoBuglio and Taylor, 1993, Berbee et al., 1995, Ogawa et al., 1997, Ogawa and Sugiyama, 2000, Wang and Zhuang, 2007, Houbraken and Samson, 2011). Following the concept of nomenclatural priority and single name nomenclature, Samson subsequently transferred all accepted species of Penicillium subgenus Biverticillium to Talaromyces. Yilmaz studied the taxonomy of Talaromyces in detail using a polyphasic approach. Based on multigene phylogeny, morphology and extrolites, 88 species were accepted and divided into seven sections: Bacillispori, Helici, Islandici, Purpurei, Subinflati, Talaromyces and Trachyspermi. Visagie added five new species with ampulliform-like phialides to section Talaromyces. Later, Yilmaz resolved the taxonomy within section Islandici using a polyphasic approach and introduced four new species, T. acaricola, T. crassus, T. infraolivaceus and T. subaurantiacus. In the same year, eight new species, T. amazonensis, T. columbiensis, T. francoae, T. neofusisporus, T. purgamentorum, T. qii, T. rubrifaciens and T. systylus, were described from Argentina, China and Colombia (Luo et al., 2016, Romero et al., 2016, Wang et al., 2016, Yilmaz et al., 2016a). In the last decades the interest in indoor mycobiota has grown because of their adverse health effects in humans (Samson et al., 1994, Prezant et al., 2008, Flannigan et al., 2011, Adan and Samson, 2011). Samson listed 100 common indoor fungal species which belong to 47 genera. Talaromyces funiculosus, T. rugulosus and T. wortmanii are among the most frequently encountered species in indoor environments. Visagie analysed Talaromyces species from dust samples collected from nine countries, and based on ITS and BenA sequences, 18 Talaromyces species were identified including three new species: T. oumae-annae, T. sayulitensis and T. yelensis. Various studies investigated the mycobiota of indoor environments in China. However, most surveys focused on total fungal counts and identified fungi to genera or species level based on phenotypic characters (Wu et al., 1982, Wu et al., 2000, Fang et al., 2005, Li et al., 2006, Si et al., 2007, Liu et al., 2014). Molecular based identifications are occasionally being performed and Luo reported T. rubrifaciens as a new taxon from heating, ventilation and air conditioning systems in China. During surveys of the mycobiota of indoor air in Beijing, China, numerous strains belonging to Aspergillus, Cladosporium, Chaetomium, Penicillium and other genera were isolated. Among them, 14 Talaromyces isolates could not be assigned to any described species. These strains are described here as nine new species based on multi-gene phylogenies based partial ITS, β-tubulin (BenA), calmodulin (CaM) and RNA polymerase II second largest subunit (RPB2) gene sequences, phenotype and extrolite data.

Material and methods

Isolates

Isolates used in this study were collected by the sedimentation plate method on various media in the vicinity of air-conditioning exhausts. These strains were subsequently deposited in the China General Microbiological Culture Collection Centre (CGMCC), Beijing, China. In addition, isolates from the culture collection of CBS-KNAW Fungal Biodiversity Centre (CBS), Utrecht, the Netherlands, and working collection of the Applied and Industrial Mycology department (DTO) housed at CBS-KNAW were used. An overview of strains is given in Table 1. For other strains used in the phylogenetic analyses, readers are referred to Yilmaz et al., 2014, Yilmaz et al., 2016a, Yilmaz et al., 2016b, Visagie et al., 2014, Visagie et al., 2015, Luo et al., 2016, Romero et al., 2016, and Wang .
Table 1

Indoor Talaromyces strains used in this study.

Species nameSectionStrain no.GenBank accession nr.
ITSBenACaMRPB2
Talaromyces diversiformisHeliciCBS 141931T = CGMCC3.18204 = DTO 317-E3KX961215KX961216KX961259KX961274
T. reverso-olivaceusHeliciCBS 140672T = CGMCC3.18195 = DTO 317-C3KU866646KU866834KU866730KU866990
T. reverso-olivaceusHeliciCGMCC3.18216 = DTO 318-G2KU866660KU866847KU866744KU867004
T. cerinusIslandiciCBS 140622T = CGMCC3.18212 = DTO 318-A2KU866658KU866845KU866742KU867002
T. chlamydosporusIslandiciCBS 140635T = CGMCC3.18199 = DTO 317-D5KU866648KU866836KU866732KU866992
T. islandicusIslandiciCGMCC3.18196 = DTO 317-C5KX961217
T. neorugulosusIslandiciCBS 140623T = CGMCC3.18215 = DTO 318-A8KU866659KU866846KU866743KU867003
T. adpressusTalaromycesCBS 140620T = CGMCC3.18211 = DTO 317-G4KU866657KU866844KU866741KU867001
T. aurantiacusTalaromycesCGMCC3.18198 = DTO 317-C9KX961218
T. beijingensisTalaromycesCBS 140617T = CGMCC3.18200 = DTO 317-D8KU866649KU866837KU866733KU866993
T. beijingensisTalaromycesCGMCC3.18201 = DTO 317-D9KU866650KU866838KU866734KU866994
T. beijingensisTalaromycesCGMCC3.18202 = DTO 317-E1KU866651KU866839KU866735KU866995
T. beijingensisTalaromycesCBS 140619 = CGMCC3.18208 = DTO 317-E9KU866654KU866841KU866738KU866998
T. fusiformisTalaromycesCBS 140637T = CGMCC3.18210 = DTO 317-F4KU866656KU866843KU866740KU867000
T. fusiformisTalaromycesCBS 140636 = CGMCC3.18209 = DTO 317-F3KU866655KU866842KU866739KU866999
T. siamensisTalaromycesCGMCC3.18214 = DTO 318-B6KX961219
T. aeriusTrachyspermiCBS 140611T = CGMCC3.18197 = DTO 317-C7KU866647KU866835KU866731KU866991
T. albobiverticilliusTrachyspermiCGMCC3.18203 = DTO 317-E2KX961222
T. albobiverticilliusTrachyspermiCGMCC3.18205 = DTO 317-E4KX961220
T. albobiverticilliusTrachyspermiCGMCC3.18206 = DTO 317-E5KX961221
T. albobiverticilliusTrachyspermiCGMCC3.18207 = DTO 317-E6KX961223

DNA extraction, PCR amplification and sequencing

Strains were grown for 1 wk on malt extract agar (MEA, Oxoid malt) prior to DNA extraction. DNA was extracted using the Ultraclean™ Microbial DNA isolation Kit (MoBio, Solana Beach, U.S.A.) and stored at −20 °C. The ITS, BenA, CaM, and RPB2 genes were amplified and sequenced using methods and primers previously described (Houbraken and Samson, 2011, Yilmaz et al., 2014).

Phylogenetic analysis

A multi-gene phylogeny combining ITS, BenA, CaM and RPB2 sequences was used to accommodate the new species of Talaromyces in the different sections. Prior combining the datasets, single gene alignments were generated with MAFFT v. 7 (Katoh & Standley 2013), and then trimmed at both ends. Aligned datasets were subsequently concatenated using Mesquite v 3.1 (Maddison & Maddison 2016). For each section, single gene phylogenies were generated to determine the phylogenetic relationship among species. The most suitable substitution model was determined using FindModel (Posada & Crandall 1998). Bayesian analyses were performed with MrBayes v. 3.1.2 (Ronquist & Huelsenbeck 2003). The sample frequency was set to 100 and the first 25 % of trees were removed as burn-in. Maximum likelihood analyses including 500 bootstrap replicates were run using RAxML BlackBox web-server (Gamma model of rate heterogeneity) (Stamatakis ). Trichocoma paradoxa (CBS 788.83T) was used as an outgroup in the Talaromyces phylogeny. Sequences of T. ucrainicus (CBS 162.67T), T. subinflatus (CBS 652.95T), T. dendriticus (CBS 660.80T) and T. purpurogenus (CBS 286.36T) were used as outgroups in the Talaromyces sections Helici, Islandici, Talaromyces and Trachyspermi respectively. The resulting trees were visualised with FigTree v1.4.2 and edited in Adobe Illustrator CS5. Bayesian inference (BI) posterior probabilities (pp) values and bootstrap (bs) values are labelled on nodes. Values less than 0.95 pp and 70 % bs are not shown. Branches with posterior probability values of 1 and bootstrap values higher than 95 % are thickened. Newly obtained sequences were deposited in GenBank.

Morphological analysis

Macroscopic characters were studied on Czapek yeast autolysate agar (CYA), CYA supplemented with 5 % NaCl (CYAS), yeast extract sucrose agar (YES), creatine sucrose agar (CREA), dichloran 18 % glycerol agar (DG18), oatmeal agar (OA) and malt extract agar (MEA; Oxoid malt) (Samson ). Isolates were inoculated at three points on 90 mm Petri dishes and incubated for 7 d at 25 °C in darkness. Additional CYA plates were incubated at 30 and 37 °C, while additional MEA plates were incubated at 30 °C. After 7 d of incubation, colony diameters were recorded. The colony texture, degree of sporulation, obverse and reverse colony colours, the production of soluble pigments and exudates were noted. Acid production on CREA is indicated by a change in the pH sensitive bromocresol purple dye, from a purple to yellow colour in media surrounding colonies. For ascoma production, OA, MEA and CYA plates were incubated for up to four weeks. Microscope preparations were made from 1 wk old colonies grown on MEA and ascomata, asci and ascospores were observed on OA. Lactic acid (60 %) was used as mounting fluid and 96 % ethanol was applied to remove the excess of conidia. A Zeiss Stereo Discovery V20 dissecting microscope and Zeiss AX10 Imager A2 light microscope equipped with Nikon DS-Ri2 cameras and software NIS-Elements D v4.50 were used to capture digital images.

Extrolites analysis

For extrolite extractions, three agar plugs (6 mm diam) were taken from colonies grown on CYA and YES (incubated for 1 wk at 25 °C), and combined in one Eppendorf vial. In addition, three plugs were taken from colonies grown on OA and Blakeslee's MEA (Blakeslee 1915), and combined in another Eppendorf vial. The plugs were ultrasonicated in ethylacetate/isopropanol (3:1) with 1 % formic acid for 50 min. After extraction, the liquid was transferred to another Eppendorf vial and thereafter evaporated. The remaining dry fraction was redissolved in 300 μl methanol and ultrasonicated for 10 min. The extract was centrifuged at 13 400 rpm in an Eppendorf centrifuge (Minispin), transferred to a V-formed vial with a 300 μl capacity, and subsequently injected into an Ultra high performance liquid chromatograph (UHPLC) via an autosampler. The Liquid chromatograph was a Dionex Ultimate 3000 UHPLC connected to a Dionex 3000 RS Diode array detector and an Agilent 1321A fluorescence detector. The column used was a Poroshell Phenyl hexyl 120 (100 mm × 2.1 mm) column with 2.7 μm particles (Agilent). The UHPLC gradient, injection volume and other conditions are given in Klitgaard . Standards of rugulosin, skyrin, rugulovasine, duclauxin and other Talaromyces derived extrolites were used as standards in the comparison of retention times and UV spectra.

Results

Phylogeny

The phylogenetic relationships among the species in Talaromyces were studied using concatenated sequence data of four loci, ITS, BenA, CaM and RPB2. The total length of the aligned dataset was 2420 characters, and the single gene datasets consisted of 500, 493, 624 and 803 characters for ITS, BenA, CaM and RPB2 respectively. The most optimal models for the concatenated and the single gene phylogenies are shown in Table 2. The multi-gene analysis reveals the presence of seven well-supported lineages in Talaromyces (Fig. 1), and these lineages correspond with sections Bacillispori, Helici, Islandici, Purpurei, Subinflati, Talaromyces, and Trachyspermi. Our indoor Talaromyces strains are resolved in four sections, seven of them are identified as T. islandicus, T. aurantiacus, T. siamensis and T. albobiverticillius based on BenA sequences, while 14 of them are described as nine new species: T. diversiformis and T. reverso-olivaceus in section Helici, T. chlamydosporus, T. cerinus and T. neorugulosus in section Islandici, T. beijingensis, T. fusiformis and T. adpressus in section Talaromyces, and T. aerius in section Trachyspermi.
Table 2

Sequence data sets and models used in phylogeny.

SectionSequence data sets
ITS (bp)Substitution modelBenA (bp)Substitution modelCaM (bp)Substitution modelRPB2 (bp)Substitution model
Overview Talaromyces500GTR+G493GTR+G624K2P+G803GTR+G
Section Helici464HKY+G427HKY+G550GTR+G852GTR+G
Section Islandici502GTR+G474GTR+G458K2P+G803GTR+G
Section Talaromyces469GTR+G402HKY+G523GTR+G779HKY+G
Section Trachyspermi478GTR+G388HKY+G491K2P+G680GTR+G
Fig. 1

Concatenated phylogeny of the ITS, BenA, CaM and RPB2 gene regions of species from Talaromyces. Branches with 1 pp and bootstrap support values of more than 95 % are thickened. Trichocoma paradoxa was chosen as outgroup. Indoor isolates were marked with yellow star.

Talaromyces diversiformis and T. reverso-olivaceus, both belonging to section Helici are in the combined analysis related with T. aerugineus and T. boninensis, respectively (Fig. 1). Talaromyces reverso-olivaceus is in the BenA, CaM and RPB2 analysis is a sister species of T. boninensis (>0.98 pp; >89 % bs). The phylogenetic relationship of T. diversiformis is more difficult to determine based on the single gene phylograms and this species appears to be related to T. aerugineus and T. bohemicus in the BenA, CaM and RPB2 phylograms (>0.98 pp; >70 % bs). The ITS phylogram is poorly resolved. The T. reverso-olivaceus isolates cluster together (1 pp; 98 % bs) and these isolates are on a well-supported branch together with T. helicus and T. boninensis. The relationship of T. diversiformis is unresolved in the ITS phylogram (Fig. 2, Suppl. 1–3). Talaromyces chlamydosporus and T. cerinus are both members of section Islandici and are, with exception in the CaM analysis, related with high statistical support to T. subaurantiacus (Fig. 1, Fig. 3, Suppl. 4–6). The multi-gene phylogeny and the ITS and RPB2 phylograms show that T. neorugulosus is most closely related to T. rugulosus. This species is unresolved in the CaM analysis, and related to T. rugulosus, T. infraolivaceus, T. atricola and T. acaricola in the BenA phylogram (Fig. 3, Suppl. 4–6). Strains of T. beijingensis cluster together in a single clade, separate from other sect. Talaromyces species. The relationship of this species with other species is in all analysis (including the combined analysis) unresolved. Both strains of T. fusiformis form a single, separate clade in the four gene phylogenies, and they are a sister clade of T. aurantiacus. Talaromyces adpressus is in BenA phylogeny with statistical support related to T. sayulitensis (0.99 pp; 98 % bs), while it clusters with T. pinophilus in the CaM (1.00 pp; 98 % bs). The RPB2 sequence of T. sayulitensis is unavailable thus cannot be compared here (Fig. 4, Suppl. 7–9). In section Trachyspermi, T. aerius clusters with statistical support with T. solicola in the three (CaM, ITS and RPB2) of the four single gene phylogenies (Fig. 5, Suppl. 10–12).
Fig. 2

Phylogeny of BenA for species classified in Talaromyces section Helici. Branches with 1 pp and bootstrap support values of more than 95 % are thickened. Talaromyces ucrainicus was chosen as outgroup. Indoor isolates were marked with yellow star.

Fig. 3

Phylogeny of BenA for species classified in Talaromyces section Islandici. Branches with 1 pp and bootstrap support values of more than 95 % are thickened. Talaromyces subinflatus was chosen as outgroup. Indoor isolates were marked with yellow star.

Fig. 4

Phylogeny of BenA for species classified in Talaromyces section Talaromyces. Branches with 1 pp and bootstrap support values of more than 95 % are thickened. Talaromyces dendriticus was chosen as outgroup. Indoor isolates were marked with yellow star.

Fig. 5

Phylogeny of BenA for species classified in Talaromyces section Trachyspermi. Branches with 1 pp and bootstrap support values of more than 95 % are thickened. Talaromyces purpurogenus was chosen as outgroup. Indoor isolates were marked with yellow star. a indicates isolates previously identified as T. rubrifaciens.

Identification

All nine new species described here can be identified via BenA, CaM and RPB2 sequences. Seven of them have unique ITS sequences. Talaromyces neorugulosus cannot be separated from T. rugulosus (strain CBS 285.37 and CBS 378.48) by its ITS sequence. Talaromyces diversiformis is similar to T. aerugineus (99.8 % similarity, 447/448 bp) and T. ryukyuensis (99.1 % similarity, 445/449 bp) by ITS sequences.

Taxonomy

A.J. Chen, Frisvad & Samson, sp. nov. MycoBank MB817398. Fig. 6.
Fig. 6

Morphological characters of Talaromyces aerius. A. Colonies from left to right (top row) CYA, MEA, YES and OA; (bottom row) CYA reverse, MEA reverse, DG 18 and CREA; B–F. conidiophores; G. Conidia. Scale bars = 10 μm.

Etymology: Latin, aerius refers to its origin, isolated from indoor air. Diagnosis: This species produces smooth, ellipsoidal conidia; does not produce red pigments or red exudates on any of the used media. In: Talaromyces section Trachyspermi Typus: China, Beijing, indoor air, May 2014, isolated by B.D. Sun (holotype CBS H-22506, culture ex-type CBS 140611 = CGMCC3.18197 = DTO 317-C7). ITS barcode: KU866647. (Alternative markers: BenA = KU866835; CaM = KU866731; RPB2 = KU866991). Colony diam, 7 d (mm): CYA 17–18; CYA 30 °C 20–22; CYA 37 °C No growth; MEA 32–33; MEA 30 °C 34–36; DG18 11–12; CYAS 2–3; OA 28–30; CREA 2–4; YES 21–22. Colony characters: CYA, 25 °C, 7 d: Colonies moderately deep, crateriform; margins entire; mycelium white; texture floccose; sporulation sparse, conidia en masse greyish green to olive green; soluble pigments absent; exudates absent; reverse saffron. MEA, 25 °C, 7 d: Colonies low, plane; margins entire; mycelium white; texture velvety; sporulation dense, conidia en masse greyish green; soluble pigments absent; exudates absent; reverse saffron. YES, 25 °C, 7 d: Colonies moderately deep, raise at centre, cricoid; margins entire; mycelium white; texture floccose; sporulation dense, conidia en masse olive green to greyish green; soluble pigments absent; exudates absent; reverse greyish olive. DG18, 25 °C, 7 d: Colonies moderately deep, raise at centre, slightly sulcate; margins entire; mycelium rosy buff; texture floccose; sporulation sparse, conidia en masse greyish green; soluble pigments absent; exudates absent; reverse brown at centre, cream white at edge. OA, 25 °C, 7 d: Colonies low, plane; margins entire; mycelium white and light yellow; texture velvety; sporulation dense, conidia en masse greyish green to yellow green; soluble pigments absent; exudates absent; reverse purplish red at centre, yellowish brown at edge. CREA, 25 °C, 7 d: Acid production absent. Micromorphology: Conidiophores biverticillate, sometimes with extra subterminal branches; stipes smooth, 70–130 × 3–4 μm, extra branches 22–34 μm; metulae 3–5, divergent, 8–14 × 3–4 μm; phialides 4–6, acerose, 9–12 × 2–4 μm; conidia smooth, ellipsoidal, 2–3.5(–4.5) × 2–3 μm. Ascomata not observed. Extrolites: Mitorubrinic acid. Distinguishing characters: Talaromyces aerius is phylogenetically related to T. solicola, T. albobiverticillius and T. erythromellis. Talaromyces solicola produces rough conidia, T. albobiverticillius produces intense red soluble pigment on CYA and T. erythromellis grows restrictedly on CYA, MEA, YES and OA, and produces red exudates on MEA. A.J. Chen, Frisvad & Samson, sp. nov. MycoBank MB817397. Fig. 7.
Fig. 7

Morphological characters of Talaromyces adpressus. A. Colonies from left to right (top row) CYA, MEA, YES and OA; (bottom row) CYA reverse, MEA reverse, DG 18 and CREA; B–F. Conidiophores; G. Conidia. Scale bars = 10 μm.

Etymology: Latin, adpressus refers to its appressed metulae. Diagnosis: This species produces white mycelium on MEA and OA; does not produce acid compounds on CREA and produces smooth, subglobose to ellipsoidal conidia measuring 2.5–4.5(–5) × 2–3.5 μm. In: Talaromyces section Talaromyces Typus: China, Beijing, indoor air, May 2014, isolated by B.D. Sun (holotype CBS H-22507, culture ex-type CBS 140620 = CGMCC3.18211 = DTO 317-G4). ITS barcode: KU866657. (Alternative markers: BenA = KU866844; CaM = KU866741; RPB2 = KU867001). Colony diam, 7 d (mm): CYA 32–33; CYA 30 °C 45–46; CYA 37 °C 35–38; MEA 42–43; MEA 30 °C 57–58; DG18 11–12; CYAS 1–2; OA 41–42; CREA 21–22; YES 42–43. Colony characters: CYA, 25 °C, 7 d: Colonies moderately deep, slightly sulcate; margins entire; mycelium white to buff, orange hyphae present at centre; texture floccose; sporulation sparse, conidia en masse greyish green; soluble pigments absent; exudates light droplets; reverse yellowish brown. MEA, 25 °C, 7 d: Colonies moderately deep, plane; margins entire; mycelium white; texture loosely funiculose to floccose; sporulation dense, conidia en masse greyish green; soluble pigments absent; exudates clear droplets; reverse yellowish brown. YES, 25 °C, 7 d: Colonies moderately deep, slightly sulcate; margins entire; white hyphae predominant, light coral red hyphae present; texture floccose; sporulation moderately dense, conidia en masse greyish green; soluble pigments absent; exudates absent; reverse brown at centre, pale brown at edge. DG18, 25 °C, 7 d: Colonies moderately deep, plane; margins entire; mycelium white; texture floccose; sporulation sparse, conidia en masse pale green; soluble pigments absent; exudates absent; reverse light yellow at centre, cream white at edge. OA, 25 °C, 7 d: Colonies moderately deep, plane, margins entire; mycelium white; texture floccose; sporulation dense, conidia en masse greyish green; soluble pigments absent; exudates clear droplets; reverse pale buff. CREA, 25 °C, 7 d: Acid production present. Micromorphology: Conidiophores biverticillate; stipes smooth, 100–200 × 3–4.5 μm; metulae 3–5, appressed, 10–15 × 3–4.5 μm; phialides 3–5, acerose, 9–14 × 2.5–3.5 μm; conidia smooth, subglobose to ellipsoidal, 2.5–4.5(–5) × 2–3.5 μm. Ascomata not observed. Extrolites: Duclauxin, rugulovasine A. Distinguishing characters: Talaromyces adpressus is closely related to T. sayulitensis and T. pinophilus; however, the latter two species produce large amounts of acid compounds on CREA. The micromorphology of these three species is identical, but they can be phylogenetically distinguished. A.J. Chen, Frisvad & Samson, sp. nov. MycoBank MB817395. Fig. 8.
Fig. 8

Morphological characters of Talaromyces beijingensis. A. Colonies from left to right (top row) CYA, MEA, YES and OA; (bottom row) CYA reverse, MEA reverse, DG 18 and CREA; B–F. Conidiophores; G. Conidia. Scale bars = 10 μm.

Etymology: Latin, beijingensis refers to its origin, isolated from Beijing, China. Diagnosis: This species grows moderately on CYA and MEA, the colony reverse on CYA and MEA is peach coloured, and it produces smooth, subglobose to fusiform conidia. In: Talaromyces section Talaromyces Typus: China, Beijing, indoor air, May 2014, isolated by B.D. Sun. (holotype CBS H-22508, culture ex-type CBS 140617 = CGMCC3.18200 = DTO 317-D8). ITS barcode: KU866649. (Alternative markers: BenA = KU866837; CaM = KU866733; RPB2 = KU866993). Colony diam, 7 d (mm): CYA 27–28; CYA 30 °C 36–37; CYA 37 °C 26–28; MEA 35–39; MEA 30 °C 45–52; DG18 10–11; CYAS Weak growth; OA 34–37; CREA 19–20; YES 25–26. Colony characters: CYA, 25 °C, 7 d: Colonies moderately deep, plane; margins entire; mycelium white; texture velvety; sporulation dense, conidia en masse yellow green to greyish green; soluble pigments absent; exudates clear droplets; reverse peach fading into rosy buff. MEA, 25 °C, 7 d: Colonies moderately deep, plane; margins entire; mycelium white; texture velvety; sporulation dense, conidia en masse dark green; soluble pigments absent; exudates clear droplets; reverse peach fading into yellowish brown. YES, 25 °C, 7 d: Colonies moderately deep, slightly sulcate; margins entire; mycelium white; texture velvety; sporulation dense, conidia en masse greyish green to dark green; soluble pigments absent; exudates absent; reverse orange brown. DG18, 25 °C, 7 d: Colonies moderately deep, plane; margins entire; mycelium white; texture floccose; sporulation sparse, conidia en masse greyish green; soluble pigments absent; exudates absent; reverse brown to light yellow at centre, cream white at edge. OA, 25 °C, 7 d: Colonies moderately deep, plane; margins entire; mycelium white; texture velvety to floccose; sporulation dense, conidia en masse dark green; soluble pigments absent; exudates clear droplets; reverse orange brown. CREA, 25 °C, 7 d: Acid production present. Micromorphology: Conidiophores biverticillate, with symmetrical subterminal branches; stipes smooth, 91–175 × 3–4 μm, extra branches 18–20 μm; metulae 3–4, appressed, 11–14 × 2–4 μm; phialides 2–4, acerose, 9–12 × 2–3 μm; conidia smooth, ellipsoidal to fusiform, 3–4 × 2–3 μm. Ascomata not observed. Extrolites: Duclauxin. Distinguishing characters: Phylogenetically T. beijingensis belongs to section Talaromyces, but it cannot be assigned to any section members. Morphologically this species resembles T. flavovirens in having moderately growing, velvety, yellow green to greyish green colonies on CYA and MEA, biverticillate conidiophores and ellipsoidal to fusiform conidia. Talaromyces flavovirens can be differentiated by the production of synnemata (up to 750 μm) and yellow mycelium. A.J. Chen, Frisvad & Samson, sp. nov. MycoBank MB817393. Fig. 9.
Fig. 9

Morphological characters of Talaromyces cerinus. A. Colonies from left to right (top row) CYA, MEA, YES and OA; (bottom row) CYA reverse, MEA reverse, DG 18 and CREA; B–F. Conidiophores; G. Conidia. Scale bars = 10 μm.

Etymology. Latin, cerinus refers to its yellow mycelium on MEA. Diagnosis: This species produces yellow mycelium on MEA and orange centred reverse on CYA, does not grow on CYA at 37 °C. In: Talaromyces section Islandici Typus: China, Beijing, indoor air, May 2014, isolated by B.D. Sun (holotype CBS H-22513, culture ex-type CBS 140622 = CGMCC3.18212 = DTO 318-A2). ITS barcode: KU866658. (Alternative markers: BenA = KU866845; CaM = KU866742; RPB2 = KU867002). Colony diam, 7 d (mm): CYA 17–18; CYA 30 °C 20–21; CYA 37 °C No growth; MEA 19–20; MEA 30 °C 25–26; DG18 12–13; CYAS 10–11; OA 17–19; CREA 2–3; YES 19–21. Colony characters: CYA, 25 °C, 7 d: Colonies moderately deep, plane; margins entire; mycelium white to buff; texture floccose; sporulation dense, conidia en masse greyish green; soluble pigments absent; exudates absent; reverse orange at centre, saffron at edge. MEA, 25 °C, 7 d: Colonies moderately deep, slightly sulcate; margins entire; mycelium yellow at centre; texture floccose; sporulation moderately dense, conidia en masse yellow green; soluble pigments absent; exudates clear droplets; reverse saffron. YES, 25 °C, 7 d: Colonies moderately deep, plane; margins entire; mycelium white; texture velvety; sporulation dense, conidia en masse greyish green; soluble pigments absent; exudates absent; reverse orange at centre, cream white at edge. DG18, 25 °C, 7 d: Colonies moderately deep, plane; margins entire; mycelium white to buff; texture velvety; sporulation dense, conidia en masse greyish green; soluble pigments absent; exudates absent; reverse cream white. OA, 25 °C, 7 d: Colonies moderately deep, plane; margins entire; mycelium white and light yellow; texture floccose; sporulation sparse, conidia en masse yellow green; soluble pigments absent; exudates clear droplets; reverse cream white. CREA, 25 °C, 7 d: Acid production absent. Micromorphology: Conidiophores biverticillate, stipes smooth, 50–100 × 2.5–4 μm; metulae 3–5, 8–11 × 2.5–4 μm; phialides 3–7, acerose, 9–11(–14) × 2–3 μm; conidia smooth, ellipsoidal to fusiform, 2.5–4 × 2–3 μm. Ascomata not observed. Extrolites: Emodin, mitorubrin, mitorubrinol, rugulosin, rugulovasine A, skyrin. Distinguishing characters: Talaromyces cerinus resembles T. subaurantiacus and T. chlamydosporus, but T. subaurantiacus produces orange mycelium on CYA and MEA, and T. chlamydosporus produces globose to subglobose swollen cells resembling chlamydospores. In addition, T. cerinus does not grow on CYA at 37 °C. A.J. Chen, Frisvad & Samson, sp. nov. MycoBank MB817392. Fig. 10.
Fig. 10

Morphological characters of Talaromyces chlamydosporus. A. Colonies from left to right (top row) CYA, MEA, YES and OA; (bottom row) CYA reverse, MEA reverse, DG 18 and CREA; B–F. Conidiophores; G. Conidia. Scale bars = 10 μm.

Etymology: Latin, chlamydosporus refers to the globose to subglobose swollen cells resembling chlamydospores. Diagnosis: This species grows restrictedly on CYA and MEA, reaches 3–4 mm on CYA at 37 °C after 7 days, and produces globose to subglobose swollen cells resembling chlamydospores. In: Talaromyces section Islandici Typus: China, Beijing, indoor air, May 2014, isolated by B.D. Sun (holotype CBS H-22509, culture ex-type CBS 140635 = CGMCC 3.18199 = DTO 317-D5). ITS barcode: KU866648. (Alternative markers: BenA = KU866836; CaM = KU866732; RPB2 = KU866992). Colony diam, 7 d (mm): CYA 12–13; CYA 30 °C 12–13; CYA 37 °C 3–4; MEA 18–19; MEA 30 °C 17–18; DG18 9–11; CYAS 9–10; OA 15–16; CREA 3–4; YES 16–17. Colony characters: CYA, 25 °C, 7 d: Colonies moderately deep, raised at centre, plane; margins entire; mycelium buff; texture velvety; sporulation moderately dense, conidia en masse olive green to greyish green; soluble pigments absent; exudates absent; reverse orange at centre, yellowish brown at edge. MEA, 25 °C, 7 d: Colonies moderately deep, slightly sulcate; margins slightly irregular; mycelium white; texture floccose; sporulation moderately dense, conidia en masse blue green; soluble pigments absent; exudates clear droplets; reverse yellowish brown. YES, 25 °C, 7 d: Colonies moderately deep, slightly sulcate; margins entire; mycelium white; texture velvety; sporulation moderately dense, conidia en masse greyish green; soluble pigments absent; exudates absent; reverse yellowish brown. DG18, 25 °C, 7 d: Colonies moderately deep, plane; margins entire; mycelium light yellow; texture velvety; sporulation moderately dense, conidia en masse greyish green; soluble pigments absent; exudates absent; reverse yellowish brown. OA, 25 °C, 7 d: Colonies moderately deep, plane; margins entire; mycelium white; texture velvety; sporulation moderately dense, conidia en masse yellow green; soluble pigments absent; exudates absent; reverse yellowish brown. CREA, 25 °C, 7 d: Acid production absent. Micromorphology: Conidiophores biverticillate; stipes smooth, 50–250 × 2.5–4 μm; metulae 3–5, appressed, sometimes irregularly swollen, 9–14 × 2–4(–6) μm; phialides 3–5, acerose, 9–14 × 2–3 μm; conidia smooth, ellipsoidal to fusiform, 2.5–4 × 1.5–3 μm. Swollen cells resembling chlamydospores globose to subglobose, 5–7 μm; Ascomata not observed. Extrolites: Mitorubrin, mitorubrinol, mitorubrinol acetate, rugulosin, rugulovasin A & B, skyrin. Distinguishing characters: Talaromyces chlamydosporus grows restrictedly and produce compact colonies on CYA and MEA, and can produce globose to subglobose swollen cells. These characters distinguish it from the closely related T. subaurantiacus and T. cerinus. A.J. Chen, Frisvad & Samson, sp. nov. MycoBank MB818696. Fig. 11.
Fig. 11

Morphological characters of Talaromyces diversiformis. A. Colonies from left to right (top row) CYA, MEA, YES and OA; (bottom row) CYA reverse, MEA reverse, DG 18 and CREA; B–F. Conidiophores; G. Conidia. Scale bars = 10 μm.

Etymology: Latin, diversiformis refers to its diverse conidiophore branches. Diagnosis: This species produces solitary phialides, biverticillate conidiophores, which have in some cases extra subterminal branches. This species furthermore produces large, ellipsoidal to fusiform conidia measuring 4–6(–8) × 2–4 μm. In: Talaromyces section Helici Typus: China, Beijing, indoor air, May 2014, isolated by B.D. Sun (holotype CBS H-22841, culture ex-type CBS 141931 = CGMCC 3.18204 = DTO 317-E3). ITS barcode: KX961215. (Alternative markers: BenA = KX961216; CaM = KX961259; RPB2 = KX961274). Colony diam, 7 d (mm): CYA 13–14; CYA 30 °C 14–16; CYA 37 °C 17–19; MEA 45–48; MEA 30 °C 56–57; DG18 5–6; CYAS No growth; OA 52–53; CREA No growth; YES 22–24. Colony characters: CYA, 25 °C, 7 d: Colonies moderately deep, plane; margins entire; mycelium white; texture floccose; sporulation moderately dense, conidia en masse blue green; soluble pigments absent; exudates absent; reverse yellowish brown fading into greyish green. MEA, 25 °C, 7 d: Colonies moderately deep, plane; margins entire; mycelium white; texture velvety; sporulation dense, conidia en masse greyish green; soluble pigments absent; exudates absent; reverse dark olive green fading into yellowish brown. YES, 25 °C, 7 d: Colonies moderately deep, plane; margins entire; mycelium white; texture funiculose; moderately dense, conidia en masse blue green, soluble pigments absent; exudates absent; reverse yellowish green at centre, cream white at edge. DG18, 25 °C, 7 d: Colonies moderately deep, plane; margins entire; mycelium white; texture floccose; sporulation absent; soluble pigments absent; exudates absent; reverse cream white. OA, 25 °C, 7 d: Colonies moderately deep, plane; margins entire; mycelium white; texture velvety; sporulation dense, conidia en masse dark green; soluble pigments absent; exudates absent; reverse dark greenish glaucous. CREA, 25 °C, 7 d: No growth. Micromorphology: Conidiophores with solitary phialides, or biverticillate, or with extra subterminal branches; stipes smooth, 13–70 × 2.5–4 μm; metulae 2–3, 16–18 × 3–4 μm; phialides 1–3, flask shaped to acerose, (8–)16–18(–23) × 3–4.5 μm; conidia ellipsoidal to fusiform, smooth, 4–6(–8) × 2–4 μm. Ascomata not observed. Extrolites: no extrolites detected. Distinguishing characters: Talaromyces diversiformis is phylogenetically closely related to T. aerugineus and T. bohemicus. This species has, compared with T. aerugineus, more complex branched conidiophores. T. bohemicus produces light brown mycelium which turns to cinnamon brown (Fassatiová & Pêčková 1990). A.J. Chen, Frisvad & Samson, sp. nov. MycoBank MB817396. Fig. 12.
Fig. 12

Morphological characters of Talaromyces fusiformis. A. Colonies from left to right (top row) CYA, MEA, YES and OA; (bottom row) CYA reverse, MEA reverse, DG 18 and CREA; B–F. Conidiophores; G. Conidia. Scale bars = 10 μm.

Etymology: Latin, fusiformis refers to its fusiform conidia. Diagnosis: This species produces funiculose colonies on OA, does not grow on CREA, produces smooth, ellipsoidal to fusiform conidia measuring 3–4(–6) × 2–3 μm. In: Talaromyces section Talaromyces Typus: China, Beijing, indoor air, May 2014, isolated by B.D. Sun (holotype CBS H-22510, culture ex-type CBS 140637 = CGMCC3.18210 = DTO 317-F4). ITS barcode: KU866656. (Alternative markers: BenA = KU866843; CaM = KU866740; RPB2 = KU867000). Colony diam, 7 d (mm): CYA 28–29; CYA 30 °C 26–28; CYA 37 °C 24–25; MEA 37–38; MEA 30 °C 49–51; DG18 8–9; CYAS No growth; OA 39–40; CREA No growth; YES 30–31. Colony characters: CYA, 25 °C, 7 d: Colonies moderately deep, plane; margins entire; mycelium light yellow at centre; texture floccose; sporulation sparse, conidia en masse yellow green; soluble pigments absent; exudates light yellow droplets; reverse orange at centre, yellowish brown at edge. MEA, 25 °C, 7 d: Colonies moderately deep, plane; margins entire; mycelium white; texture loosely funiculose; sporulation dense, conidia en masse greyish green; soluble pigments absent; exudates clear droplets; reverse orange at centre, yellowish brown at edge. YES, 25 °C, 7 d: Colonies moderately deep, slightly sulcate; margins entire; mycelium light yellow at centre, white at edge; texture floccose; sporulation absent to sparse, conidia en masse pale green; soluble pigments absent; exudates light yellow droplets; reverse yellowish brown. DG18, 25 °C, 7 d: Colonies moderately deep, plane; margins entire; mycelium white; texture floccose; sporulation sparse, conidia en masse greyish green; soluble pigments absent; exudates absent; reverse white. OA, 25 °C, 7 d: Colonies deep, plane; margins entire; mycelium white, texture funiculose, sporulation dense, conidia en masse greyish green; soluble pigments absent; exudates clear droplets; reverse yellowish green. CREA, 25 °C, 7 d: No growth. Micromorphology: Conidiophores biverticillate, with symmetrical subterminal branches; stipes smooth, 42–70 × 2.5–4 μm, extra branches 28–37 μm; metulae 3–4, appressed, 12–15 × 2.5–4 μm; phialides 3–4, acerose, 11–15 × 2–3 μm; conidia smooth, ellipsoidal to fusiform, 3–4(–6) × 2–3 μm. Ascomata not observed. Extrolites: A purpactin, secalonic acid D, a chrodrimanin = thailandolide. Distinguishing characters: Talaromyces fusiformis is close to T. aurantiacus and T. funiculosus, but T. aurantiacus does not sporulate on CYA, MEA and YES and produces cylindrical to ellipsoidal conidia. T. funiculosus produces strong acid on CREA. A.J. Chen, Frisvad & Samson, sp. nov. MycoBank MB817394. Fig. 13.
Fig. 13

Morphological characters of Talaromyces neorugulosus. A. Colonies from left to right (top row) CYA, MEA, YES and OA; (bottom row) CYA reverse, MEA reverse, DG 18 and CREA; B–F. Conidiophores; G. Conidia. Scale bars = 10 μm.

Etymology: Latin, neorugulosus refers to its resemblance with T. rugulosus. Diagnosis: This species produces compact, velvety, olive green to dark green colony, produces globose, subglobose to ellipsoidal conidia measuring 3–4(–5) × 2–3(–4) μm, phylogenetically distinct from T. rugulosus. In: Talaromyces section Islandici Typus: China, Beijing, indoor air, May 2014, isolated by B.D. Sun (holotype CBS H-22511, culture ex-type CBS 140623 = CGMCC3.18215 = DTO 318-A8). ITS barcode: KU866659. (Alternative markers: BenA = KU866846; CaM = KU866743; RPB2 = KU867003). Colony diam, 7 d (mm): CYA 17–18; CYA 30 °C 20–21; CYA 37 °C No growth; MEA 19–20; MEA 30 °C 25–26; DG18 12–13; CYAS 10–11; OA 17–19; CREA 2–3; YES 19–21. Colony characters: CYA, 25 °C, 7 d: Colonies moderately deep, slightly sulcate; margins entire; mycelium light yellow; texture velvety; sporulation moderately dense, conidia en masse olive green; soluble pigments absent; exudates absent; reverse buff. MEA, 25 °C, 7 d: Colonies moderately deep, sulcate, crateriform, sunken at centre; margins entire; mycelium white; texture velvety; sporulation dense, conidia en masse dark green; soluble pigments absent; exudates clear droplets; reverse cinnamon. YES, 25 °C, 7 d: Colonies moderately deep, sulcate; margins entire; mycelium white; texture velvety; sporulation dense, conidia en masse greyish green to olive green; soluble pigments absent; exudates absent; reverse olive green to olive buff. DG18, 25 °C, 7 d: Colonies moderately deep, sunken at centre and crateriform; margins entire; mycelium light yellow; texture velvety; sporulation dense, conidia en masse greyish green to olive green; soluble pigments absent; exudates absent; reverse olive buff. OA, 25 °C, 7 d: Colonies moderately deep, plane; margins entire; mycelium white; texture floccose; sporulation dense, conidia en masse dark green; soluble pigments absent; exudates clear droplets; reverse cream white. CREA, 25 °C, 7 d: Acid production present. Micromorphology: Conidiophores biverticillate, sometimes with additional branches; stipes smooth, 15–100 × 2–4 μm, extra branches 14–30 μm; metulae 3–5, divergent, 8–14 × 3–4 μm; phialides 2–5, flask shaped, 7–12 × 2–4 μm; conidia smooth, globose, subglobose to ellipsoidal, 3–4(–5) × 2–3(–4) μm. Ascomata not observed. Extrolites: Ukulactones = pruginosins. Distinguishing characters: Talaromyces neorugulosus is close to T. rugulosus, T. atricola and T. scorteus. However, T. scorteus grows more restrictedly on CYA, MEA, YES and OA, T. atricola is characterised by floccose colonies and poor sporulation. Morphologically, T. neorugulosus resembles T. rugulosus and only small differences were found of the colony colour: T. rugulosus produces dull to dark green colonies on CYA, YES and DG18 and T. neorugulosus in shades of olive green. Phylogenetically, these two species can be distinguished by BenA, CaM and RPB2 sequences. A.J. Chen, Frisvad & Samson, sp. nov. MycoBank MB817391. Fig. 14.
Fig. 14

Morphological characters of Talaromyces reverso-olivaceus. A. Colonies from left to right (top row) CYA, MEA, YES and OA; (bottom row) CYA reverse, MEA reverse, DG 18 and CREA; B–F. Conidiophores; G. Conidia. Scale bars = 10 μm.

Etymology: Latin, reverso-olivaceus refers to the olive centred reverse. Diagnosis: This species produces olive green centred reverse on CYA and saffron reverse on MEA, produces ellipsoidal to fusiform, finely roughed conidia measuring 2.5–4.5 × 2.5–3 μm. In: Talaromyces section Helici Typus: China, Beijing, indoor air, May 2014, isolated by B.D. Sun (holotype CBS H-22512, culture ex-type CBS 140672 = CGMCC 3.18195 = DTO 317-C3). ITS barcode: KU866646. (Alternative markers: BenA = KU866834; CaM = KU866730; RPB2 = KU866990). Colony diam, 7 d (mm): CYA 19–23; CYA 30 °C 23–27; CYA 37 °C 18–20; MEA 34–37; MEA 30 °C 46–49; DG18 9–12; CYAS 4–6; OA 33–36; CREA No growth; YES 25–26. Colony characters: CYA, 25 °C, 7 d: Colonies moderately deep, sulcate, raised at centre; margins entire; mycelium white; texture floccose; sporulation moderately dense, conidia en masse greyish green; soluble pigments absent; exudates absent; reverse olive green at centre fading into white. MEA, 25 °C, 7 d: Colonies moderately deep, plane to light sulcate; margins entire; mycelium white; texture velvety to floccose; sporulation dense, conidia en masse blue green; soluble pigments absent; exudates absent; reverse saffron. YES, 25 °C, 7 d: Colonies moderately deep, sulcate; margins entire; mycelium white; texture floccose; sporulation sparse to moderately dense, conidia en masse blue green to greyish green; soluble pigments absent; exudates absent; reverse saffron. DG18, 25 °C, 7 d: Colonies moderately deep, plane; margins entire; mycelium white; texture floccose; sporulation absent to sparse, conidia en masse greyish green; soluble pigments absent; exudates absent; reverse dark green at centre fading into white. OA, 25 °C, 7 d: Colonies low, plane; margins entire; mycelium white; texture velvety; sporulation dense, conidia en masse dark green; soluble pigments absent; exudates absent; reverse light buff. CREA, 25 °C, 7 d: No growth. Micromorphology: Conidiophores biverticillate, sometimes with extra subterminal branches; stipes smooth, 50–100 × 2.5–4 μm; branches 12–15 × 2–3 μm; metulae 3–5, 10–13 × 3–4 μm; phialides 3–5, acerose, 10–12(–14) × 2.5–3 μm; conidia ellipsoidal to fusiform, finely roughed, 2.5–4.5 × 2.5–3 μm. Ascomata not observed. Extrolites: rugulovasine A. Distinguishing characters: Phylogenetically, Talaromyces reverso-olivaceus clusters in section Helici, related to T. boninensis and T. helicus. Talaromyces boninensis sporulates poorly on CYA and MEA, has a light orange reverse on CYA and white to orange reverse on MEA, and produces globose to subglobose ascospores. Talaromyces helicus produces greyish red to yellowish brown reverse on CYA, brownish orange reverse on MEA, and produces ellipsoidal ascospores. In addition, T. reverso-olivaceus produces finely roughed conidia, while T. boninensis and T. helicus produce smooth-walled conidia.

Discussion

The genus Talaromyces was recently monographed (Yilmaz ), accepting seven sections and 88 species. This study promoted the taxonomy of this genus, and since more than 17 new species were described (Visagie et al., 2015, Yilmaz et al., 2016a, Yilmaz et al., 2016b, Luo et al., 2016, Romero et al., 2016, Wang et al., 2016). In this study, Talaromyces isolates obtained from indoor air in China were studied. These isolates can be classified in four sections, and nine species are described here as new based on a polyphasic approach. Talaromyces section Helici includes two clades (Yilmaz ), and two of our new species fall into these two distinct clades. Talaromyces reverso-olivaceus clusters in the main clade containing T. helicus, T. boninensis and T. varians, and these species share the production of pigmented conidiophores. The other new species, T. diversiformis, clusters with the monoverticillate species T. aerugineus and T. bohemicus. This branching complexity of T. diversiformis is variable and both monoverticillate and biverticillate (occasionally with subterminal branches) conidiophores are observed. The majority of species belonging to Talaromyces section Islandici grow restrictedly on most media, produce yellow mycelium and characteristic mycotoxins (Yilmaz et al., 2014, Yilmaz et al., 2016b). The three new Islandici species grow restrictedly and produce yellow mycelium on DG18, confirming their relationship with other member of this section. Furthermore, T. neorugulosus produces pruginosins, and T. chlamydosporus and T. cerinus produce emodin, mitorubrin, mitorubrinol, rugulosin, skyrin and rugulovasine A. These extrolites are commonly shared by members of section Islandici. Besides shared characteristics, these species can also be distinguished based on morphological and physiological characters. Talaromyces chlamydosporus produces globose to subglobose swollen cells resembling chlamydospores and T. cerinus does not grow on CYA incubated at 37 °C, in contrast to the closely related species T. chlamydosporus and T. subaurantiacus. Talaromyces neorugulosus is morphologically similar to T. rugulosus. These species can be distinguished on their conidial colour on CYA and DG18; however, BenA, CaM or RPB2 sequencing is recommended for accurate identification. Talaromyces section Talaromyces was initially introduced for species producing yellow, white, creamish, pinkish or reddish ascomata and yellow ascospores (Stolk & Samson 1972), and this section currently contains both asexual and sexual species (Samson et al., 2011, Yilmaz et al., 2012, Manoch et al., 2013, Sang et al., 2013, Yilmaz et al., 2014, Visagie et al., 2014, Wang et al., 2016). Morphologically, the two new Talaromyces species proposed in this section (T. beijingensis and T. fusiformis) can be distinguished from related species by mycelial colour, conidial shape and ornamentation (see notes in Taxonomy section). Talaromyces aerius resembles other species of section Trachyspermi by restricted growth on CYA, YES and DG18, a slightly faster growth rate on MEA, and poor growth on CREA. Talaromyces aerius differs from the phylogenetically related species T. solicola by its conidial ornamentation (smooth-walled in T. aerius vs. rough-walled in T. solicola). The two recently described Trachyspermi members, T. systylus and T. rubrifaciens, were included in the phylogenetic analyses. Talaromyces systylus is well-separated from its sister species T. trachyspermus and T. assiutensis, while all of T. rubrifaciens strains cluster together with T. albobiverticillius. The BenA gene, which is recommended as the identification marker in Talaromyces (Yilmaz ), is identical for these two species. Talaromyces albobiverticillius has a large intraspecies sequence variation (Frisvad ). For the description of T. rubrifaciens, Luo included a limited number of T. albobiverticillius sequences in their phylogenetic analyses. This selection did not fully represent the sequence diversity within this species. The noticeable features like the formation of restricted colonies on MEA and CYA, soluble red pigment production on YES and MEA and green coloured conidia are common in T. albobiverticillius (Frisvad et al., 2013, Yilmaz et al., 2014). Other reported characters to distinguish T. rubrifaciens from T. albobiverticillius are the number of metulae (9–15) and phialides (6–10). These characters were, however, not depicted in the original figures (Luo ). Based on molecular and morphological characters, we consider T. rubrifaciens a synonym of T. albobiverticillius. Interestingly, four of our indoor isolates were also identified as T. albobiverticillius. Visagie reported this species in house dust from Thailand and South Africa, and all of these results indicate a widespread occurrence of this species in indoor environments. The research on airborne fungi started in China in 1957, when Wu compared the outdoor fungal concentration from 1957 to 1982 in Beijing, China. The predominant genera found were Cladosporium, Aspergillus, Alternaria and Penicillium. Later, several investigations were conducted on airborne fungi in different cities and seasons. In most studies only the fungal propagules were quantified and if identification was performed, then it was based on morphology (Wu et al., 2000, Li et al., 2006, Si et al., 2007, Liu et al., 2014). Fang analysed the culturable airborne fungi in outdoor environments in Beijing, China. Talaromyces funiculosus (= Penicillium funiculosum), T. pinophilus (= P. pinophilum), T. ruber (= P. rubrum), T. wortmannii (= P. variabile), and T. flavus were identified using the Biolog Microstation System (Biolog, Hayward, CA). Li analysed the indoor and outdoor Penicillium population in Nanchang city, Jiangxi province, and using morphological identification, T. islandicus (= P. islandicum) was found to be one of the predominant species. During a study on indoor fungi in Beijing, Fang identified their isolates on genus level using ITS sequences, and three of them belong to Talaromyces. In Flora Fungorum Sinicorum v35 Penicillium et teleomorphi cognati, Kong (2007) described the most complete records of Penicillium and its teleomorphs in China. Talaromyces funiculosus (= Penicillium funiculosum), T. verruculosus (= Penicillium verruculosum) and T. flavus were recorded from air. Talaromyces contains several important etiologic agents. Talaromyces marneffei, the only known dimorphic species in Talaromyces, has been considered to be exclusively associated with acquired immunodeficiency syndrome (AIDS) caused by human immunodeficiency virus (HIV) infections (Supparatpinyo ). Nowadays the epidemiology of T. marneffei infection has changed significantly with the improved treatment of HIV, and an increasing number and proportion of cases have been reported in non-HIV-infected patients, who had other immunocompromising conditions (Tang et al., 2010, Lee et al., 2012, Lee et al., 2014, Chan et al., 2016). In our survey of indoor fungi in China we did not detect T. marneffei. Other medically important Talaromyces species including T. indigoticus, T. piceus, T. indigoticus, T. helicus, T. rugulosus, T. purpurogenus, T. radicus and T. verruculosus have been reported in superficial or disseminated, fatal infections (Neuhann, 1976, Swietliczkowa et al., 1984, de Hoog et al., 2000, Horré et al., 2001, Santos et al., 2006, de Vos et al., 2009, Weisenborn et al., 2010, Tomlinson et al., 2011). Among the nine new species described here, T. adpressus, T. beijingensis, T. diversiformis, T. fusiformis and T. reverso-olivaceus grow well at 37 °C, thus are more risky for human health. In our study, 13 species were identified including T. islandicus, T. aurantiacus, T. siamensis, T. albobiverticillius and nine new species. The main focus of our study was to describe the indoor Talaromyces diversity in houses in Beijing, China, and further research is needed to study the ecology of these species. The “old” Penicillium and Talaromyces concepts and morphological identification are still used in China nowadays, and it is expected that with the broad application of molecular diagnostics, the number of indoor Talaromyces species in China will increase.
  30 in total

1.  Characteristics of indoor and outdoor airborne fungi at suburban and urban homes in two seasons.

Authors:  W Pei-Chih; S Huey-Jen; L Chia-Yin
Journal:  Sci Total Environ       Date:  2000-05-15       Impact factor: 7.963

2.  MrBayes 3: Bayesian phylogenetic inference under mixed models.

Authors:  Fredrik Ronquist; John P Huelsenbeck
Journal:  Bioinformatics       Date:  2003-08-12       Impact factor: 6.937

3.  Talaromyces indigoticus Takada & Udagawa, the first record for Panama and the American continent.

Authors:  Jascha L F Weisenborn; Roland Kirschner; Orlando Cáceres; Meike Piepenbring
Journal:  Mycopathologia       Date:  2010-03-28       Impact factor: 2.574

4.  Disseminated penicilliosis, recurrent bacteremic nontyphoidal salmonellosis, and burkholderiosis associated with acquired immunodeficiency due to autoantibody against gamma interferon.

Authors:  Bone Siu-Fai Tang; Jasper Fuk-Woo Chan; Min Chen; Owen Tak-Yin Tsang; M Y Mok; Raymond Wai-Man Lai; Rodney Lee; Tak-Lun Que; Herman Tse; Iris Wai-Sum Li; Kelvin Kai-Wang To; Vincent Chi-Chung Cheng; Eric Yuk-Tat Chan; Bojian Zheng; Kwok-Yung Yuen
Journal:  Clin Vaccine Immunol       Date:  2010-05-05

5.  Case report. Fungaemia due to Penicillium piceum, a member of the Penicillium marneffei complex.

Authors:  R Horré; S Gilges; P Breig; B Kupfer; G S de Hoog; E Hoekstra; N Poonwan; K P Schaal
Journal:  Mycoses       Date:  2001-12       Impact factor: 4.377

6.  Granulomatous lymphadenitis caused by Talaromyces helicus in a Labrador Retriever.

Authors:  Julie Kristy Tomlinson; Avery James Cooley; Shuping Zhang; Melanie Elaine Johnson
Journal:  Vet Clin Pathol       Date:  2011-12       Impact factor: 1.180

7.  MAFFT multiple sequence alignment software version 7: improvements in performance and usability.

Authors:  Kazutaka Katoh; Daron M Standley
Journal:  Mol Biol Evol       Date:  2013-01-16       Impact factor: 16.240

8.  [The treatment of keratomycosis with clotrimazole (author's transl)].

Authors:  T Neuhann
Journal:  Klin Monbl Augenheilkd       Date:  1976-10       Impact factor: 0.700

9.  Phylogeny and nomenclature of the genus Talaromyces and taxa accommodated in Penicillium subgenus Biverticillium.

Authors:  R A Samson; N Yilmaz; J Houbraken; H Spierenburg; K A Seifert; S W Peterson; J Varga; J C Frisvad
Journal:  Stud Mycol       Date:  2011-11-15       Impact factor: 16.097

10.  Delimitation and characterisation of Talaromyces purpurogenus and related species.

Authors:  N Yilmaz; J Houbraken; E S Hoekstra; J C Frisvad; C M Visagie; R A Samson
Journal:  Persoonia       Date:  2012-11-12       Impact factor: 11.051

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  15 in total

1.  Classification of Aspergillus, Penicillium, Talaromyces and related genera (Eurotiales): An overview of families, genera, subgenera, sections, series and species.

Authors:  J Houbraken; S Kocsubé; C M Visagie; N Yilmaz; X-C Wang; M Meijer; B Kraak; V Hubka; K Bensch; R A Samson; J C Frisvad
Journal:  Stud Mycol       Date:  2020-06-27       Impact factor: 16.097

2.  Evaluation of phenotypes and genotypes of airborne Fungi during middle eastern dust storms.

Authors:  Mohammad Yarahmadi; Seyed Jamal Hashemi; Asghar Sepahvand; Abbas Shahsavani; Roshanak Dai Ghazvini; Sassan Rezaie; Saham Ansari; Mostafa Hadei; Mohsen Gerami Shoar; Heidar Bakhshi; Bahram Kamarei; Kazem Ahmadikia
Journal:  J Environ Health Sci Eng       Date:  2020-03-07

3.  Draft Genome Sequence of Talaromyces adpressus.

Authors:  Gabriella Cerullo; Jos Houbraken; Zoraide Granchi; Olimpia Pepe; Simona Varriale; Valeria Ventorino; Thomas Chin-A-Woeng; Martin Meijer; Ronald P de Vries; Vincenza Faraco
Journal:  Genome Announc       Date:  2018-01-11

4.  Phylogenetic analysis of Monascus and new species from honey, pollen and nests of stingless bees.

Authors:  R N Barbosa; S L Leong; O Vinnere-Pettersson; A J Chen; C M Souza-Motta; J C Frisvad; R A Samson; N T Oliveira; J Houbraken
Journal:  Stud Mycol       Date:  2017-04-12       Impact factor: 16.097

5.  Three new species of Talaromyces sect. Talaromyces discovered from soil in China.

Authors:  Xian-Zhi Jiang; Zhong-Dong Yu; Yong-Ming Ruan; Long Wang
Journal:  Sci Rep       Date:  2018-03-21       Impact factor: 4.379

6.  New Penicillium and Talaromyces species from honey, pollen and nests of stingless bees.

Authors:  Renan N Barbosa; Jadson D P Bezerra; Cristina M Souza-Motta; Jens C Frisvad; Robert A Samson; Neiva T Oliveira; Jos Houbraken
Journal:  Antonie Van Leeuwenhoek       Date:  2018-04-13       Impact factor: 2.271

7.  Morphology and multigene phylogeny of Talaromycesamyrossmaniae, a new synnematous species belonging to the section Trachyspermi from India.

Authors:  Kunhiraman C Rajeshkumar; Neriman Yilmaz; Sayali D Marathe
Journal:  MycoKeys       Date:  2019-01-28       Impact factor: 2.984

8.  Chromosome-Level Comprehensive Genome of Mangrove Sediment-Derived Fungus Penicillium variabile HXQ-H-1.

Authors:  Ling Peng; Liangwei Li; Xiaochuan Liu; Jianwei Chen; Chengcheng Shi; Wenjie Guo; Qiwu Xu; Guangyi Fan; Xin Liu; Dehai Li
Journal:  J Fungi (Basel)       Date:  2019-12-23

9.  New section and species in Talaromyces.

Authors:  Bing-Da Sun; Amanda J Chen; Jos Houbraken; Jens C Frisvad; Wen-Ping Wu; Hai-Lei Wei; Yu-Guang Zhou; Xian-Zhi Jiang; Robert A Samson
Journal:  MycoKeys       Date:  2020-07-07       Impact factor: 2.984

Review 10.  Taxonomy and evolution of Aspergillus, Penicillium and Talaromyces in the omics era - Past, present and future.

Authors:  Chi-Ching Tsang; James Y M Tang; Susanna K P Lau; Patrick C Y Woo
Journal:  Comput Struct Biotechnol J       Date:  2018-05-31       Impact factor: 7.271

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