Literature DB >> 28069412

Influence of glutamic acid residues and pH on the properties of transmembrane helices.

Venkatesan Rajagopalan1, Denise V Greathouse1, Roger E Koeppe2.   

Abstract

Negatively charged side chains are important for the function of particular ion channels and certain other membrane proteins. To investigate the influence of single glutamic acid side chains on helices that span lipid-bilayer membranes, we have employed GWALP23 (acetyl-GGALW5LALALALALALALW19LAGA-amide) as a favorable host peptide framework. We substituted individual Leu residues with Glu residues (L12E or L14E or L16E) and incorporated specific 2H-labeled alanine residues within the core helical region or near the ends of the sequence. Solid-state 2H NMR spectra reveal little change for the core labels in GWALP23-E12, -E14 and -E16 over a pH range of 4 to 12.5, with the spectra being broader for samples in DOPC compared to DLPC bilayers. The spectra for samples with deuterium labels near the helix ends on alanines 3 and 21 show modest pH-dependent changes in the extent of unwinding of the helix terminals in DLPC and DOPC bilayers. The combined results indicate minor overall responses of these transmembrane helices to changes in pH, with the most buried residue E12 showing no pH dependence. While the Glu residues E14 and E16 may have high pKa values in the lipid bilayer environment, it is also possible that a paucity of helix response is masking the pKa values. Interestingly, when E16 is present, spectral changes at high pH report significant local unwinding of the core helix. Our results are consistent with the expectation that buried carboxyl groups aggressively hold their protons and/or waters of hydration.
Copyright © 2017 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Deuterium solid-state NMR; GWALP23 transmembrane helix; Glutamic acid titration; Helix terminal unwinding; Membrane proteins

Mesh:

Substances:

Year:  2017        PMID: 28069412      PMCID: PMC5274556          DOI: 10.1016/j.bbamem.2017.01.006

Source DB:  PubMed          Journal:  Biochim Biophys Acta Biomembr        ISSN: 0005-2736            Impact factor:   3.747


  37 in total

1.  Helical peptides with three pairs of Asp-Arg and Glu-Arg residues in different orientations and spacings.

Authors:  B M Huyghues-Despointes; J M Scholtz; R L Baldwin
Journal:  Protein Sci       Date:  1993-01       Impact factor: 6.725

2.  DFT/electrostatic calculations of pK(a) values in cytochrome c oxidase.

Authors:  Dragan M Popović; Jason Quenneville; Alexei A Stuchebrukhov
Journal:  J Phys Chem B       Date:  2005-03-03       Impact factor: 2.991

3.  Large shifts in pKa values of lysine residues buried inside a protein.

Authors:  Daniel G Isom; Carlos A Castañeda; Brian R Cannon; Bertrand García-Moreno
Journal:  Proc Natl Acad Sci U S A       Date:  2011-03-09       Impact factor: 11.205

4.  Involvement of Glu-264 and Arg-235 in the essential interaction between the catalytic imidazole and substrate for the D-lactate dehydrogenase catalysis.

Authors:  H Taguchi; T Ohta; H Matsuzawa
Journal:  J Biochem       Date:  1997-10       Impact factor: 3.387

5.  Charges in the hydrophobic interior of proteins.

Authors:  Daniel G Isom; Carlos A Castañeda; Brian R Cannon; Priya D Velu; Bertrand García-Moreno E
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-26       Impact factor: 11.205

6.  Charged or aromatic anchor residue dependence of transmembrane peptide tilt.

Authors:  Vitaly V Vostrikov; Anna E Daily; Denise V Greathouse; Roger E Koeppe
Journal:  J Biol Chem       Date:  2010-07-28       Impact factor: 5.157

7.  Accommodation of a central arginine in a transmembrane peptide by changing the placement of anchor residues.

Authors:  Vitaly V Vostrikov; Benjamin A Hall; Mark S P Sansom; Roger E Koeppe
Journal:  J Phys Chem B       Date:  2012-10-17       Impact factor: 2.991

8.  Comparison of "Polarization inversion with spin exchange at magic angle" and "geometric analysis of labeled alanines" methods for transmembrane helix alignment.

Authors:  Vitaly V Vostrikov; Christopher V Grant; Anna E Daily; Stanley J Opella; Roger E Koeppe
Journal:  J Am Chem Soc       Date:  2008-09-03       Impact factor: 15.419

9.  Position and ionization state of Asp in the core of membrane-inserted alpha helices control both the equilibrium between transmembrane and nontransmembrane helix topography and transmembrane helix positioning.

Authors:  Gregory A Caputo; Erwin London
Journal:  Biochemistry       Date:  2004-07-13       Impact factor: 3.162

10.  A buried lysine that titrates with a normal pKa: role of conformational flexibility at the protein-water interface as a determinant of pKa values.

Authors:  Michael J Harms; Jamie L Schlessman; Michael S Chimenti; Gloria R Sue; Ana Damjanović; Bertrand García-Moreno
Journal:  Protein Sci       Date:  2008-03-27       Impact factor: 6.725

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  1 in total

1.  Lipid-Dependent Titration of Glutamic Acid at a Bilayer Membrane Interface.

Authors:  Matthew J McKay; Kelsey A Marr; Jake R Price; Denise V Greathouse; Roger E Koeppe
Journal:  ACS Omega       Date:  2021-03-17
  1 in total

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