Literature DB >> 28067410

The Photolyase/Cryptochrome Family of Proteins as DNA Repair Enzymes and Transcriptional Repressors.

Ibrahim Halil Kavakli1,2,3, Ibrahim Baris2, Mehmet Tardu3, Şeref Gül1, Haşimcan Öner1, Sibel Çal2, Selma Bulut1, Darya Yarparvar1, Çağlar Berkel2, Pınar Ustaoğlu2, Cihan Aydın4.   

Abstract

Light is a very important environmental factor that governs many cellular responses in organisms. As a consequence, organisms possess different kinds of light-sensing photoreceptors to regulate their physiological variables and adapt to a given habitat. The cryptochrome/photolyase family (CPF) includes photoreceptors that perform different functions in different organisms. Photolyases repair ultraviolet-induced DNA damage by a process known as photoreactivation using photons absorbed from the blue end of the light spectrum. On the other hand, cryptochromes act as blue light circadian photoreceptors in plants and Drosophila to regulate growth and development. In mammals, cryptochromes have light-independent functions and are very important transcriptional regulators that act at the molecular level as negative transcriptional regulators of the circadian clock. In this review, we highlight current knowledge concerning the structural and functional relationships of CPF members.
© 2016 The American Society of Photobiology.

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Year:  2017        PMID: 28067410     DOI: 10.1111/php.12669

Source DB:  PubMed          Journal:  Photochem Photobiol        ISSN: 0031-8655            Impact factor:   3.421


  16 in total

Review 1.  Periodicity, repression, and the molecular architecture of the mammalian circadian clock.

Authors:  Clark Rosensweig; Carla B Green
Journal:  Eur J Neurosci       Date:  2018-12-08       Impact factor: 3.386

Review 2.  A light life together: photosensing in the plant microbiota.

Authors:  Aba Losi; Wolfgang Gärtner
Journal:  Photochem Photobiol Sci       Date:  2021-03-01       Impact factor: 3.982

3.  A CLOCK-binding small molecule disrupts the interaction between CLOCK and BMAL1 and enhances circadian rhythm amplitude.

Authors:  Yagmur Umay Doruk; Darya Yarparvar; Yasemin Kubra Akyel; Seref Gul; Ali Cihan Taskin; Fatma Yilmaz; Ibrahim Baris; Nuri Ozturk; Metin Türkay; Narin Ozturk; Alper Okyar; Ibrahim Halil Kavakli
Journal:  J Biol Chem       Date:  2020-02-04       Impact factor: 5.157

4.  Light Regulates Acinetobacter baumannii Chromosomal and pAB3 Plasmid Genes at 37°C.

Authors:  Mariah S Squire; Hope A Townsend; Aminul Islam; Luis A Actis
Journal:  J Bacteriol       Date:  2022-05-23       Impact factor: 3.476

5.  The Structure-Based Molecular-Docking Screen Against Core Clock Proteins to Identify Small Molecules to Modulate the Circadian Clock.

Authors:  Seref Gul; Ibrahim Halil Kavakli
Journal:  Methods Mol Biol       Date:  2022

6.  The Arg-293 of Cryptochrome1 is responsible for the allosteric regulation of CLOCK-CRY1 binding in circadian rhythm.

Authors:  Seref Gul; Cihan Aydin; Onur Ozcan; Berke Gurkan; Saliha Surme; Ibrahim Baris; Ibrahim Halil Kavakli
Journal:  J Biol Chem       Date:  2020-10-07       Impact factor: 5.157

7.  Transcriptome analysis of the circadian clock gene BMAL1 deletion with opposite carcinogenic effects.

Authors:  Handan Emisoglu-Kulahli; Seref Gul; Hande Morgil; Onur Ozcan; Fatih Aygenli; Saba Selvi; Ibrahim Halil Kavakli; Nuri Ozturk
Journal:  Funct Integr Genomics       Date:  2020-10-27       Impact factor: 3.410

8.  CRY1-CBS binding regulates circadian clock function and metabolism.

Authors:  Sibel Cal-Kayitmazbatir; Eylem Kulkoyluoglu-Cotul; Jacqueline Growe; Christopher P Selby; Seth D Rhoades; Dania Malik; Hasimcan Oner; Hande Asimgil; Lauren J Francey; Aziz Sancar; Warren D Kruger; John B Hogenesch; Aalim Weljie; Ron C Anafi; Ibrahim Halil Kavakli
Journal:  FEBS J       Date:  2020-06-09       Impact factor: 5.542

9.  Effectiveness of solar water disinfection in the era of COVID-19 (SARS-CoV-2) pandemic for contaminated water/wastewater treatment considering UV effect and temperature.

Authors:  Seyed Masoud Parsa; Saba Momeni; Ahmadreza Hemmat; Masoud Afrand
Journal:  J Water Process Eng       Date:  2021-07-17

Review 10.  Molecular Aspects of Circadian Pharmacology and Relevance for Cancer Chronotherapy.

Authors:  Narin Ozturk; Dilek Ozturk; Ibrahim Halil Kavakli; Alper Okyar
Journal:  Int J Mol Sci       Date:  2017-10-17       Impact factor: 5.923

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