Literature DB >> 28066974

Hydrogen Mobility and Protein-Water Interactions in Proteins in the Solid State.

Kálmán Tompa1, Mónika Bokor1, Dorina Ágner1, Dávid Iván1,2, Dénes Kovács3, Tamás Verebélyi1, Péter Tompa3,4.   

Abstract

In this work the groundwork is laid for characterizing the mobility of hydrogen-hydrogen pairs (proton-proton radial vectors) in proteins in the solid state that contain only residual water. In this novel approach, we introduce new ways of analyzing and interpreting data: 1) by representing hydrogen mobility (HM) and melting diagram (MD) data recorded by wide-line 1 H NMR spectroscopic analysis as a function of fundamental temperature (thermal excitation energy); 2) by suggesting a novel mode of interpretation of these parameters that sheds light on details of protein-water interactions, such as the exact amount of water molecules and the distribution of barrier potentials pertaining to their rotational and surface translational mobility; 3) by relying on directly determined physical observables. We illustrate the power of this approach by studying the behavior of two proteins, the structured enzyme lysozyme and the intrinsically disordered ERD14.
© 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  NMR spectroscopy; hydrogen bonds; protein hydration; proteins; solid-state structures

Mesh:

Substances:

Year:  2017        PMID: 28066974     DOI: 10.1002/cphc.201601136

Source DB:  PubMed          Journal:  Chemphyschem        ISSN: 1439-4235            Impact factor:   3.102


  5 in total

1.  Wide-Line NMR Melting Diagrams, Their Thermodynamic Interpretation, and Secondary Structure Predictions for A30P and E46K α-Synuclein.

Authors:  Mónika Bokor; Eszter Házy; Ágnes Tantos
Journal:  ACS Omega       Date:  2022-05-23

2.  WT and A53T α-Synuclein Systems: Melting Diagram and Its New Interpretation.

Authors:  Mónika Bokor; Ágnes Tantos; Péter Tompa; Kyou-Hoon Han; Kálmán Tompa
Journal:  Int J Mol Sci       Date:  2020-06-03       Impact factor: 5.923

3.  The Melting Diagram of Protein Solutions and Its Thermodynamic Interpretation.

Authors:  Kálmán Tompa; Mónika Bokor; Péter Tompa
Journal:  Int J Mol Sci       Date:  2018-11-12       Impact factor: 5.923

4.  Hydration shell differentiates folded and disordered states of a Trp-cage miniprotein, allowing characterization of structural heterogeneity by wide-line NMR measurements.

Authors:  Nóra Taricska; Mónika Bokor; Dóra K Menyhárd; Kálmán Tompa; András Perczel
Journal:  Sci Rep       Date:  2019-02-27       Impact factor: 4.379

5.  Secondary Structures of Proteins: A Comparison of Models and Experimental Results.

Authors:  Mónika Bokor; Ágnes Tantos
Journal:  J Proteome Res       Date:  2021-02-23       Impact factor: 4.466

  5 in total

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