Literature DB >> 28063303

Peptides and peptidomimetics as regulators of protein-protein interactions.

Anna D Cunningham1, Nir Qvit2, Daria Mochly-Rosen3.   

Abstract

Protein-protein interactions are essential for almost all intracellular and extracellular biological processes. Regulation of protein-protein interactions is one strategy to regulate cell fate in a highly selective manner. Specifically, peptides are ideal candidates for inhibition of protein-protein interactions because they can mimic a protein surface to effectively compete for binding. Additionally, peptides are synthetically accessible and can be stabilized by chemical modifications. In this review, we survey screening and rational design methods for identifying peptides to inhibit protein-protein interactions, as well as methods for stabilizing peptides to effectively mimic protein surfaces. In addition, we discuss recent applications of peptides to regulate protein-protein interactions for both basic research and therapeutic purposes.
Copyright © 2016 Elsevier Ltd. All rights reserved.

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Year:  2017        PMID: 28063303      PMCID: PMC5496809          DOI: 10.1016/j.sbi.2016.12.009

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  51 in total

1.  Intracellular receptors for activated protein kinase C. Identification of a binding site for the enzyme.

Authors:  D Mochly-Rosen; H Khaner; J Lopez; B L Smith
Journal:  J Biol Chem       Date:  1991-08-15       Impact factor: 5.157

Review 2.  Rationally designed peptide regulators of protein kinase C.

Authors:  Eric N Churchill; Nir Qvit; Daria Mochly-Rosen
Journal:  Trends Endocrinol Metab       Date:  2008-12-04       Impact factor: 12.015

Review 3.  The exploration of macrocycles for drug discovery--an underexploited structural class.

Authors:  Edward M Driggers; Stephen P Hale; Jinbo Lee; Nicholas K Terrett
Journal:  Nat Rev Drug Discov       Date:  2008-07       Impact factor: 84.694

Review 4.  Peptide modulators of protein-protein interactions in intracellular signaling.

Authors:  M C Souroujon; D Mochly-Rosen
Journal:  Nat Biotechnol       Date:  1998-10       Impact factor: 54.908

5.  A novel Drp1 inhibitor diminishes aberrant mitochondrial fission and neurotoxicity.

Authors:  Xin Qi; Nir Qvit; Yu-Chin Su; Daria Mochly-Rosen
Journal:  J Cell Sci       Date:  2012-12-13       Impact factor: 5.285

Review 6.  Small-molecule inhibitors of protein-protein interactions: progressing toward the reality.

Authors:  Michelle R Arkin; Yinyan Tang; James A Wells
Journal:  Chem Biol       Date:  2014-09-18

Review 7.  Designing helical peptide inhibitors of protein-protein interactions.

Authors:  Raheleh Rezaei Araghi; Amy E Keating
Journal:  Curr Opin Struct Biol       Date:  2016-04-25       Impact factor: 6.809

8.  Fundamental molecular mechanism for the cellular uptake of guanidinium-rich molecules.

Authors:  Henry D Herce; Angel E Garcia; M Cristina Cardoso
Journal:  J Am Chem Soc       Date:  2014-12-01       Impact factor: 15.419

Review 9.  Alternative modulation of protein-protein interactions by small molecules.

Authors:  Gerhard Fischer; Maxim Rossmann; Marko Hyvönen
Journal:  Curr Opin Biotechnol       Date:  2015-05-15       Impact factor: 9.740

Review 10.  Lambda-display: a powerful tool for antigen discovery.

Authors:  Elisa Beghetto; Nicola Gargano
Journal:  Molecules       Date:  2011-04-13       Impact factor: 4.411

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  31 in total

1.  Methods for Molecular Modelling of Protein Complexes.

Authors:  Tejashree Rajaram Kanitkar; Neeladri Sen; Sanjana Nair; Neelesh Soni; Kaustubh Amritkar; Yogendra Ramtirtha; M S Madhusudhan
Journal:  Methods Mol Biol       Date:  2021

Review 2.  Molecular evolution of peptides by yeast surface display technology.

Authors:  Sara Linciano; Stefano Pluda; Arianna Bacchin; Alessandro Angelini
Journal:  Medchemcomm       Date:  2019-07-10       Impact factor: 3.597

3.  Targeting cancer addiction for SALL4 by shifting its transcriptome with a pharmacologic peptide.

Authors:  Bee Hui Liu; Chacko Jobichen; C S Brian Chia; Tim Hon Man Chan; Jing Ping Tang; Theodora X Y Chung; Jia Li; Anders Poulsen; Alvin W Hung; Xiaoying Koh-Stenta; Yaw Sing Tan; Chandra S Verma; Hong Kee Tan; Chan-Shuo Wu; Feng Li; Jeffrey Hill; Joma Joy; Henry Yang; Li Chai; J Sivaraman; Daniel G Tenen
Journal:  Proc Natl Acad Sci U S A       Date:  2018-07-05       Impact factor: 11.205

4.  Next Generation Techniques for Determination of Protein-Protein Interactions: Beyond the Crystal Structure.

Authors:  Rachel Carter; Alessandra Luchini; Lance Liotta; Amanda Haymond
Journal:  Curr Pathobiol Rep       Date:  2019-07-01

5.  Des3PI: a fragment-based approach to design cyclic peptides targeting protein-protein interactions.

Authors:  Maxence Delaunay; Tâp Ha-Duong
Journal:  J Comput Aided Mol Des       Date:  2022-08-06       Impact factor: 4.179

6.  Rosetta Machine Learning Models Accurately Classify Positional Effects of Thioamides on Proteolysis.

Authors:  Sam Giannakoulias; Sumant R Shringari; Chunxiao Liu; Hoang Anh T Phan; Taylor M Barrett; John J Ferrie; E James Petersson
Journal:  J Phys Chem B       Date:  2020-09-01       Impact factor: 2.991

Review 7.  Conversion of Protein Active Regions into Peptidomimetic Therapeutic Leads Using Backbone Cyclization and Cycloscan - How to Do it Yourself!

Authors:  Samuel J S Rubin; Yftah Tal-Gan; Chaim Gilon; Nir Qvit
Journal:  Curr Top Med Chem       Date:  2018       Impact factor: 3.295

8.  Macropinocytosis as a Key Determinant of Peptidomimetic Uptake in Cancer Cells.

Authors:  Daniel Y Yoo; Stephanie A Barros; Gordon C Brown; Christian Rabot; Dafna Bar-Sagi; Paramjit S Arora
Journal:  J Am Chem Soc       Date:  2020-08-13       Impact factor: 15.419

9.  Small-Molecule Activators of Glucose-6-phosphate Dehydrogenase (G6PD) Bridging the Dimer Interface.

Authors:  Andrew G Raub; Sunhee Hwang; Naoki Horikoshi; Anna D Cunningham; Simin Rahighi; Soichi Wakatsuki; Daria Mochly-Rosen
Journal:  ChemMedChem       Date:  2019-06-27       Impact factor: 3.466

10.  Solid-phase fluorescent BODIPY-peptide synthesis via in situ dipyrrin construction.

Authors:  Yue Wu; Wing-Sze Tam; Ho-Fai Chau; Simranjeet Kaur; Waygen Thor; Wei Shen Aik; Wai-Lun Chan; Markus Zweckstetter; Ka-Leung Wong
Journal:  Chem Sci       Date:  2020-09-24       Impact factor: 9.825

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