Literature DB >> 28058828

Quinary Interactions Weaken the Electric Field Generated by Protein Side-Chain Charges in the Cell-like Environment.

Ning Zhang1, Liaoyuan An, Jingwen Li1, Zhijun Liu2, Lishan Yao.   

Abstract

The intramolecular electric field (e-field) generated by protein GB3 side-chain charges K/E10, K/E19, and D/K40 was measured in the absence or presence of macromolecular crowding. The e-field responds differently to different crowding agents-dextran, Ficoll, BSA, and E. coli cell lysate. Dextran and Ficoll have no effect on the e-field. The lysate generally weakens the e-field but the amplitude of weakening varies greatly. For example, the e-field by K19 is reduced by 67% in the presence of 90 g/L lysate, corresponding to a charge change from 0.9 to 0.3 e for K19, whereas the e-fields by D/K40 are weakened only by ∼7% under the same lysate concentration. The extent of the e-field weakening by BSA is in between that by Ficoll (dextran) and lysate. Further investigations suggest that the e-field weakening mechanism by lysate is similar to that by NaCl. That is, the e-field generated by a protein surface charge affects the distribution of lysate which creates a reaction field and weakens the protein e-field. Our study indicates that the protein electrostatic property can be changed significantly due to quinary interaction with the cell environment.

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Year:  2017        PMID: 28058828     DOI: 10.1021/jacs.6b11058

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  3 in total

1.  Surface Charge Modulates Protein-Protein Interactions in Physiologically Relevant Environments.

Authors:  Alex J Guseman; Shannon L Speer; Gerardo M Perez Goncalves; Gary J Pielak
Journal:  Biochemistry       Date:  2018-03-06       Impact factor: 3.162

2.  Crowding in Cellular Environments at an Atomistic Level from Computer Simulations.

Authors:  Michael Feig; Isseki Yu; Po-Hung Wang; Grzegorz Nawrocki; Yuji Sugita
Journal:  J Phys Chem B       Date:  2017-07-12       Impact factor: 2.991

3.  Polyol and sugar osmolytes can shorten protein hydrogen bonds to modulate function.

Authors:  Jingwen Li; Jingfei Chen; Liaoyuan An; Xiaoxiang Yuan; Lishan Yao
Journal:  Commun Biol       Date:  2020-09-23
  3 in total

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