| Literature DB >> 28056835 |
Glen P Martin1, Mamas A Mamas2,3, Niels Peek2,4, Iain Buchan2,4, Matthew Sperrin2.
Abstract
BACKGROUND: Clinical prediction models (CPMs) are increasingly deployed to support healthcare decisions but they are derived inconsistently, in part due to limited data. An emerging alternative is to aggregate existing CPMs developed for similar settings and outcomes. This simulation study aimed to investigate the impact of between-population-heterogeneity and sample size on aggregating existing CPMs in a defined population, compared with developing a model de novo.Entities:
Keywords: Clinical prediction models; Computer simulation; Contextual heterogeneity; Model aggregation; Validation
Mesh:
Year: 2017 PMID: 28056835 PMCID: PMC5217317 DOI: 10.1186/s12874-016-0277-1
Source DB: PubMed Journal: BMC Med Res Methodol ISSN: 1471-2288 Impact factor: 4.615
Fig. 1Simulation Procedure: A pictorial representation of the simulation procedure for a given value of population heterogeneity, σ, and a given development sample size, n . This process was then repeated across all combinations of σ and n
Summary measures of the difference in generating coefficients values across all simulated populations
|
| LES, ESII, STS, German AV | LES, ESII | |||||||
|---|---|---|---|---|---|---|---|---|---|
| 0 | 0.125 | 0.25 | 0.375 | 0.5 | 0.75 | 1 | |||
| Lower Quartilea | 0 | 0.29 | 0.58 | 0.86 | 1.16 | 1.74 | 2.31 | 0.37 | 0.14 |
| Mediana | 0 | 0.31 | 0.63 | 0.95 | 1.27 | 1.90 | 2.52 | 0.57 | 0.31 |
| Meana | 0 | 0.32 | 0.63 | 0.95 | 1.27 | 1.90 | 2.53 | 0.70 | 0.37 |
| Upper Quartilea | 0 | 0.34 | 0.68 | 1.03 | 1.38 | 2.06 | 2.74 | 0.85 | 0.54 |
| SDb | 0 | 0.12 | 0.24 | 0.36 | 0.48 | 0.71 | 0.95 | 0.33 | 0.26 |
The values for the LES, ESII, STS and German AV are approximate, since variable definitions vary between CPMs
a: values represent summary measures across all iterations of the average difference between the largest coefficient and smallest coefficient across populations b: the average standard deviation (SD) of each coefficient across all populations. All values aim to guide the between-population heterogeneity induced through different σ values
Fig. 2Calibration Intercept: Calibration intercept in the validation set for SR, PCA and the two newly derived models across all simulation situations. The PLS results were nearly identical to SR/PCA and so are omitted for clarity. Note: σ = 1 was removed from the plot for clarity since the results quantitatively similar to σ = 0.75
Fig. 3Calibration Slope: Calibration slope in the validation set for SR, PCA and the two newly derived models across all simulation situations. The PLS results were nearly identical to SR/PCA and so are omitted for clarity. Note: σ = 1 was removed from the plot for clarity since the results quantitatively similar to σ = 0.75
Fig. 4Discrimination: Area under receiver operating characteristic curve (AUC) in the validation set for SR, PCA and the two newly derived models across all scenarios. The PLS results were nearly identical to SR/PCA and so are omitted for clarity. Note: σ = 1 was removed from the plot for clarity since the results quantitatively similar to σ = 0.75
Modelling strategy recommendations when the mean incidence of adverse outcome was 20%
| σ |
| |||||
|---|---|---|---|---|---|---|
| 150 | 250 | 500 | 1000 | 5000 | 10000 | |
| 0 | SR | SR | Either | Either | Either | Either |
| 0.125 | SR | SR | Either | Either | Either | Either |
| 0.25 | SR | SR | Either | Either | Either | Either |
| 0.375 | SR | SR | Either | Either | Ridge | Ridge |
| 0.5 | SR | SR | Either | Ridge | Ridge | Ridge |
| 0.75 | SR | SR | Ridge | Ridge | Ridge | Ridge |
| 1.00 | SR | SR | Ridge | Ridge | Ridge | Ridge |
Modelling strategy recommendations when the mean incidence of adverse outcome was 50%
| σ |
| |||||
|---|---|---|---|---|---|---|
| 150 | 250 | 500 | 1000 | 5000 | 10000 | |
| 0 | SR | SR | Either | Either | Either | Either |
| 0.125 | SR | SR | Either | Either | Either | Either |
| 0.25 | SR | SR | Either | Either | Either | Either |
| 0.375 | SR | SR | Either | Ridge | Ridge | Ridge |
| 0.5 | SR | Ridge | Ridge | Ridge | Ridge | Ridge |
| 0.75 | Ridge | Ridge | Ridge | Ridge | Ridge | Ridge |
| 1.00 | Ridge | Ridge | Ridge | Ridge | Ridge | Ridge |