| Literature DB >> 28050846 |
Yong Zhou1, Yu-Bo Sun1, Hong-Wei He1, Jun-Tao Feng1,2, Xing Zhang3,4, Li-Rong Han5,6.
Abstract
Streptomyces kanasenisi ZX01 was found to produce a novel glycoprotein GP-1 previously, which was secreted into medium and had significant activity against tobacco mosaic virus. However, the low production of GP-1 by strain ZX01 limited its further studies. In order to improve the yield of GP-1, a series of statistical experimental design methods were applied to optimize medium of strain ZX01 in this work. Millet medium was chosen to be the optimal original medium for optimization. Soluble starch and yeast extract were identified as the optimal carbon and nitrogen source using one-factor-at-a-time method. Response surface methodology was used to optimize medium compositions (soluble starch, yeast extract and inorganic salts). A higher yield of GP-1 was 601.33 µg/L after optimization. The optimal compositions of medium were: soluble starch 13.61 g/L, yeast extract 4.19 g/L, NaCl 3.54 g/L, CaCO3 0.28 g/L, millet, 10 g/L. The yield of GP-1 in a 5 L fermentor using optimized medium was 2.54 mg/L, which is much higher than the result of shake flask. This work will be helpful for the improvement of GP-1 production on a large scale and lay a foundation for developing it to be a novel anti-plant virus agent.Entities:
Keywords: Anti-TMV; Glycoprotein; Optimization; Response surface methodology; Streptomyces
Year: 2017 PMID: 28050846 PMCID: PMC5209317 DOI: 10.1186/s13568-016-0316-7
Source DB: PubMed Journal: AMB Express ISSN: 2191-0855 Impact factor: 3.298
Effect of different carbon and nitrogen sources on the yield of GP-1 by strain ZX01
| Carbon sources | The yield of GP-1 (µg/L) | Nitrogen sources | The yield of GP-1 (µg/L) |
|---|---|---|---|
| Soluble starch | 482.36a | Yeast extract | 534.83a |
| Lactose | 438.14ab | Peptone | 500.67ab |
| Sucrose | 427.83bc | Soy peptone | 471.42b |
| Fructose | 407.93bc | Tryptone | 456.71b |
| Glucose | 366.56c | Beef extract | 452.75b |
| Maltose | 363.12c | Fish meal | 378.58c |
| Glycerol | 211.28d | Urea | 352.20c |
Data in the table were average of three replicates, and different letters in each column indicated significant differences at the 5% level by Duncan’s multiple comparison
The levels of the independent variables through CCD
| Factors | Variables | Levels | ||||
|---|---|---|---|---|---|---|
| −1.682 | −1 | 0 | 1 | 1.682 | ||
| Soluble starch (g/L) |
| 5.0 | 7.0 | 10.0 | 13.0 | 15.0 |
| Yeast extract (g/L) |
| 1.3 | 2.0 | 3.0 | 4.0 | 4.7 |
| Inorganic salts (g/L) |
| 1.0 | 1.7 | 2.7 | 3.7 | 4.4 |
x i = coded value of the variable X i
x 1 = (soluble starch-10)/3; x 2 = (yeast extract-3)/1; x 3 = (inorganic salts-2.7)/1
Effect of different media on the yield of GP-1 by strain ZX01
| Media | The yield of GP-1 (µg/L) |
|---|---|
| Millet | 345.35a |
| MBB | 280.47b |
| ISP2 | 264.31b |
| BB | 260.34b |
| ISP3 | 244.60bc |
| ISP5 | 240.26bc |
| ISP4 | 225.23c |
| Gause’s No. 1 | 190.74cd |
| PDA | 185.04cd |
| ISP1 | 177.52d |
Data in the table were average of three replicates, and different letters in each column indicated significant differences at the 5% level by Duncan’s multiple comparison
Experimental design by using CCD, experimental value and predicted value
| Run |
|
|
| Experimental value (µg/L) | Predicted value (µg/L) | Residual |
|---|---|---|---|---|---|---|
| 1 | −1 | 1 | 1 | 482.32 | 483.16 | −0.84 |
| 2 | 0 | 0 | 0 | 536.84 | 539.66 | −2.82 |
| 3 | 0 | 0 | 0 | 534.15 | 539.66 | −5.51 |
| 4 | −1 | −1 | 1 | 397.65 | 407.10 | −9.45 |
| 5 | 0 | 0 | 0 | 545.20 | 539.66 | 5.54 |
| 6 | 1 | −1 | −1 | 500.43 | 507.12 | −6.69 |
| 7 | −1 | 1 | −1 | 438.56 | 450.54 | −11.98 |
| 8 | 0 | −1.682 | 0 | 465.94 | 459.06 | 6.88 |
| 9 | 0 | 0 | 0 | 532.35 | 539.66 | −7.31 |
| 10 | 0 | 0 | 0 | 538.06 | 539.66 | −1.60 |
| 11 | −1 | −1 | −1 | 411.17 | 417.12 | −5.95 |
| 12 | 0 | 1.682 | 0 | 445.41 | 541.61 | 3.80 |
| 13 | 0 | 0 | −1.682 | 486.10 | 476.23 | 9.87 |
| 14 | 1 | −1 | 1 | 529.24 | 524.82 | 4.42 |
| 15 | 0 | 0 | 0 | 549.52 | 539.66 | 9.86 |
| 16 | 1.682 | 0 | 0 | 556.87 | 559.33 | −2.46 |
| 17 | −1.682 | 0 | 0 | 407.31 | 394.15 | 13.16 |
| 18 | 1 | 1 | −1 | 531.13 | 529.22 | 1.19 |
| 19 | 1 | 1 | 1 | 587.96 | 589.56 | −1.60 |
| 20 | 0 | 0 | 1.682 | 519.37 | 518.55 | 0.82 |
The ANOVA of the quadratic model
| Source | Sum of squares | Degree of freedom | Mean square | F value | P value (Prob > F) |
|---|---|---|---|---|---|
| Model | 55,788.72 | 9 | 6198.75 | 68.92 | <0.0001 |
| Residual | 899.41 | 10 | 89.94 | ||
| Lack of fit | 677.75 | 5 | 135.55 | 3.06 | 0.1227 |
| Pure error | 221.66 | 5 | 44.33 | ||
| Total | 56,688.13 | 19 |
R 2 = 0.9841, adjusted R 2 = 0.9699, CV = 3.11%
Estimated regression coefficient and corresponding t value and P value
| Factor | Coefficient estimate | Standard error |
|
|
|---|---|---|---|---|
| Intercept | 539.66 | 3.87 | – | – |
|
| 49.10 | 2.57 | 366.11 | <0.0001 |
|
| 24.54 | 2.57 | 91.44 | <0.0001 |
|
| 12.58 | 2.57 | 24.04 | 0.0006 |
|
| −2.83 | 3.35 | 0.71 | 0.4184 |
|
| 6.93 | 3.35 | 4.27 | 0.0658 |
|
| 10.66 | 3.35 | 10.11 | 0.0098 |
|
| −22.24 | 2.50 | 79.25 | <0.0001 |
|
| −13.90 | 2.50 | 30.96 | 0.0002 |
|
| −14.94 | 2.50 | 35.76 | 0.0001 |
Fig. 1Contour plot and response surface plot of GP-1 yield: the combined effect of soluble starch and yeast extract on the yield of GP-1
Fig. 2Contour plot and response surface plot of GP-1 yield: the combined effect of soluble starch and inorganic salts on the yield of GP-1
Fig. 3Contour plot and response surface plot of GP-1 yield: the combined effect of yeast extract and inorganic salts on the yield of GP-1
Fig. 4Time course of GP-1 production and DCW by S. kanasenisi ZX01 using optimized medium in 5 L fermentor (squares is GP-1 production, circles is DCW)