Literature DB >> 28049645

Synthetic DNA Synthesis and Assembly: Putting the Synthetic in Synthetic Biology.

Randall A Hughes1, Andrew D Ellington2.   

Abstract

The chemical synthesis of DNA oligonucleotides and their assembly into synthons, genes, circuits, and even entire genomes by gene synthesis methods has become an enabling technology for modern molecular biology and enables the design, build, test, learn, and repeat cycle underpinning innovations in synthetic biology. In this perspective, we briefly review the techniques and technologies that enable the synthesis of DNA oligonucleotides and their assembly into larger DNA constructs with a focus on recent advancements that have sought to reduce synthesis cost and increase sequence fidelity. The development of lower-cost methods to produce high-quality synthetic DNA will allow for the exploration of larger biological hypotheses by lowering the cost of use and help to close the DNA read-write cost gap.
Copyright © 2017 Cold Spring Harbor Laboratory Press; all rights reserved.

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Year:  2017        PMID: 28049645      PMCID: PMC5204324          DOI: 10.1101/cshperspect.a023812

Source DB:  PubMed          Journal:  Cold Spring Harb Perspect Biol        ISSN: 1943-0264            Impact factor:   10.005


  58 in total

1.  A systematic comparison of error correction enzymes by next-generation sequencing.

Authors:  Nathan B Lubock; Di Zhang; Angus M Sidore; George M Church; Sriram Kosuri
Journal:  Nucleic Acids Res       Date:  2017-09-06       Impact factor: 16.971

2.  Modelling co-translational dimerization for programmable nonlinearity in synthetic biology.

Authors:  Ruud Stoof; Ángel Goñi-Moreno
Journal:  J R Soc Interface       Date:  2020-11-04       Impact factor: 4.118

3.  Multiplexed gene synthesis in emulsions for exploring protein functional landscapes.

Authors:  Calin Plesa; Angus M Sidore; Nathan B Lubock; Di Zhang; Sriram Kosuri
Journal:  Science       Date:  2018-01-04       Impact factor: 47.728

4.  A high storage density strategy for digital information based on synthetic DNA.

Authors:  Shufang Zhang; Beibei Huang; Xiangming Song; Tao Zhang; Hanjie Wang; Yuhong Liu
Journal:  3 Biotech       Date:  2019-08-24       Impact factor: 2.406

Review 5.  Towards systems tissue engineering: Elucidating the dynamics, spatial coordination, and individual cells driving emergent behaviors.

Authors:  Matthew S Hall; Joseph T Decker; Lonnie D Shea
Journal:  Biomaterials       Date:  2020-06-14       Impact factor: 12.479

6.  Characterization of Functionally Associated miRNAs in Glioblastoma and their Engineering into Artificial Clusters for Gene Therapy.

Authors:  Vivek Bhaskaran; Pierpaolo Peruzzi
Journal:  J Vis Exp       Date:  2019-10-04       Impact factor: 1.355

7.  Screening Strategies for Biosurfactant Discovery.

Authors:  Marla Trindade; Nombuso Sithole; Sonja Kubicki; Stephan Thies; Anita Burger
Journal:  Adv Biochem Eng Biotechnol       Date:  2022       Impact factor: 2.635

8.  Stereospecific synthesis of phosphatidylglycerol using a cyanoethyl phosphoramidite precursor.

Authors:  Zachary J Struzik; Ashley N Weerts; Judith Storch; David H Thompson
Journal:  Chem Phys Lipids       Date:  2020-06-11       Impact factor: 3.329

9.  Efficient Genome Engineering of a Virulent Klebsiella Bacteriophage Using CRISPR-Cas9.

Authors:  Juntao Shen; Jinjie Zhou; Guo-Qiang Chen; Zhi-Long Xiu
Journal:  J Virol       Date:  2018-08-16       Impact factor: 5.103

10.  Synthetic biology for fibres, adhesives and active camouflage materials in protection and aerospace.

Authors:  Aled D Roberts; William Finnigan; Emmanuel Wolde-Michael; Paul Kelly; Jonny J Blaker; Sam Hay; Rainer Breitling; Eriko Takano; Nigel S Scrutton
Journal:  MRS Commun       Date:  2019-04-24       Impact factor: 2.566

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