| Literature DB >> 28039484 |
Mancheng Gong1, Wenjing Dong2, Zhirong Shi3, Shaopeng Qiu4, Runqiang Yuan1.
Abstract
BACKGROUND: Vascular endothelial growth factor (VEGF) protein plays important role in renal cell carcinoma (RCC) development and progression. VEGF gene polymorphisms can alter the protein concentrations and might be associated with renal cell carcinoma risk. However, the results of studies investigating the association between VEGF polymorphisms and renal cell carcinoma risk are inconsistent. Thus, a meta-analysis was performed.Entities:
Keywords: VEGF; gene polymorphism; meta-analysis; renal cell carcinoma; vascular endothelial growth factor
Mesh:
Substances:
Year: 2017 PMID: 28039484 PMCID: PMC5352413 DOI: 10.18632/oncotarget.14263
Source DB: PubMed Journal: Oncotarget ISSN: 1949-2553
Figure 1Flow diagram of the study selection
Characteristics of eligible studies in the meta-analysis of VEGF polymorphisms and RCC risk
| Author | Year | Quality scores | Ethnicity | Design | Cases total | CC | CT | TT | Controls total | CC | CT | TT | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Abe A[ | 2002 | 5 | Asian | HB | 145 | 97 | 41 | 7 | 145 | 90 | 52 | 3 | 0.146 |
| Bruyère F[ | 2010 | 5 | Caucasian | PB | 47 | 29 | 17 | 1 | 196 | 141 | 53 | 2 | 0.218 |
| Sáenz-López P[ | 2013 | 6 | Caucasian | PB | 215 | 156 | 57 | 2 | 280 | 200 | 73 | 7 | 0.912 |
| Shen BL[ | 2015 | 5 | Asian | HB | 360 | 224 | 81 | 55 | 359 | 240 | 73 | 46 | 0.000 |
| Lu GJ[ | 2015 | 5 | Asian | HB | 412 | 262 | 91 | 59 | 825 | 554 | 166 | 105 | 0.000 |
| Xian W[ | 2015 | 5 | Asian | HB | 266 | 70 | 127 | 69 | 532 | 196 | 236 | 100 | 0.056 |
| Ajaz S[ | 2011 | 5 | Asian | NA | 143 | 30 | 81 | 32 | 106 | 44 | 41 | 21 | 0.053 |
| Sáenz-López P[ | 2013 | 6 | Caucasian | PB | 216 | 54 | 114 | 48 | 272 | 77 | 142 | 53 | 0.388 |
| Shen BL[ | 2015 | 5 | Asian | HB | 360 | 150 | 149 | 61 | 360 | 178 | 141 | 41 | 0.111 |
| Lu GJ[ | 2015 | 5 | Asian | HB | 412 | 171 | 174 | 67 | 824 | 397 | 332 | 95 | 0.047 |
| Xian W[ | 2015 | 5 | Asian | HB | 266 | 99 | 119 | 48 | 532 | 243 | 225 | 64 | 0.287 |
| Abe A[ | 2002 | 5 | Asian | HB | 145 | 113 | 31 | 1 | 145 | 109 | 33 | 3 | 0.788 |
| Shen BL[ | 2015 | 5 | Asian | HB | 361 | 152 | 170 | 39 | 360 | 166 | 164 | 30 | 0.234 |
| Lu GJ[ | 2015 | 5 | Asian | HB | 412 | 172 | 191 | 49 | 825 | 365 | 375 | 85 | 0.431 |
| Bruyère F[ | 2010 | 5 | Caucasian | PB | 49 | 19 | 29 | 1 | 202 | 47 | 109 | 46 | 0.260 |
| Sáenz-López P[ | 2013 | 6 | Caucasian | PB | 216 | 56 | 111 | 49 | 273 | 77 | 138 | 58 | 0.793 |
| Lu GJ[ | 2015 | 5 | Asian | HB | 412 | 228 | 93 | 91 | 824 | 513 | 168 | 143 | 0.000 |
| Shen BL[ | 2015 | 5 | Asian | HB | 360 | 121 | 170 | 69 | 360 | 134 | 163 | 63 | 0.273 |
| Lu GJ[ | 2015 | 5 | Asian | HB | 412 | 139 | 194 | 79 | 824 | 299 | 377 | 148 | 0.127 |
| Xian W[ | 2015 | 5 | Asian | HB | 266 | 30 | 132 | 104 | 532 | 49 | 256 | 227 | 0.053 |
| Bruyère F[ | 2010 | 5 | Caucasian | PB | 48 | 15 | 25 | 8 | 198 | 86 | 92 | 20 | 0.522 |
| Sáenz-López P[ | 2013 | 6 | Caucasian | PB | 214 | 101 | 93 | 20 | 279 | 129 | 118 | 32 | 0.528 |
| Ricketts C[ | 2009 | 6 | Caucasian | PB | 324 | 134 | 143 | 47 | 314 | 146 | 130 | 38 | 0.281 |
| Bruyère F[ | 2010 | 5 | Caucasian | PB | 49 | 27 | 17 | 5 | 202 | 94 | 83 | 25 | 0.322 |
HB, hospital-based controls; HWE, Hardy-Weinberg equilibrium.
Quality assessment based on the Newcastle-Ottawa Scale of studies included in this meta-analysis
| Author | Year | Adequate definition of case | Representativeness of cases | Selection of control | Definition of control | Control for important factor or additional factor | Exposure assessment | Same method of ascertainment for cases and controls | Nonresponse rate | Total quality scores |
|---|---|---|---|---|---|---|---|---|---|---|
| Abe A[ | 2002 | ★ | ★ | ★ | ★ | ★ | 5 | |||
| Bruyère F[ | 2010 | ★ | ★ | ★ | ★ | ★ | 5 | |||
| Sáenz-López P[ | 2013 | ★ | ★ | ★ | ★ | ★ | ★ | 6 | ||
| Shen BL[ | 2015 | ★ | ★ | ★ | ★ | ★ | 5 | |||
| Lu GJ[ | 2015 | ★ | ★ | ★ | ★ | ★ | 5 | |||
| Xian W[ | 2015 | ★ | ★ | ★ | ★ | ★ | 5 | |||
| Ajaz S[ | 2011 | ★ | ★ | ★ | ★ | ★ | 5 | |||
| Ricketts C[ | 2009 | ★ | ★ | ★ | ★ | ★ | ★ | 6 |
A study can be awarded a maximum of one star for each numbered item except for the item Control for important factor or additional factor.
A maximum of two stars can be awarded for Control for important factor or additional factor.
Figure 2Forest plots of the +936C/T (rs3025039) polymorphism and RCC risk
The squares and horizontal lines correspond to the study-specific ORs and 95% CIs. The areas of the squares reflect the study-specific weights (which was the inverse of the variance). The diamonds represent the pooled ORs and 95% CIs.
Figure 3Forest plots of the −2578C/A (rs699947) polymorphism and RCC risk
The squares and horizontal lines correspond to the study-specific ORs and 95% CIs. The areas of the squares reflect the study-specific weights (which were the inverse of the variance). Diamonds represent the pooled ORs and 95% CIs.
Summary of meta-analysis of VEGF polymorphisms and RCC risk
| Polymorphism | No. of studies | No. of cases | No. of controls | Contrast | OR (95% CI) | Statistical method | I2% | |
|---|---|---|---|---|---|---|---|---|
| +936C/T | 6 | 1,445 | 2,337 | TT vs. CC | 1.38(1.11-1.72) | Fixed | 25.3 | 0.004 |
| (rs3025039) | TT vs. CT+CC | 1.28(1.04-1.57) | Fixed | 0.0 | 0.019 | |||
| TT+CT vs. CC | 1.21(1.05-1.39) | Fixed | 38.7 | 0.010 | ||||
| CT vs. CC | 1.17(1.00-1.37) | Fixed | 25.3 | 0.056 | ||||
| T vs. C | 1.20(1.07-1.34) | Fixed | 32.0 | 0.001 | ||||
| −2578C/A | 5 | 1,397 | 2,094 | AA vs. CC | 1.69(1.37-2.07) | Fixed | 0.0 | 0.000 |
| (rs699947) | AA vs. CA+CC | 1.43(1.19-1.73) | Fixed | 0.0 | 0.000 | |||
| AA+CA vs. CC | 1.39(1.21-1.61) | Fixed | 34.8 | 0.000 | ||||
| CA vs. CC | 1.31(1.12-1.52) | Fixed | 47.1 | 0.001 | ||||
| A vs. C | 1.31(1.19-1.45) | Fixed | 0.0 | 0.000 | ||||
| +1612G/A | 3 | 918 | 1,330 | AA vs. GG | 1.25(0.92-1.71) | Fixed | 0.0 | 0.159 |
| (rs10434) | AA vs. GA+GG | 1.20(0.89-1.61) | Fixed | 0.0 | 0.234 | |||
| AA+GA vs. GG | 1.10(0.92-1.31) | Fixed | 0.0 | 0.280 | ||||
| GA vs. GG | 1.08(0.90-1.30) | Fixed | 0.0 | 0.423 | ||||
| A vs. G | 1.10(0.96-1.25) | Fixed | 0.0 | 0.178 | ||||
| −460T/C | 3 | 677 | 1,299 | CC vs. TT | 0.88(0.38-2.01) | Random | 80.6 | 0.758 |
| (rs833061) | CC vs. TC+TT | 0.93(0.47-1.84) | Random | 77.9 | 0.830 | |||
| CC+TC vs. TT | 0.98(0.61-1.58) | Random | 75.5 | 0.928 | ||||
| TC vs. TT | 1.12(0.89-1.41) | Fixed | 31.0 | 0.343 | ||||
| C vs. T | 0.92(0.58-1.46) | Random | 87.9 | 0.720 | ||||
| −634G/C | 3 | 1,038 | 1,716 | CC vs. GG | 1.07(0.84-1.35) | Fixed | 16.4 | 0.581 |
| (rs2010963) | CC vs. GC+GG | 1.00(0.83-1.20) | Fixed | 0.0 | 1.000 | |||
| CC+GC vs. GG | 1.09(0.91-1.30) | Fixed | 0.0 | 0.370 | ||||
| GC vs. GG | 1.08(0.89-1.31) | Fixed | 0.0 | 0.429 | ||||
| C vs. G | 1.03(0.92-1.16) | Fixed | 27.7 | 0.571 | ||||
| −405G/C | 2 | 262 | 477 | CC vs. GG | 1.26(0.45-3.51) | Random | 68.4 | 0.661 |
| (rs2010963) | CC vs. GC+GG | 1.11(0.51-2.41) | Random | 54.5 | 0.796 | |||
| CC+GC vs. GG | 1.18(0.70-2.01) | Random | 52.5 | 0.536 | ||||
| GC vs. GG | 1.11(0.80-1.55) | Fixed | 13.0 | 0.532 | ||||
| C vs. G | 1.14(0.72-1.79) | Random | 67.0 | 0.584 | ||||
| −1154G/A | 2 | 373 | 516 | AA vs. GG | 1.19(0.77-1.84) | Fixed | 19.9 | 0.435 |
| (rs1570360) | AA vs. GA+GG | 1.14(0.76-1.73) | Fixed | 0.0 | 0.528 | |||
| AA+GA vs. GG | 1.00(0.59-1.69) | Random | 58.1 | 0.994 | ||||
| GA vs. GG | 1.08(0.80-1.46) | Fixed | 45.3 | 0.611 | ||||
| A vs. G | 1.01(0.68-1.51) | Random | 57.1 | 0.948 |
Characteristics and results of the present study compared with the previous meta-analysis
| Polymorphism | Contrast | No. of studies | No. of cases | No. of controls | Overall results | ||||
|---|---|---|---|---|---|---|---|---|---|
| previous | present | previous | present | previous | present | previous | present | ||
| +936C/T | TT vs. CC | 3 | 6 | 407 | 1,445 | 621 | 2,337 | – | + |
| (rs3025039) | TT vs. CT+CC | – | + | ||||||
| TT+CT vs. CC | – | + | |||||||
| CT vs. CC | – | – | |||||||
| T vs. C | – | + | |||||||
| −2578C/A | AA vs. CC | 2 | 5 | 359 | 1,397 | 378 | 2,094 | + | + |
| (rs699947) | AA vs. CA+CC | – | + | ||||||
| AA+CA vs. CC | – | + | |||||||
| CA vs. CC | – | + | |||||||
| A vs. C | + | + | |||||||
| +1612G/A | AA vs. GG | NA | 3 | NA | 918 | NA | 1,330 | NA | – |
| (rs10434) | AA vs. GA+GG | NA | – | ||||||
| AA+GA vs. GG | NA | – | |||||||
| GA vs. GG | NA | – | |||||||
| A vs. G | NA | – | |||||||
| −460T/C | CC vs. TT | 2 | 3 | 265 | 677 | 475 | 1,299 | – | – |
| (rs833061) | CC vs. TC+TT | – | – | ||||||
| CC+TC vs. TT | – | – | |||||||
| TC vs. TT | – | – | |||||||
| C vs. T | – | – | |||||||
| −634G/C | CC vs. GG | NA | 3 | NA | 1,038 | NA | 1,716 | NA | – |
| (rs2010963) | CC vs. GC+GG | NA | – | ||||||
| CC+GC vs. GG | NA | – | |||||||
| GC vs. GG | NA | – | |||||||
| C vs. G | NA | – | |||||||
| −405G/C | CC vs. GG | 2 | 2 | 262 | 262 | 477 | 477 | – | – |
| (rs2010963) | CC vs. GC+GG | – | – | ||||||
| CC+GC vs. GG | – | – | |||||||
| GC vs. GG | – | – | |||||||
| C vs. G | – | – | |||||||
| −1154G/A | AA vs. GG | 2 | 2 | 373 | 373 | 516 | 516 | – | – |
| (rs1570360) | AA vs. GA+GG | – | – | ||||||
| AA+GA vs. GG | – | – | |||||||
| GA vs. GG | – | – | |||||||
| A vs. G | – | – | |||||||