Literature DB >> 28038326

Design, synthesis, and evaluation of a novel series of macrocyclic inhibitors of norovirus 3CL protease.

Vishnu C Damalanka1, Yunjeong Kim2, Anushka C Galasiti Kankanamalage1, Gerald H Lushington3, Nurjahan Mehzabeen4, Kevin P Battaile5, Scott Lovell4, Kyeong-Ok Chang6, William C Groutas7.   

Abstract

Norovirus infections have a major impact on public health worldwide, yet there is a current dearth of norovirus-specific therapeutics and prophylactics. This report describes the discovery of a novel class of macrocyclic inhibitors of norovirus 3C-like protease, a cysteine protease that is essential for virus replication. SAR, structural, and biochemical studies were carried out to ascertain the effect of structure on pharmacological activity and permeability. Insights gained from these studies have laid a solid foundation for capitalizing on the therapeutic potential of the series of inhibitors described herein.
Copyright © 2016 Elsevier Masson SAS. All rights reserved.

Entities:  

Keywords:  3CLprotease; Macrocyclic inhibitors; Norovirus

Mesh:

Substances:

Year:  2016        PMID: 28038326      PMCID: PMC5296247          DOI: 10.1016/j.ejmech.2016.12.033

Source DB:  PubMed          Journal:  Eur J Med Chem        ISSN: 0223-5234            Impact factor:   6.514


  58 in total

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Authors:  Nicholas A Meanwell
Journal:  Chem Res Toxicol       Date:  2011-07-26       Impact factor: 3.739

Review 2.  Noroviruses: epidemiology, immunity and prospects for prevention.

Authors:  Kimberly Pringle; Benjamin Lopman; Everardo Vega; Jan Vinje; Umesh D Parashar; Aron J Hall
Journal:  Future Microbiol       Date:  2015       Impact factor: 3.165

3.  On the size of the active site in proteases. I. Papain.

Authors:  I Schechter; A Berger
Journal:  Biochem Biophys Res Commun       Date:  1967-04-20       Impact factor: 3.575

4.  Structure-guided design and optimization of dipeptidyl inhibitors of norovirus 3CL protease. Structure-activity relationships and biochemical, X-ray crystallographic, cell-based, and in vivo studies.

Authors:  Anushka C Galasiti Kankanamalage; Yunjeong Kim; Pathum M Weerawarna; Roxanne Adeline Z Uy; Vishnu C Damalanka; Sivakoteswara Rao Mandadapu; Kevin R Alliston; Nurjahan Mehzabeen; Kevin P Battaile; Scott Lovell; Kyeong-Ok Chang; William C Groutas
Journal:  J Med Chem       Date:  2015-03-19       Impact factor: 7.446

5.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

6.  Broad-spectrum antivirals against 3C or 3C-like proteases of picornaviruses, noroviruses, and coronaviruses.

Authors:  Yunjeong Kim; Scott Lovell; Kok-Chuan Tiew; Sivakoteswara Rao Mandadapu; Kevin R Alliston; Kevin P Battaile; William C Groutas; Kyeong-Ok Chang
Journal:  J Virol       Date:  2012-08-22       Impact factor: 5.103

Review 7.  Antiviral targets of human noroviruses.

Authors:  Bv Venkataram Prasad; Sreejesh Shanker; Zana Muhaxhiri; Lisheng Deng; Jae-Mun Choi; Mary K Estes; Yongcheng Song; Timothy Palzkill; Robert L Atmar
Journal:  Curr Opin Virol       Date:  2016-06-17       Impact factor: 7.090

Review 8.  Scaling and assessment of data quality.

Authors:  Philip Evans
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14

9.  MolProbity: all-atom structure validation for macromolecular crystallography.

Authors:  Vincent B Chen; W Bryan Arendall; Jeffrey J Headd; Daniel A Keedy; Robert M Immormino; Gary J Kapral; Laura W Murray; Jane S Richardson; David C Richardson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-12-21

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

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  7 in total

1.  GII.4 Norovirus Protease Shows pH-Sensitive Proteolysis with a Unique Arg-His Pairing in the Catalytic Site.

Authors:  Mariya A Viskovska; Boyang Zhao; Sreejesh Shanker; Jae-Mun Choi; Lisheng Deng; Yongchen Song; Timothy Palzkill; Liya Hu; Mary K Estes; B V Venkataram Prasad
Journal:  J Virol       Date:  2019-03-05       Impact factor: 5.103

2.  Structure-guided design, synthesis and evaluation of oxazolidinone-based inhibitors of norovirus 3CL protease.

Authors:  Vishnu C Damalanka; Yunjeong Kim; Anushka C Galasiti Kankanamalage; Athri D Rathnayake; Nurjahan Mehzabeen; Kevin P Battaile; Scott Lovell; Harry Nhat Nguyen; Gerald H Lushington; Kyeong-Ok Chang; William C Groutas
Journal:  Eur J Med Chem       Date:  2017-12-06       Impact factor: 6.514

3.  Piperidine carbamate peptidomimetic inhibitors of the serine proteases HGFA, matriptase and hepsin.

Authors:  Vishnu C Damalanka; Scott A Wildman; James W Janetka
Journal:  Medchemcomm       Date:  2019-07-18       Impact factor: 3.597

Review 4.  Antiviral Drug Discovery: Norovirus Proteases and Development of Inhibitors.

Authors:  Kyeong-Ok Chang; Yunjeong Kim; Scott Lovell; Athri D Rathnayake; William C Groutas
Journal:  Viruses       Date:  2019-02-25       Impact factor: 5.048

Review 5.  Norovirus antivirals: Where are we now?

Authors:  Natalie E Netzler; Daniel Enosi Tuipulotu; Peter A White
Journal:  Med Res Rev       Date:  2018-12-25       Impact factor: 12.944

6.  In crystallo-screening for discovery of human norovirus 3C-like protease inhibitors.

Authors:  Jingxu Guo; Alice Douangamath; Weixiao Song; Alun R Coker; A W Edith Chan; Steve P Wood; Jonathan B Cooper; Efrat Resnick; Nir London; Frank von Delft
Journal:  J Struct Biol X       Date:  2020-07-16

Review 7.  Norovirus Protease Structure and Antivirals Development.

Authors:  Boyang Zhao; Liya Hu; Yongcheng Song; Ketki Patil; Sasirekha Ramani; Robert L Atmar; Mary K Estes; B V Venkataram Prasad
Journal:  Viruses       Date:  2021-10-14       Impact factor: 5.048

  7 in total

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