Literature DB >> 25761614

Structure-guided design and optimization of dipeptidyl inhibitors of norovirus 3CL protease. Structure-activity relationships and biochemical, X-ray crystallographic, cell-based, and in vivo studies.

Anushka C Galasiti Kankanamalage1, Yunjeong Kim, Pathum M Weerawarna1, Roxanne Adeline Z Uy1, Vishnu C Damalanka1, Sivakoteswara Rao Mandadapu1, Kevin R Alliston1, Nurjahan Mehzabeen2, Kevin P Battaile3, Scott Lovell2, Kyeong-Ok Chang, William C Groutas1.   

Abstract

Norovirus infection constitutes the primary cause of acute viral gastroenteritis. There are currently no vaccines or norovirus-specific antiviral therapeutics available for the management of norovirus infection. Norovirus 3C-like protease is essential for viral replication, consequently, inhibition of this enzyme is a fruitful avenue of investigation that may lead to the emergence of antinorovirus therapeutics. We describe herein the optimization of dipeptidyl inhibitors of norovirus 3C-like protease using iterative SAR, X-ray crystallographic, and enzyme and cell-based studies. We also demonstrate herein in vivo efficacy of an inhibitor using the murine model of norovirus infection.

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Year:  2015        PMID: 25761614      PMCID: PMC4484267          DOI: 10.1021/jm5019934

Source DB:  PubMed          Journal:  J Med Chem        ISSN: 0022-2623            Impact factor:   7.446


  51 in total

1.  Cyclosulfamide-based derivatives as inhibitors of noroviruses.

Authors:  Dengfeng Dou; Sivakoteswara R Mandadapu; Kevin R Alliston; Yunjeong Kim; Kyeong-Ok Chang; William C Groutas
Journal:  Eur J Med Chem       Date:  2011-10-20       Impact factor: 6.514

2.  Gastroenteritis in US Marines during Operation Iraqi Freedom.

Authors:  Scott A Thornton; Sterling S Sherman; Tibor Farkas; Weiming Zhong; Pete Torres; Xi Jiang
Journal:  Clin Infect Dis       Date:  2005-01-20       Impact factor: 9.079

3.  Inhibition of noroviruses by piperazine derivatives.

Authors:  Dengfeng Dou; Guijia He; Sivakoteswara Rao Mandadapu; Sridhar Aravapalli; Yunjeong Kim; Kyeong-Ok Chang; William C Groutas
Journal:  Bioorg Med Chem Lett       Date:  2011-11-15       Impact factor: 2.823

4.  Design, synthesis, and evaluation of inhibitors of Norwalk virus 3C protease.

Authors:  Kok-Chuan Tiew; Guijia He; Sridhar Aravapalli; Sivakoteswara Rao Mandadapu; Mallikarjuna Reddy Gunnam; Kevin R Alliston; Gerald H Lushington; Yunjeong Kim; Kyeong-Ok Chang; William C Groutas
Journal:  Bioorg Med Chem Lett       Date:  2011-07-14       Impact factor: 2.823

5.  On the size of the active site in proteases. I. Papain.

Authors:  I Schechter; A Berger
Journal:  Biochem Biophys Res Commun       Date:  1967-04-20       Impact factor: 3.575

Review 6.  Halogen bonding for rational drug design and new drug discovery.

Authors:  Yunxiang Lu; Yingtao Liu; Zhijian Xu; Haiying Li; Honglai Liu; Weiliang Zhu
Journal:  Expert Opin Drug Discov       Date:  2012-03-30       Impact factor: 6.098

7.  Potent norovirus inhibitors based on the acyclic sulfamide scaffold.

Authors:  Dengfeng Dou; Kok-Chuan Tiew; Sivakoteswara Rao Mandadapu; Mallikarjuna Reddy Gunnam; Kevin R Alliston; Yunjeong Kim; Kyeong-Ok Chang; William C Groutas
Journal:  Bioorg Med Chem       Date:  2012-02-02       Impact factor: 3.641

8.  alpha-Hydroxy phosphinyl-based inhibitors of human renin.

Authors:  D V Patel; K Rielly-Gauvin; D E Ryono; C A Free; W L Rogers; S A Smith; J M DeForrest; R S Oehl; E W Petrillo
Journal:  J Med Chem       Date:  1995-10-27       Impact factor: 7.446

9.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

10.  Inhibition of norovirus 3CL protease by bisulfite adducts of transition state inhibitors.

Authors:  Sivakoteswara Rao Mandadapu; Mallikarjuna Reddy Gunnam; Kok-Chuan Tiew; Roxanne Adeline Z Uy; Allan M Prior; Kevin R Alliston; Duy H Hua; Yunjeong Kim; Kyeong-Ok Chang; William C Groutas
Journal:  Bioorg Med Chem Lett       Date:  2012-11-21       Impact factor: 2.823

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  29 in total

1.  Putative structural rearrangements associated with the interaction of macrocyclic inhibitors with norovirus 3CL protease.

Authors:  Anushka C Galasiti Kankanamalage; Pathum M Weerawarna; Athri D Rathnayake; Yunjeong Kim; Nurjahan Mehzabeen; Kevin P Battaile; Scott Lovell; Kyeong-Ok Chang; William C Groutas
Journal:  Proteins       Date:  2019-04-01

Review 2.  Current tools for norovirus drug discovery.

Authors:  Sahani Weerasekara; Allan M Prior; Duy H Hua
Journal:  Expert Opin Drug Discov       Date:  2016-05-02       Impact factor: 6.098

3.  Structure-guided design, synthesis and evaluation of oxazolidinone-based inhibitors of norovirus 3CL protease.

Authors:  Vishnu C Damalanka; Yunjeong Kim; Anushka C Galasiti Kankanamalage; Athri D Rathnayake; Nurjahan Mehzabeen; Kevin P Battaile; Scott Lovell; Harry Nhat Nguyen; Gerald H Lushington; Kyeong-Ok Chang; William C Groutas
Journal:  Eur J Med Chem       Date:  2017-12-06       Impact factor: 6.514

4.  Design, synthesis, and evaluation of a novel series of macrocyclic inhibitors of norovirus 3CL protease.

Authors:  Vishnu C Damalanka; Yunjeong Kim; Anushka C Galasiti Kankanamalage; Gerald H Lushington; Nurjahan Mehzabeen; Kevin P Battaile; Scott Lovell; Kyeong-Ok Chang; William C Groutas
Journal:  Eur J Med Chem       Date:  2016-12-21       Impact factor: 6.514

5.  Structure-based exploration and exploitation of the S4 subsite of norovirus 3CL protease in the design of potent and permeable inhibitors.

Authors:  Anushka C Galasiti Kankanamalage; Yunjeong Kim; Athri D Rathnayake; Vishnu C Damalanka; Pathum M Weerawarna; Sean T Doyle; Amer F Alsoudi; D M Padmasankha Dissanayake; Gerald H Lushington; Nurjahan Mehzabeen; Kevin P Battaile; Scott Lovell; Kyeong-Ok Chang; William C Groutas
Journal:  Eur J Med Chem       Date:  2016-11-14       Impact factor: 6.514

Review 6.  Recent Advances in the Discovery of Norovirus Therapeutics.

Authors:  Yunjeong Kim; Anushka C Galasiti Kankanamalage; Kyeong-Ok Chang; William C Groutas
Journal:  J Med Chem       Date:  2015-08-17       Impact factor: 7.446

Review 7.  Anti-norovirus therapeutics: a patent review (2010-2015).

Authors:  Anushka C Galasiti Kankanamalage; Pathum M Weerawarna; Yunjeong Kim; Kyeong-Ok Chang; William C Groutas
Journal:  Expert Opin Ther Pat       Date:  2016       Impact factor: 6.674

8.  Norovirus vaccines and potential antinorovirus drugs: recent advances and future perspectives.

Authors:  Jacob Kocher; Lijuan Yuan
Journal:  Future Virol       Date:  2015       Impact factor: 1.831

Review 9.  Antiviral targets of human noroviruses.

Authors:  Bv Venkataram Prasad; Sreejesh Shanker; Zana Muhaxhiri; Lisheng Deng; Jae-Mun Choi; Mary K Estes; Yongcheng Song; Timothy Palzkill; Robert L Atmar
Journal:  Curr Opin Virol       Date:  2016-06-17       Impact factor: 7.090

10.  Oxadiazole-Based Cell Permeable Macrocyclic Transition State Inhibitors of Norovirus 3CL Protease.

Authors:  Vishnu C Damalanka; Yunjeong Kim; Kevin R Alliston; Pathum M Weerawarna; Anushka C Galasiti Kankanamalage; Gerald H Lushington; Nurjahan Mehzabeen; Kevin P Battaile; Scott Lovell; Kyeong-Ok Chang; William C Groutas
Journal:  J Med Chem       Date:  2016-02-08       Impact factor: 7.446

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