| Literature DB >> 28029589 |
Rupesh Kumar Sinha1, Kottekkatu Padinchati Krishnan2, Ammanamveetil Abdulla Mohamed Hatha3, Mujeeb Rahiman3, Divya David Thresyamma2, Savita Kerkar4.
Abstract
The diversity and abundance of retrievable pelagic heterotrophic bacteria in Kongsfjorden, an Arctic fjord, was studied during the summer of 2011 (June, August, and September). Retrievable bacterial load ranged from 103 to 107CFUL-1 in June, while it was 104-106CFUL-1 in August and September. Based on 16S rRNA gene sequence similarities, a higher number of phylotypes was observed during August (22 phylotypes) compared to that during June (6 phylotypes) and September (12 phylotypes). The groups were classified into four phyla: Firmicutes, Actinobacteria, Proteobacteria, and Bacteroidetes. Bacteroidetes was represented only by a single member Leewenhoekiella aequorea during the three months and was dominant (40%) in June. However, this dominance changed in August to a well-known phytopathogenic species Rhodococcus fascians (32%), which could be a result of decrease in the phytoplankton biomass following the secondary bloom. It is the first report of Halomonas titanicae isolation from the Arctic waters. It showed an increase in its abundance with the intrusion of Atlantic water into Kongsfjorden. Increased abundance of Psychrobacter species in the late summer months coincided with the presence of cooler waters. Thus, the composition and function of heterotrophic bacterial community was fundamentally different in different months. This could be linked to the changes in the water masses and/or phytoplankton bloom dynamics occurring in Arctic summer.Entities:
Keywords: 16S rRNA; Arctic fjord; Kongsfjorden; Retrievable heterotrophic bacteria
Mesh:
Substances:
Year: 2016 PMID: 28029589 PMCID: PMC5221401 DOI: 10.1016/j.bjm.2016.09.011
Source DB: PubMed Journal: Braz J Microbiol ISSN: 1517-8382 Impact factor: 2.476
Fig. 1Bathymetric map of Kongsfjorden with sampling locations. Samples were collected from 16 stations. Stations 1–9 along the fjord and stations 3.1–3.4 and 7.1–7.3 at the intersection of station 3 and 7, respectively.
Fig. 2Physiochemical properties of water samples collected from Kongsfjorden in June (A), August (B), and September (C) 2011.
Fig. 3Percentage composition and abundance of heterotrophic bacterial species belonging to the phylum Firmicutes (), Actinobacteria (), α-Proteobacteria (), γ-Proteobacteria () and Bacteroidetes () isolated from Kongsfjorden water samples during June, August, and September 2011.
Fig. 4Phylogenetic tree constructed on the basis of 16S rRNA gene sequences showing the relationship among the bacterial strains (prefix with Kongs), obtained from the water samples collected during June (A), August (B) and September (C) 2011 from Kongsfjorden, with their nearest phylogenetic type strains. The accession number of 16s rRNA gene sequence of the strains is denoted next to its name. Phylogenetic tree was constructed by maximum likelihood method. Numbers shown at nodes are bootstrap values. The bar represents 0.02 substitutions per alignment position.