Literature DB >> 2802664

An automatic analysis method for in situ hybridization using high-resolution image analysis.

W Stolz1, K Scharffetter, W Abmayr, W Köditz, T Krieg.   

Abstract

Specific mRNA for alpha 1 (I) collagen has been detected on a cellular level by in situ hybridization using radioactively labelled alpha 1 (I) antisense RNA probes. We here present an automatic, quantitative, evaluation technique for the determination of grain densities using the high-resolution image analysis system IPS KONTRON. The reliability and objectivity of this method were evaluated by comparing the values of grains per cell obtained by conventional and automatic techniques following in situ hybridization with alpha 1 (I) collagen DNA probes in various specimens. The correlation coefficients between conventional and automatic analysis of grain densities were 0.97 for fibroblasts embedded into a three-dimensional collagen gel, 0.94 for dermal fibroblasts in skin obtained from a patient with progressive systemic scleroderma, and 0.90 for fibroblasts in a 2-week-old scar. All correlation coefficients were significant on the P less than 0.0001 level. This new analysis technique therefore allows a more rapid and reliable quantitative evaluation of in situ hybridization and may also be helpful in differentiating between various cell populations characterized by different biosynthetic capacities.

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Year:  1989        PMID: 2802664     DOI: 10.1007/bf00412978

Source DB:  PubMed          Journal:  Arch Dermatol Res        ISSN: 0340-3696            Impact factor:   3.017


  22 in total

1.  Computerized interactive morphometry in pathology: current instrumentation and methods.

Authors:  A M Marchevsky; J Gil; H Jeanty
Journal:  Hum Pathol       Date:  1987-04       Impact factor: 3.466

2.  High-resolution image analysis.

Authors:  K Preston
Journal:  J Histochem Cytochem       Date:  1986-01       Impact factor: 2.479

3.  Hybridization of denatured RNA and small DNA fragments transferred to nitrocellulose.

Authors:  P S Thomas
Journal:  Proc Natl Acad Sci U S A       Date:  1980-09       Impact factor: 11.205

4.  Use of synthetic oligonucleotides as hybridization probes: isolation of cloned cDNA sequences for human beta 2-microglobulin.

Authors:  S V Suggs; R B Wallace; T Hirose; E H Kawashima; K Itakura
Journal:  Proc Natl Acad Sci U S A       Date:  1981-11       Impact factor: 11.205

5.  Chromatin texture of melanocytic nuclei: correlation between light and electron microscopy.

Authors:  W Abmayr; W Stolz; S Korherr; W Wild; C Schmoeckel
Journal:  Appl Opt       Date:  1987-08-15       Impact factor: 1.980

6.  Vasopressin mRNA in situ hybridization: localization and regulation studied with oligonucleotide cDNA probes in normal and Brattleboro rat hypothalamus.

Authors:  G R Uhl; H H Zingg; J F Habener
Journal:  Proc Natl Acad Sci U S A       Date:  1985-08       Impact factor: 11.205

7.  Algorithm for a DNA-cytophotometric diagnosis and grading of malignancy.

Authors:  A Böcking; C P Adler; H H Common; M Hilgarth; B Granzen; W Auffermann
Journal:  Anal Quant Cytol       Date:  1984-03

8.  Vasopressin and oxytocin mRNA regulation in the rat assessed by hybridization with synthetic oligonucleotides.

Authors:  J A Majzoub; A Rich; J van Boom; J F Habener
Journal:  J Biol Chem       Date:  1983-12-10       Impact factor: 5.157

9.  Nuclear parameters in the superficial and deep portion of melanocytic lesions--a morphometrical investigation.

Authors:  J Smolle; H P Soyer; F M Juettner; S Hoedl; H Kerl
Journal:  Pathol Res Pract       Date:  1988-06       Impact factor: 3.250

10.  Early detection of precancerous lesions in dysplasias of the lung by rapid DNA image cytometry.

Authors:  W Auffermann; A Böcking
Journal:  Anal Quant Cytol Histol       Date:  1985-09       Impact factor: 0.302

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  2 in total

1.  Expression of transcripts for myelination-related genes in the anterior cingulate cortex in schizophrenia.

Authors:  Robert E McCullumsmith; Daya Gupta; Monica Beneyto; Emily Kreger; Vahram Haroutunian; Kenneth L Davis; James H Meador-Woodruff
Journal:  Schizophr Res       Date:  2007-01-12       Impact factor: 4.939

2.  Quantitative non-radioactive in situ hybridization. Model studies and studies on pituitary proopiomelanocortin cells after adrenalectomy.

Authors:  L I Larsson; B Traasdahl; D M Hougaard
Journal:  Histochemistry       Date:  1991
  2 in total

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