Literature DB >> 28024399

Plasma Protein Binding of Anisomelic Acid: Spectroscopy and Molecular Dynamic Simulations.

Rajendran Senthilkumar1, Parthiban Marimuthu2, Preethy Paul1, Yesaiyan Manojkumar3, Sankaralingam Arunachalam3, John E Eriksson1, Mark S Johnson2.   

Abstract

Anisomelic acid (AA) is a macrocyclic cembranolide compound extracted from Anisomeles herbal species. Recently, we have shown that AA possesses both anticancer and antiviral activity. However, to date, the plasma protein binding properties of AA are unknown. Here, we describe the molecular interactions of AA with two serum proteins, human serum albumin (HSA) and bovine serum albumin (BSA), adopting multiple physicochemical methods. Besides, molecular docking and dynamics simulations were performed to predict the interaction mode and the dynamic behavior of AA with HSA and BSA. The experimental results revealed that hydrophobic forces play a significant part in the interaction of AA to HSA and BSA. The outcomes of the principal components analysis (PCA) of the poses based on root-mean-squared distances showed less variation in AA-HSA, opposed to what is seen for BSA-AA. Furthermore, binding free energies estimated for AA-HSA and AA-BSA complexes at different temperatures (298, 303, 308, and 313 K) based on molecular mechanics-generalized Born surface area (MMGBSA) approaches were well correlated with our experimental results.

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Year:  2016        PMID: 28024399     DOI: 10.1021/acs.jcim.6b00445

Source DB:  PubMed          Journal:  J Chem Inf Model        ISSN: 1549-9596            Impact factor:   4.956


  5 in total

1.  Biomolecular Interaction, Anti-Cancer and Anti-Angiogenic Properties of Cobalt(III) Schiff Base Complexes.

Authors:  Subramanian Ambika; Yesaiyan Manojkumar; Sankaralingam Arunachalam; Balakrishnan Gowdhami; Kishore Kumar Meenakshi Sundaram; Rajadurai Vijay Solomon; Ponnambalam Venuvanalingam; Mohammad Abdulkader Akbarsha; Muthuraman Sundararaman
Journal:  Sci Rep       Date:  2019-02-25       Impact factor: 4.379

2.  Elucidation of the binding mechanism of astragaloside IV derivative with human serum albumin and its cardiotoxicity in zebrafish embryos.

Authors:  You-Jiao Wu; Zhan-Hua Li; Jiu-Yan Li; Yan Zhou; Run-Yue Wang; Xiao-Yi Chen; Lin-Sen Qing; Pei Luo
Journal:  Front Pharmacol       Date:  2022-09-23       Impact factor: 5.988

3.  Predicted Hotspot Residues Involved in Allosteric Signal Transmission in Pro-Apoptotic Peptide-Mcl1 Complexes.

Authors:  Parthiban Marimuthu; Jamoliddin Razzokov; Kalaimathy Singaravelu; Annemie Bogaerts
Journal:  Biomolecules       Date:  2020-07-28

4.  Prediction of Hot Spots at Myeloid Cell Leukemia-1-Inhibitor Interface Using Energy Estimation and Alanine Scanning Mutagenesis.

Authors:  Parthiban Marimuthu; Kalaimathy Singaravelu
Journal:  Biochemistry       Date:  2018-02-01       Impact factor: 3.162

5.  Insight into the Molecular Interaction of Cloxyquin (5-chloro-8-hydroxyquinoline) with Bovine Serum Albumin: Biophysical Analysis and Computational Simulation.

Authors:  Kamonrat Phopin; Waralee Ruankham; Supaluk Prachayasittikul; Virapong Prachayasittikul; Tanawut Tantimongcolwat
Journal:  Int J Mol Sci       Date:  2019-12-30       Impact factor: 5.923

  5 in total

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