Literature DB >> 28012572

Mammalian Polycistronic mRNAs and Disease.

Timofey A Karginov1, Daniel Parviz Hejazi Pastor1, Bert L Semler2, Christopher M Gomez3.   

Abstract

Our understanding of gene expression has come far since the 'one-gene one-polypeptide' hypothesis proposed by Beadle and Tatum. In this review, we address the gradual recognition that a growing number of polycistronic genes, originally discovered in viruses, are being identified within the mammalian genome, and that these may provide new insights into disease mechanisms and treatment. We carried out a systematic literature review identifying 13 mammalian genes for which there is evidence for polycistronic expression via translation through an internal ribosome entry site (IRES). Although the canonical mechanism of translation initiation has been studied extensively, here we highlight a process of noncanonical translation, IRES-mediated translation, that is a growing source for understanding complex inheritance, the elucidation of disease mechanisms, and the discovery of novel therapeutic targets. Identification of additional polycistronic genes may provide new insights into disease therapy and allow for new discoveries of both translational and disease mechanisms.
Copyright © 2016 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  IRES; ITAF; bicistronic; cap-independent; eIF; polycistronic

Mesh:

Substances:

Year:  2016        PMID: 28012572      PMCID: PMC5285393          DOI: 10.1016/j.tig.2016.11.007

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  51 in total

1.  Identification and characterization of a novel cell cycle-regulated internal ribosome entry site.

Authors:  S Cornelis; Y Bruynooghe; G Denecker; S Van Huffel; S Tinton; R Beyaert
Journal:  Mol Cell       Date:  2000-04       Impact factor: 17.970

2.  A reassessment of the translation initiation codon in vertebrates.

Authors:  S Peri; A Pandey
Journal:  Trends Genet       Date:  2001-12       Impact factor: 11.639

3.  Evidence that an IRES within the Notch2 coding region can direct expression of a nuclear form of the protein.

Authors:  A S Lauring; J Overbaugh
Journal:  Mol Cell       Date:  2000-10       Impact factor: 17.970

Review 4.  Repeat associated non-ATG (RAN) translation: new starts in microsatellite expansion disorders.

Authors:  John Douglas Cleary; Laura P W Ranum
Journal:  Curr Opin Genet Dev       Date:  2014-05-22       Impact factor: 5.578

5.  Internal ribosomal entry site (IRES) activity generates endogenous carboxyl-terminal domains of Cx43 and is responsive to hypoxic conditions.

Authors:  Mahboob Ul-Hussain; Stephan Olk; Bodo Schoenebeck; Bianca Wasielewski; Carola Meier; Nora Prochnow; Caroline May; Sara Galozzi; Katrin Marcus; Georg Zoidl; Rolf Dermietzel
Journal:  J Biol Chem       Date:  2014-07-25       Impact factor: 5.157

6.  IRESite--a tool for the examination of viral and cellular internal ribosome entry sites.

Authors:  Martin Mokrejs; Tomás Masek; Václav Vopálensky; Petr Hlubucek; Philippe Delbos; Martin Pospísek
Journal:  Nucleic Acids Res       Date:  2009-11-16       Impact factor: 16.971

Review 7.  Repeat-associated non-ATG (RAN) translation in neurological disease.

Authors:  John D Cleary; Laura P W Ranum
Journal:  Hum Mol Genet       Date:  2013-08-04       Impact factor: 6.150

8.  Internal translation of the connexin 43 transcript.

Authors:  Clàudia Salat-Canela; Marta Sesé; Cristina Peula; Santiago Ramón y Cajal; Trond Aasen
Journal:  Cell Commun Signal       Date:  2014-05-08       Impact factor: 5.712

Review 9.  Cap-Independent Translational Control of Carcinogenesis.

Authors:  Beth Walters; Sunnie R Thompson
Journal:  Front Oncol       Date:  2016-05-25       Impact factor: 6.244

Review 10.  Exploring Internal Ribosome Entry Sites as Therapeutic Targets.

Authors:  Anton A Komar; Maria Hatzoglou
Journal:  Front Oncol       Date:  2015-10-20       Impact factor: 6.244

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  15 in total

1.  α1ACT Is Essential for Survival and Early Cerebellar Programming in a Critical Neonatal Window.

Authors:  Xiaofei Du; Cenfu Wei; Daniel Parviz Hejazi Pastor; Eshaan R Rao; Yan Li; Giorgio Grasselli; Jack Godfrey; Ann C Palmenberg; Jorge Andrade; Christian Hansel; Christopher M Gomez
Journal:  Neuron       Date:  2019-03-25       Impact factor: 17.173

2.  Targeting the CACNA1A IRES as a Treatment for Spinocerebellar Ataxia Type 6.

Authors:  Parviz Daniel Hejazi Pastor; Xiaofei Du; Sarah Fazal; Andre N Davies; Christopher M Gomez
Journal:  Cerebellum       Date:  2018-02       Impact factor: 3.847

3.  Tissue and regional expression patterns of dicistronic tRNA-mRNA transcripts in grapevine (Vitis vinifera) and their evolutionary co-appearance with vasculature in land plants.

Authors:  Carlos M Rodríguez López; Rakesh David; Pastor Jullian Fabres; Lakshay Anand; Na Sai; Stephen Pederson; Fei Zheng; Alexander A Stewart; Benjamin Clements; Edwin R Lampugnani; James Breen; Matthew Gilliham; Penny Tricker
Journal:  Hortic Res       Date:  2021-06-01       Impact factor: 6.793

4.  Efficient Amber Suppression via Ribosomal Skipping for In Situ Synthesis of Photoconditional Nanobodies.

Authors:  Eike F Joest; Christian Winter; Joshua S Wesalo; Alexander Deiters; Robert Tampé
Journal:  ACS Synth Biol       Date:  2022-01-21       Impact factor: 5.249

Review 5.  Insights into Structural and Mechanistic Features of Viral IRES Elements.

Authors:  Encarnacion Martinez-Salas; Rosario Francisco-Velilla; Javier Fernandez-Chamorro; Azman M Embarek
Journal:  Front Microbiol       Date:  2018-01-04       Impact factor: 5.640

6.  Altered translation initiation of Gja1 limits gap junction formation during epithelial-mesenchymal transition.

Authors:  Carissa C James; Michael J Zeitz; Patrick J Calhoun; Samy Lamouille; James W Smyth
Journal:  Mol Biol Cell       Date:  2018-04-01       Impact factor: 4.138

Review 7.  Recognition of the polycistronic nature of human genes is critical to understanding the genotype-phenotype relationship.

Authors:  Marie A Brunet; Sébastien A Levesque; Darel J Hunting; Alan A Cohen; Xavier Roucou
Journal:  Genome Res       Date:  2018-04-06       Impact factor: 9.043

8.  Analysis of the relationship between coexpression domains and chromatin 3D organization.

Authors:  María E Soler-Oliva; José A Guerrero-Martínez; Valentina Bachetti; José C Reyes
Journal:  PLoS Comput Biol       Date:  2017-09-13       Impact factor: 4.475

Review 9.  Effects of Oxidative Stress on Protein Translation: Implications for Cardiovascular Diseases.

Authors:  Arnab Ghosh; Natalia Shcherbik
Journal:  Int J Mol Sci       Date:  2020-04-11       Impact factor: 5.923

Review 10.  Deconstructing internal ribosome entry site elements: an update of structural motifs and functional divergences.

Authors:  Gloria Lozano; Rosario Francisco-Velilla; Encarnacion Martinez-Salas
Journal:  Open Biol       Date:  2018-11-28       Impact factor: 6.411

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