Literature DB >> 28009541

X-ray radiation damage to biological macromolecules: further insights.

Elspeth F Garman1, Martin Weik2.   

Abstract

Despite significant progress made over more than 15 years of research, structural biologists are still grappling with the issue of radiation damage suffered by macromolecular crystals which is induced by the resultant radiation chemistry occurring during X-ray diffraction experiments. Further insights into these effects and the possible mitigation strategies for use in both diffraction and SAXS experiments are given in eight papers in this volume. In particular, damage during experimental phasing is addressed, scavengers for SAXS experiments are investigated, microcrystals are imaged, data collection strategies are optimized, specific damage to tyrosine residues is reexamined, and room temperature conformational heterogeneity as a function of dose is explored. The brief summary below puts these papers into perspective relative to other ongoing radiation damage research on macromolecules.

Entities:  

Keywords:  SAXS; X-ray radiation damage; dose; imaging; macromolecular crystallography; scavengers

Mesh:

Substances:

Year:  2017        PMID: 28009541     DOI: 10.1107/S160057751602018X

Source DB:  PubMed          Journal:  J Synchrotron Radiat        ISSN: 0909-0495            Impact factor:   2.616


  15 in total

Review 1.  Predicting data quality in biological X-ray solution scattering.

Authors:  Chenzheng Wang; Yuexia Lin; Devin Bougie; Richard E Gillilan
Journal:  Acta Crystallogr D Struct Biol       Date:  2018-07-24       Impact factor: 7.652

2.  Evaluating the impact of X-ray damage on conformational heterogeneity in room-temperature (277 K) and cryo-cooled protein crystals.

Authors:  Filip Yabukarski; Tzanko Doukov; Daniel A Mokhtari; Siyuan Du; Daniel Herschlag
Journal:  Acta Crystallogr D Struct Biol       Date:  2022-07-14       Impact factor: 5.699

3.  Instrumentation and experimental procedures for robust collection of X-ray diffraction data from protein crystals across physiological temperatures.

Authors:  Tzanko Doukov; Daniel Herschlag; Filip Yabukarski
Journal:  J Appl Crystallogr       Date:  2020-11-05       Impact factor: 3.304

Review 4.  Macromolecular movies, storybooks written by nature.

Authors:  Marius Schmidt
Journal:  Biophys Rev       Date:  2021-11-03

5.  Identification of the point of diminishing returns in high-multiplicity data collection for sulfur SAD phasing.

Authors:  Selina L S Storm; Fabio Dall'Antonia; Gleb Bourenkov; Thomas R Schneider
Journal:  J Synchrotron Radiat       Date:  2017-01-01       Impact factor: 2.616

6.  X-ray dynamical diffraction in amino acid crystals: a step towards improving structural resolution of biological molecules via physical phase measurements.

Authors:  Sérgio L Morelhão; Cláudio M R Remédios; Guilherme A Calligaris; Gareth Nisbet
Journal:  J Appl Crystallogr       Date:  2017-05-08       Impact factor: 3.304

7.  XUV double-pulses with femtosecond to 650 ps separation from a multilayer-mirror-based split-and-delay unit at FLASH.

Authors:  Mario Sauppe; Dimitrios Rompotis; Benjamin Erk; Sadia Bari; Tobias Bischoff; Rebecca Boll; Cédric Bomme; Christoph Bostedt; Simon Dörner; Stefan Düsterer; Torsten Feigl; Leonie Flückiger; Tais Gorkhover; Katharina Kolatzki; Bruno Langbehn; Nils Monserud; Erland Müller; Jan P Müller; Christopher Passow; Daniel Ramm; Daniel Rolles; Kaja Schubert; Lucas Schwob; Björn Senfftleben; Rolf Treusch; Anatoli Ulmer; Holger Weigelt; Jannis Zimbalski; Julian Zimmermann; Thomas Möller; Daniela Rupp
Journal:  J Synchrotron Radiat       Date:  2018-08-03       Impact factor: 2.616

8.  Megahertz non-contact luminescence decay time cryothermometry by means of ultrafast PbI2 scintillator.

Authors:  V B Mykhaylyk; H Kraus; L Bobb; R Gamernyk; K Koronski
Journal:  Sci Rep       Date:  2019-03-27       Impact factor: 4.379

9.  Synchrotron microcrystal native-SAD phasing at a low energy.

Authors:  Gongrui Guo; Ping Zhu; Martin R Fuchs; Wuxian Shi; Babak Andi; Yuan Gao; Wayne A Hendrickson; Sean McSweeney; Qun Liu
Journal:  IUCrJ       Date:  2019-05-03       Impact factor: 4.769

10.  Simulated sample heating from a nanofocused X-ray beam.

Authors:  Harald Wallander; Jesper Wallentin
Journal:  J Synchrotron Radiat       Date:  2017-08-02       Impact factor: 2.616

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