Literature DB >> 28008720

The exon junction complex: a lifelong guardian of mRNA fate.

Lauren A Woodward1, Justin W Mabin1, Pooja Gangras1, Guramrit Singh1.   

Abstract

During messenger RNA (mRNA) biogenesis and processing in the nucleus, many proteins are imprinted on mRNAs assembling them into messenger ribonucleoproteins (mRNPs). Some of these proteins remain stably bound within mRNPs and have a long-lasting impact on their fate. One of the best-studied examples is the exon junction complex (EJC), a multiprotein complex deposited primarily 24 nucleotides upstream of exon-exon junctions as a consequence of pre-mRNA splicing. The EJC maintains a stable, sequence-independent, hold on the mRNA until its removal during translation in the cytoplasm. Acting as a molecular shepherd, the EJC travels with mRNA across the cellular landscape coupling pre-mRNA splicing to downstream, posttranscriptional processes such as mRNA export, mRNA localization, translation, and nonsense-mediated mRNA decay (NMD). In this review, we discuss our current understanding of the EJC's functions during these processes, and expound its newly discovered functions (e.g., pre-mRNA splicing). Another focal point is the recently unveiled in vivo EJC interactome, which has shed new light on the EJC's location on the spliced RNAs and its intimate relationship with other mRNP components. We summarize new strides being made in connecting the EJC's molecular function with phenotypes, informed by studies of human disorders and model organisms. The progress toward understanding EJC functions has revealed, in its wake, even more questions, which are discussed throughout. WIREs RNA 2017, 8:e1411. doi: 10.1002/wrna.1411 For further resources related to this article, please visit the WIREs website.
© 2016 Wiley Periodicals, Inc.

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Year:  2016        PMID: 28008720     DOI: 10.1002/wrna.1411

Source DB:  PubMed          Journal:  Wiley Interdiscip Rev RNA        ISSN: 1757-7004            Impact factor:   9.957


  29 in total

Review 1.  Nonsense-mediated mRNA decay: The challenge of telling right from wrong in a complex transcriptome.

Authors:  Aparna Kishor; Sarah E Fritz; J Robert Hogg
Journal:  Wiley Interdiscip Rev RNA       Date:  2019-05-26       Impact factor: 9.957

2.  The Exon Junction Complex Undergoes a Compositional Switch that Alters mRNP Structure and Nonsense-Mediated mRNA Decay Activity.

Authors:  Justin W Mabin; Lauren A Woodward; Robert D Patton; Zhongxia Yi; Mengxuan Jia; Vicki H Wysocki; Ralf Bundschuh; Guramrit Singh
Journal:  Cell Rep       Date:  2018-11-19       Impact factor: 9.423

Review 3.  The Interplay between the RNA Decay and Translation Machinery in Eukaryotes.

Authors:  Adam M Heck; Jeffrey Wilusz
Journal:  Cold Spring Harb Perspect Biol       Date:  2018-05-01       Impact factor: 10.005

4.  RIPiT-Seq: A tandem immunoprecipitation approach to reveal global binding landscape of multisubunit ribonucleoproteins.

Authors:  Zhongxia Yi; Guramrit Singh
Journal:  Methods Enzymol       Date:  2021-05-18       Impact factor: 1.600

Review 5.  The Branched Nature of the Nonsense-Mediated mRNA Decay Pathway.

Authors:  Zhongxia Yi; Manu Sanjeev; Guramrit Singh
Journal:  Trends Genet       Date:  2020-09-29       Impact factor: 11.639

Review 6.  Translation initiation mediated by nuclear cap-binding protein complex.

Authors:  Incheol Ryu; Yoon Ki Kim
Journal:  BMB Rep       Date:  2017-04       Impact factor: 4.778

7.  The role of the NMD factor UPF3B in olfactory sensory neurons.

Authors:  Kun Tan; Samantha H Jones; Blue B Lake; Jennifer N Chousal; Eleen Y Shum; Lingjuan Zhang; Song Chen; Abhishek Sohni; Shivam Pandya; Richard L Gallo; Kun Zhang; Heidi Cook-Andersen; Miles F Wilkinson
Journal:  Elife       Date:  2020-08-10       Impact factor: 8.713

Review 8.  Nuclear speckles: molecular organization, biological function and role in disease.

Authors:  Lukasz Galganski; Martyna O Urbanek; Wlodzimierz J Krzyzosiak
Journal:  Nucleic Acids Res       Date:  2017-10-13       Impact factor: 16.971

Review 9.  mRNA export in the apicomplexan parasite Toxoplasma gondii: emerging divergent components of a crucial pathway.

Authors:  Andréa Rodrigues Ávila; Alexjandro Cabezas-Cruz; Mathieu Gissot
Journal:  Parasit Vectors       Date:  2018-01-25       Impact factor: 3.876

Review 10.  RNA biology of disease-associated microsatellite repeat expansions.

Authors:  Kushal J Rohilla; Keith T Gagnon
Journal:  Acta Neuropathol Commun       Date:  2017-08-29       Impact factor: 7.801

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