Literature DB >> 28005371

M3C: A Computational Approach To Describe Statistical Fragmentation of Excited Molecules and Clusters.

Néstor F Aguirre1, Sergio Díaz-Tendero1,2, Paul-Antoine Hervieux3, Manuel Alcamí1,4, Fernando Martín1,2,4.   

Abstract

The Microcanonical Metropolis Monte Carlo method, based on a random sampling of the density of states, is revisited for the study of molecular fragmentation in the gas phase (isolated molecules, atomic and molecular clusters, complex biomolecules, etc.). A random walk or uniform random sampling in the configurational space (atomic positions) and a uniform random sampling of the relative orientation, vibrational energy, and chemical composition of the fragments is used to estimate the density of states of the system, which is continuously updated as the random sampling populates individual states. The validity and usefulness of the method is demonstrated by applying it to evaluate the caloric curve of a weakly bound rare gas cluster (Ar13), to interpret the fragmentation of highly excited small neutral and singly positively charged carbon clusters (Cn, n = 5,7,9 and Cn+, n = 4,5) and to simulate the mass spectrum of the acetylene molecule (C2H2).

Entities:  

Year:  2017        PMID: 28005371     DOI: 10.1021/acs.jctc.6b00984

Source DB:  PubMed          Journal:  J Chem Theory Comput        ISSN: 1549-9618            Impact factor:   6.006


  2 in total

1.  Dissociation dynamics of the diamondoid adamantane upon photoionization by XUV femtosecond pulses.

Authors:  Sylvain Maclot; Jan Lahl; Jasper Peschel; Hampus Wikmark; Piotr Rudawski; Fabian Brunner; Hélène Coudert-Alteirac; Suvasthika Indrajith; Bernd A Huber; Sergio Díaz-Tendero; Néstor F Aguirre; Patrick Rousseau; Per Johnsson
Journal:  Sci Rep       Date:  2020-02-19       Impact factor: 4.379

Review 2.  Software Tools and Approaches for Compound Identification of LC-MS/MS Data in Metabolomics.

Authors:  Ivana Blaženović; Tobias Kind; Jian Ji; Oliver Fiehn
Journal:  Metabolites       Date:  2018-05-10
  2 in total

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