Literature DB >> 28003446

Transcriptional regulation of a horizontally transferred gene from bacterium to chordate.

Yasunori Sasakura1, Yosuke Ogura2, Nicholas Treen2, Rui Yokomori3, Sung-Joon Park3, Kenta Nakai3, Hidetoshi Saiga4, Tetsushi Sakuma5, Takashi Yamamoto5, Shigeki Fujiwara6, Keita Yoshida2.   

Abstract

The horizontal transfer of genes between distantly related organisms is undoubtedly a major factor in the evolution of novel traits. Because genes are functionless without expression, horizontally transferred genes must acquire appropriate transcriptional regulations in their recipient organisms, although the evolutionary mechanism is not known well. The defining characteristic of tunicates is the presence of a cellulose containing tunic covering the adult and larval body surface. Cellulose synthase was acquired by horizontal gene transfer from Actinobacteria. We found that acquisition of the binding site of AP-2 transcription factor was essential for tunicate cellulose synthase to gain epidermal-specific expression. Actinobacteria have very GC-rich genomes, regions of which are capable of inducing specific expression in the tunicate epidermis as the AP-2 binds to a GC-rich region. Therefore, the actinobacterial cellulose synthase could have been potentiated to evolve its new function in the ancestor of tunicates with a higher probability than the evolution depending solely on a spontaneous event.
© 2016 The Author(s).

Entities:  

Keywords:  AP-2; Ciona intestinalis; cellulose; horizontal gene transfer; tunicate

Mesh:

Substances:

Year:  2016        PMID: 28003446      PMCID: PMC5204163          DOI: 10.1098/rspb.2016.1712

Source DB:  PubMed          Journal:  Proc Biol Sci        ISSN: 0962-8452            Impact factor:   5.349


  32 in total

1.  Gene expression profiles of transcription factors and signaling molecules in the ascidian embryo: towards a comprehensive understanding of gene networks.

Authors:  Kaoru S Imai; Kyosuke Hino; Kasumi Yagi; Nori Satoh; Yutaka Satou
Journal:  Development       Date:  2004-07-21       Impact factor: 6.868

2.  A combinatorial code of maternal GATA, Ets and beta-catenin-TCF transcription factors specifies and patterns the early ascidian ectoderm.

Authors:  Ute Rothbächer; Vincent Bertrand; Clement Lamy; Patrick Lemaire
Journal:  Development       Date:  2007-11       Impact factor: 6.868

3.  Lateral transfer of genes from fungi underlies carotenoid production in aphids.

Authors:  Nancy A Moran; Tyler Jarvik
Journal:  Science       Date:  2010-04-30       Impact factor: 47.728

Review 4.  Horizontal gene transfer in the acquisition of novel traits by metazoans.

Authors:  Luis Boto
Journal:  Proc Biol Sci       Date:  2014-01-08       Impact factor: 5.349

5.  Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2).

Authors:  S D Bentley; K F Chater; A-M Cerdeño-Tárraga; G L Challis; N R Thomson; K D James; D E Harris; M A Quail; H Kieser; D Harper; A Bateman; S Brown; G Chandra; C W Chen; M Collins; A Cronin; A Fraser; A Goble; J Hidalgo; T Hornsby; S Howarth; C-H Huang; T Kieser; L Larke; L Murphy; K Oliver; S O'Neil; E Rabbinowitsch; M-A Rajandream; K Rutherford; S Rutter; K Seeger; D Saunders; S Sharp; R Squares; S Squares; K Taylor; T Warren; A Wietzorrek; J Woodward; B G Barrell; J Parkhill; D A Hopwood
Journal:  Nature       Date:  2002-05-09       Impact factor: 49.962

6.  The evolutionary origin of animal cellulose synthase.

Authors:  Keisuke Nakashima; Lixy Yamada; Yutaka Satou; Jun-Ichi Azuma; Nori Satoh
Journal:  Dev Genes Evol       Date:  2004-01-22       Impact factor: 0.900

7.  Efficient design and assembly of custom TALEN and other TAL effector-based constructs for DNA targeting.

Authors:  Tomas Cermak; Erin L Doyle; Michelle Christian; Li Wang; Yong Zhang; Clarice Schmidt; Joshua A Baller; Nikunj V Somia; Adam J Bogdanove; Daniel F Voytas
Journal:  Nucleic Acids Res       Date:  2011-04-14       Impact factor: 16.971

8.  Variation, evolution, and correlation analysis of C+G content and genome or chromosome size in different kingdoms and phyla.

Authors:  Xiu-Qing Li; Donglei Du
Journal:  PLoS One       Date:  2014-02-13       Impact factor: 3.240

9.  Repeating pattern of non-RVD variations in DNA-binding modules enhances TALEN activity.

Authors:  Tetsushi Sakuma; Hiroshi Ochiai; Takehito Kaneko; Tomoji Mashimo; Daisuke Tokumasu; Yuto Sakane; Ken-ichi Suzuki; Tatsuo Miyamoto; Naoaki Sakamoto; Shinya Matsuura; Takashi Yamamoto
Journal:  Sci Rep       Date:  2013-11-29       Impact factor: 4.379

10.  CRISPR/Cas9-mediated gene knockout in the ascidian Ciona intestinalis.

Authors:  Haruka Sasaki; Keita Yoshida; Akiko Hozumi; Yasunori Sasakura
Journal:  Dev Growth Differ       Date:  2014-09-12       Impact factor: 2.053

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  4 in total

Review 1.  Functional horizontal gene transfer from bacteria to eukaryotes.

Authors:  Filip Husnik; John P McCutcheon
Journal:  Nat Rev Microbiol       Date:  2017-11-27       Impact factor: 60.633

2.  Phylogenetic Analyses of Glycosyl Hydrolase Family 6 Genes in Tunicates: Possible Horizontal Transfer.

Authors:  Kun-Lung Li; Keisuke Nakashima; Jun Inoue; Noriyuki Satoh
Journal:  Genes (Basel)       Date:  2020-08-13       Impact factor: 4.096

3.  Features of a novel protein, rusticalin, from the ascidian Styela rustica reveal ancestral horizontal gene transfer event.

Authors:  Maria A Daugavet; Sergey Shabelnikov; Alexander Shumeev; Tatiana Shaposhnikova; Leonid S Adonin; Olga Podgornaya
Journal:  Mob DNA       Date:  2019-01-19

4.  The Genome of the "Sea Vomit" Didemnum vexillum.

Authors:  Ernesto Parra-Rincón; Cristian A Velandia-Huerto; Adriaan Gittenberger; Jörg Fallmann; Thomas Gatter; Federico D Brown; Peter F Stadler; Clara I Bermúdez-Santana
Journal:  Life (Basel)       Date:  2021-12-10
  4 in total

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