Literature DB >> 28003147

Developing the Quantitative Histopathology Image Ontology (QHIO): A case study using the hot spot detection problem.

Metin N Gurcan1, John Tomaszewski2, James A Overton3, Scott Doyle2, Alan Ruttenberg4, Barry Smith5.   

Abstract

Interoperability across data sets is a key challenge for quantitative histopathological imaging. There is a need for an ontology that can support effective merging of pathological image data with associated clinical and demographic data. To foster organized, cross-disciplinary, information-driven collaborations in the pathological imaging field, we propose to develop an ontology to represent imaging data and methods used in pathological imaging and analysis, and call it Quantitative Histopathological Imaging Ontology - QHIO. We apply QHIO to breast cancer hot-spot detection with the goal of enhancing reliability of detection by promoting the sharing of data between image analysts. Copyright Â
© 2016 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Breast cancer; Histopathology imaging; Hot spot; Image analysis; Ontology

Mesh:

Year:  2016        PMID: 28003147      PMCID: PMC5316345          DOI: 10.1016/j.jbi.2016.12.006

Source DB:  PubMed          Journal:  J Biomed Inform        ISSN: 1532-0464            Impact factor:   6.317


  15 in total

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2.  An Image Analysis Resource for Cancer Research: PIIP-Pathology Image Informatics Platform for Visualization, Analysis, and Management.

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7.  Annotations, Ontologies, and Whole Slide Images - Development of an Annotated Ontology-Driven Whole Slide Image Library of Normal and Abnormal Human Tissue.

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