Literature DB >> 28000974

Amino Acid-Specific, Ribonucleotide-Promoted Peptide Formation in the Absence of Enzymes.

Helmut Griesser1, Maren Bechthold1, Peter Tremmel1, Eric Kervio1, Clemens Richert1.   

Abstract

Nucleic acids and polypeptides are at the heart of life. It is interesting to ask whether the monomers of these biopolymers possess intrinsic reactivity that favors oligomerization in the absence of enzymes. We have recently observed that covalently linked peptido RNA chains form when mixtures of monomers react in salt-rich condensation buffer. Here, we report the results of a screen of the 20 proteinogenic amino acids and four ribonucleotides. None of the amino acids prevent phosphodiester formation, so all of them are compatible with genetic encoding through RNA chain growth. A reactivity landscape was found, in which peptide formation strongly depends on the structure of the amino acid, but less on the nucleobase. For example, proline gives ribonucleotide-bound peptides most readily, tyrosine favors pyrophosphate and phosphodiester formation, and histidine gives phosphorimidazolides as dominant products. When proline and aspartic acid were allowed to compete for incorporation, only proline was found at the N-terminus of peptido chains. The reactivity described here links two fundamental classes of biomolecules through reactions that occur without enzymes, but with amino acid specificity.
© 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  RNA; amino acids; nucleotides; peptides; prebiotic chemistry

Mesh:

Substances:

Year:  2016        PMID: 28000974     DOI: 10.1002/anie.201610651

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  14 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  2021-03-02       Impact factor: 11.205

2.  Templates direct the sequence-specific anchoring of the C-terminus of peptido RNAs.

Authors:  Biswarup Jash; Clemens Richert
Journal:  Chem Sci       Date:  2020-03-02       Impact factor: 9.825

Review 3.  Nitrogenous Derivatives of Phosphorus and the Origins of Life: Plausible Prebiotic Phosphorylating Agents in Water.

Authors:  Megha Karki; Clémentine Gibard; Subhendu Bhowmik; Ramanarayanan Krishnamurthy
Journal:  Life (Basel)       Date:  2017-07-29

Review 4.  Enzyme-free genetic copying of DNA and RNA sequences.

Authors:  Marilyne Sosson; Clemens Richert
Journal:  Beilstein J Org Chem       Date:  2018-03-12       Impact factor: 2.883

5.  Acetyl Phosphate as a Primordial Energy Currency at the Origin of Life.

Authors:  Alexandra Whicher; Eloi Camprubi; Silvana Pinna; Barry Herschy; Nick Lane
Journal:  Orig Life Evol Biosph       Date:  2018-03-03       Impact factor: 1.950

6.  The Chemical Likelihood of Ribonucleotide-α-Amino acid Copolymers as Players for Early Stages of Evolution.

Authors:  Ziwei Liu; Ghinwa Ajram; Jean-Christophe Rossi; Robert Pascal
Journal:  J Mol Evol       Date:  2019-02-20       Impact factor: 2.395

7.  Enzyme-free ligation of dimers and trimers to RNA primers.

Authors:  Marilyne Sosson; Daniel Pfeffer; Clemens Richert
Journal:  Nucleic Acids Res       Date:  2019-05-07       Impact factor: 16.971

8.  Selective incorporation of proteinaceous over nonproteinaceous cationic amino acids in model prebiotic oligomerization reactions.

Authors:  Moran Frenkel-Pinter; Jay W Haynes; Martin C; Anton S Petrov; Bradley T Burcar; Ramanarayanan Krishnamurthy; Nicholas V Hud; Luke J Leman; Loren Dean Williams
Journal:  Proc Natl Acad Sci U S A       Date:  2019-07-29       Impact factor: 11.205

9.  Regioselective formation of RNA strands in the absence of magnesium ions.

Authors:  Sebastian Motsch; Peter Tremmel; Clemens Richert
Journal:  Nucleic Acids Res       Date:  2020-02-20       Impact factor: 16.971

Review 10.  How Small Heterocycles Make a Reaction Network of Amino Acids and Nucleotides Efficient in Water.

Authors:  Peter Tremmel; Helmut Griesser; Ulrich E Steiner; Clemens Richert
Journal:  Angew Chem Int Ed Engl       Date:  2019-08-09       Impact factor: 15.336

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