Literature DB >> 27992416

Genome-wide association analyses of sleep disturbance traits identify new loci and highlight shared genetics with neuropsychiatric and metabolic traits.

Jacqueline M Lane1,2,3, Jingjing Liang4, Irma Vlasac1,3, Simon G Anderson5,6, David A Bechtold7, Jack Bowden8,9, Richard Emsley10, Shubhroz Gill3, Max A Little11,12, Annemarie I Luik13, Andrew Loudon7, Frank A J L Scheer14, Shaun M Purcell3,15,16, Simon D Kyle13, Deborah A Lawlor8,9, Xiaofeng Zhu4, Susan Redline17, David W Ray7, Martin K Rutter7,18, Richa Saxena1,2,3,14.   

Abstract

Chronic sleep disturbances, associated with cardiometabolic diseases, psychiatric disorders and all-cause mortality, affect 25-30% of adults worldwide. Although environmental factors contribute substantially to self-reported habitual sleep duration and disruption, these traits are heritable and identification of the genes involved should improve understanding of sleep, mechanisms linking sleep to disease and development of new therapies. We report single- and multiple-trait genome-wide association analyses of self-reported sleep duration, insomnia symptoms and excessive daytime sleepiness in the UK Biobank (n = 112,586). We discover loci associated with insomnia symptoms (near MEIS1, TMEM132E, CYCL1 and TGFBI in females and WDR27 in males), excessive daytime sleepiness (near AR-OPHN1) and a composite sleep trait (near PATJ (INADL) and HCRTR2) and replicate a locus associated with sleep duration (at PAX8). We also observe genetic correlation between longer sleep duration and schizophrenia risk (rg = 0.29, P = 1.90 × 10-13) and between increased levels of excessive daytime sleepiness and increased measures for adiposity traits (body mass index (BMI): rg = 0.20, P = 3.12 × 10-9; waist circumference: rg = 0.20, P = 2.12 × 10-7).

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Year:  2016        PMID: 27992416      PMCID: PMC5491693          DOI: 10.1038/ng.3749

Source DB:  PubMed          Journal:  Nat Genet        ISSN: 1061-4036            Impact factor:   38.330


  93 in total

1.  Translational profiling of hypocretin neurons identifies candidate molecules for sleep regulation.

Authors:  Jasbir Dalal; Jee Hoon Roh; Susan E Maloney; Afua Akuffo; Samir Shah; Han Yuan; Brie Wamsley; Wendell B Jones; Cristina de Guzman Strong; Paul A Gray; David M Holtzman; Nathaniel Heintz; Joseph D Dougherty
Journal:  Genes Dev       Date:  2013-02-21       Impact factor: 11.361

Review 2.  Metabolic effects of sleep disruption, links to obesity and diabetes.

Authors:  Arlet V Nedeltcheva; Frank A J L Scheer
Journal:  Curr Opin Endocrinol Diabetes Obes       Date:  2014-08       Impact factor: 3.243

3.  Hematopoietic, angiogenic and eye defects in Meis1 mutant animals.

Authors:  Tomoyuki Hisa; Sally E Spence; Rivka A Rachel; Masami Fujita; Takuro Nakamura; Jerrold M Ward; Deborah E Devor-Henneman; Yuriko Saiki; Haruo Kutsuna; Lino Tessarollo; Nancy A Jenkins; Neal G Copeland
Journal:  EMBO J       Date:  2004-01-08       Impact factor: 11.598

4.  Obesity without sleep apnea is associated with daytime sleepiness.

Authors:  A N Vgontzas; E O Bixler; T L Tan; D Kantner; L F Martin; A Kales
Journal:  Arch Intern Med       Date:  1998-06-22

5.  Slow wave sleep in humans: role of 5-HT2A and 5-HT2C receptors.

Authors:  A L Sharpley; J M Elliott; M J Attenburrow; P J Cowen
Journal:  Neuropharmacology       Date:  1994 Mar-Apr       Impact factor: 5.250

6.  Sleep and circadian rhythm disruption in schizophrenia.

Authors:  Katharina Wulff; Derk-Jan Dijk; Benita Middleton; Russell G Foster; Eileen M Joyce
Journal:  Br J Psychiatry       Date:  2011-12-22       Impact factor: 9.319

7.  Fast and accurate long-range phasing in a UK Biobank cohort.

Authors:  Po-Ru Loh; Pier Francesco Palamara; Alkes L Price
Journal:  Nat Genet       Date:  2016-06-06       Impact factor: 38.330

8.  Haplotype estimation for biobank-scale data sets.

Authors:  Jared O'Connell; Kevin Sharp; Nick Shrine; Louise Wain; Ian Hall; Martin Tobin; Jean-Francois Zagury; Olivier Delaneau; Jonathan Marchini
Journal:  Nat Genet       Date:  2016-06-06       Impact factor: 38.330

9.  Replication and meta-analysis of TMEM132D gene variants in panic disorder.

Authors:  A Erhardt; N Akula; J Schumacher; D Czamara; N Karbalai; B Müller-Myhsok; O Mors; A Borglum; A S Kristensen; D P D Woldbye; P Koefoed; E Eriksson; E Maron; A Metspalu; J Nurnberger; R A Philibert; J Kennedy; K Domschke; A Reif; J Deckert; T Otowa; Y Kawamura; H Kaiya; Y Okazaki; H Tanii; K Tokunaga; T Sasaki; J P A Ioannidis; F J McMahon; E B Binder
Journal:  Transl Psychiatry       Date:  2012-09-04       Impact factor: 6.222

10.  WEB-based GEne SeT AnaLysis Toolkit (WebGestalt): update 2013.

Authors:  Jing Wang; Dexter Duncan; Zhiao Shi; Bing Zhang
Journal:  Nucleic Acids Res       Date:  2013-05-23       Impact factor: 16.971

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  106 in total

1.  Shared Genetic Control of Brain Activity During Sleep and Insulin Secretion: A Laboratory-Based Family Study.

Authors:  Lisa L Morselli; Eric R Gamazon; Esra Tasali; Nancy J Cox; Eve Van Cauter; Lea K Davis
Journal:  Diabetes       Date:  2017-10-30       Impact factor: 9.461

2.  Direct activation of G-protein-gated inward rectifying K+ channels promotes nonrapid eye movement sleep.

Authors:  Bende Zou; William S Cao; Zhiwei Guan; Kui Xiao; Conrado Pascual; Julian Xie; Jingxi Zhang; James Xie; Frank Kayser; Craig W Lindsley; C David Weaver; Jidong Fang; Xinmin Simon Xie
Journal:  Sleep       Date:  2019-03-01       Impact factor: 5.849

Review 3.  The impact of stress on sleep: Pathogenic sleep reactivity as a vulnerability to insomnia and circadian disorders.

Authors:  David A Kalmbach; Jason R Anderson; Christopher L Drake
Journal:  J Sleep Res       Date:  2018-05-24       Impact factor: 3.981

Review 4.  Co-shared genetics and possible risk gene pathway partially explain the comorbidity of schizophrenia, major depressive disorder, type 2 diabetes, and metabolic syndrome.

Authors:  Teodor T Postolache; Laura Del Bosque-Plata; Serge Jabbour; Michael Vergare; Rongling Wu; Claudia Gragnoli
Journal:  Am J Med Genet B Neuropsychiatr Genet       Date:  2019-02-06       Impact factor: 3.568

5.  Kleine-Levin syndrome is associated with birth difficulties and genetic variants in the TRANK1 gene loci.

Authors:  Aditya Ambati; Ryan Hillary; Smaranda Leu-Semenescu; Hanna M Ollila; Ling Lin; Emmanuel H During; Neal Farber; Thomas J Rico; Juliette Faraco; Eileen Leary; Andrea N Goldstein-Piekarski; Yu-Shu Huang; Fang Han; Yakov Sivan; Michel Lecendreux; Pauline Dodet; Makoto Honda; Natan Gadoth; Sona Nevsimalova; Fabio Pizza; Takashi Kanbayashi; Rosa Peraita-Adrados; Guy D Leschziner; Rosa Hasan; Francesca Canellas; Kazuhiko Kume; Makrina Daniilidou; Patrice Bourgin; David Rye; José L Vicario; Birgit Hogl; Seung Chul Hong; Guiseppe Plazzi; Geert Mayer; Anne Marie Landtblom; Yves Dauvilliers; Isabelle Arnulf; Emmanuel Jean-Marie Mignot
Journal:  Proc Natl Acad Sci U S A       Date:  2021-03-23       Impact factor: 11.205

6.  Estimating SNP-Based Heritability and Genetic Correlation in Case-Control Studies Directly and with Summary Statistics.

Authors:  Omer Weissbrod; Jonathan Flint; Saharon Rosset
Journal:  Am J Hum Genet       Date:  2018-07-05       Impact factor: 11.025

7.  A Large Multiethnic Genome-Wide Association Study of Adult Body Mass Index Identifies Novel Loci.

Authors:  Thomas J Hoffmann; Hélène Choquet; Jie Yin; Yambazi Banda; Mark N Kvale; Maria Glymour; Catherine Schaefer; Neil Risch; Eric Jorgenson
Journal:  Genetics       Date:  2018-08-14       Impact factor: 4.562

8.  Phenotypic Landscape of Schizophrenia-Associated Genes Defines Candidates and Their Shared Functions.

Authors:  Summer B Thyme; Lindsey M Pieper; Eric H Li; Shristi Pandey; Yiqun Wang; Nathan S Morris; Carrie Sha; Joo Won Choi; Kristian J Herrera; Edward R Soucy; Steve Zimmerman; Owen Randlett; Joel Greenwood; Steven A McCarroll; Alexander F Schier
Journal:  Cell       Date:  2019-03-28       Impact factor: 41.582

9.  Adjustment for covariates using summary statistics of genome-wide association studies.

Authors:  Tao Wang; Xiaonan Xue; Xianhong Xie; Kenny Ye; Xiaofeng Zhu; Robert C Elston
Journal:  Genet Epidemiol       Date:  2018-09-20       Impact factor: 2.135

Review 10.  The genetics of obstructive sleep apnoea.

Authors:  Sutapa Mukherjee; Richa Saxena; Lyle J Palmer
Journal:  Respirology       Date:  2017-11-07       Impact factor: 6.424

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