Literature DB >> 27991677

A longitudinal four-dimensional computed tomography and cone beam computed tomography dataset for image-guided radiation therapy research in lung cancer.

Geoffrey D Hugo1, Elisabeth Weiss1, William C Sleeman1, Salim Balik2, Paul J Keall3, Jun Lu4, Jeffrey F Williamson1.   

Abstract

PURPOSE: To describe in detail a dataset consisting of serial four-dimensional computed tomography (4DCT) and 4D cone beam CT (4DCBCT) images acquired during chemoradiotherapy of 20 locally advanced, nonsmall cell lung cancer patients we have collected at our institution and shared publicly with the research community. ACQUISITION AND VALIDATION
METHODS: As part of an NCI-sponsored research study 82 4DCT and 507 4DCBCT images were acquired in a population of 20 locally advanced nonsmall cell lung cancer patients undergoing radiation therapy. All subjects underwent concurrent radiochemotherapy to a total dose of 59.4-70.2 Gy using daily 1.8 or 2 Gy fractions. Audio-visual biofeedback was used to minimize breathing irregularity during all fractions, including acquisition of all 4DCT and 4DCBCT acquisitions in all subjects. Target, organs at risk, and implanted fiducial markers were delineated by a physician in the 4DCT images. Image coordinate system origins between 4DCT and 4DCBCT were manipulated in such a way that the images can be used to simulate initial patient setup in the treatment position. 4DCT images were acquired on a 16-slice helical CT simulator with 10 breathing phases and 3 mm slice thickness during simulation. In 13 of the 20 subjects, 4DCTs were also acquired on the same scanner weekly during therapy. Every day, 4DCBCT images were acquired on a commercial onboard CBCT scanner. An optically tracked external surrogate was synchronized with CBCT acquisition so that each CBCT projection was time stamped with the surrogate respiratory signal through in-house software and hardware tools. Approximately 2500 projections were acquired over a period of 8-10 minutes in half-fan mode with the half bow-tie filter. Using the external surrogate, the CBCT projections were sorted into 10 breathing phases and reconstructed with an in-house FDK reconstruction algorithm. Errors in respiration sorting, reconstruction, and acquisition were carefully identified and corrected. DATA FORMAT AND USAGE NOTES: 4DCT and 4DCBCT images are available in DICOM format and structures through DICOM-RT RTSTRUCT format. All data are stored in the Cancer Imaging Archive (TCIA, http://www.cancerimagingarchive.net/) as collection 4D-Lung and are publicly available. DISCUSSION: Due to high temporal frequency sampling, redundant (4DCT and 4DCBCT) data at similar timepoints, oversampled 4DCBCT, and fiducial markers, this dataset can support studies in image-guided and image-guided adaptive radiotherapy, assessment of 4D voxel trajectory variability, and development and validation of new tools for image registration and motion management.
© 2016 American Association of Physicists in Medicine.

Entities:  

Keywords:  4D imaging; computed tomography; cone beam computed tomography lung

Mesh:

Year:  2017        PMID: 27991677      PMCID: PMC5912888          DOI: 10.1002/mp.12059

Source DB:  PubMed          Journal:  Med Phys        ISSN: 0094-2405            Impact factor:   4.071


  22 in total

1.  Four-dimensional cone beam CT with adaptive gantry rotation and adaptive data sampling.

Authors:  Jun Lu; Thomas M Guerrero; Peter Munro; Andrew Jeung; Pai-Chun M Chi; Peter Balter; X Ronald Zhu; Radhe Mohan; Tinsu Pan
Journal:  Med Phys       Date:  2007-09       Impact factor: 4.071

2.  Intra thoracic anatomical changes in lung cancer patients during the course of radiotherapy.

Authors:  Margriet Kwint; Sanne Conijn; Eva Schaake; Joost Knegjens; Maddalena Rossi; Peter Remeijer; Jan-Jakob Sonke; Jose Belderbos
Journal:  Radiother Oncol       Date:  2014-11-06       Impact factor: 6.280

3.  The Cancer Imaging Archive (TCIA): maintaining and operating a public information repository.

Authors:  Kenneth Clark; Bruce Vendt; Kirk Smith; John Freymann; Justin Kirby; Paul Koppel; Stephen Moore; Stanley Phillips; David Maffitt; Michael Pringle; Lawrence Tarbox; Fred Prior
Journal:  J Digit Imaging       Date:  2013-12       Impact factor: 4.056

4.  Six degrees-of-freedom prostate and lung tumor motion measurements using kilovoltage intrafraction monitoring.

Authors:  Chen-Yu Huang; Joubin Nasehi Tehrani; Jin Aun Ng; Jeremy Booth; Paul Keall
Journal:  Int J Radiat Oncol Biol Phys       Date:  2014-11-25       Impact factor: 7.038

5.  Potential of adaptive radiotherapy to escalate the radiation dose in combined radiochemotherapy for locally advanced non-small cell lung cancer.

Authors:  Matthias Guckenberger; Juergen Wilbert; Anne Richter; Kurt Baier; Michael Flentje
Journal:  Int J Radiat Oncol Biol Phys       Date:  2010-08-12       Impact factor: 7.038

6.  Daily megavoltage computed tomography in lung cancer radiotherapy: correlation between volumetric changes and local outcome.

Authors:  Samuel Bral; Mark De Ridder; Michaël Duchateau; Thierry Gevaert; Benedikt Engels; Denis Schallier; Guy Storme
Journal:  Int J Radiat Oncol Biol Phys       Date:  2010-07-16       Impact factor: 7.038

7.  Image-guided radiotherapy via daily online cone-beam CT substantially reduces margin requirements for stereotactic lung radiotherapy.

Authors:  Inga S Grills; Geoffrey Hugo; Larry L Kestin; Ana Paula Galerani; K Kenneth Chao; Jennifer Wloch; Di Yan
Journal:  Int J Radiat Oncol Biol Phys       Date:  2007-10-29       Impact factor: 7.038

8.  Weekly kilovoltage cone-beam computed tomography for detection of dose discrepancies during (chemo)radiotherapy for head and neck cancer.

Authors:  Bregtje C M Hermans; Lucas C G G Persoon; Mark Podesta; Frank J P Hoebers; Frank Verhaegen; Esther G C Troost
Journal:  Acta Oncol       Date:  2015-07-29       Impact factor: 4.089

9.  Evaluation of 4-dimensional computed tomography to 4-dimensional cone-beam computed tomography deformable image registration for lung cancer adaptive radiation therapy.

Authors:  Salim Balik; Elisabeth Weiss; Nuzhat Jan; Nicholas Roman; William C Sleeman; Mirek Fatyga; Gary E Christensen; Cheng Zhang; Martin J Murphy; Jun Lu; Paul Keall; Jeffrey F Williamson; Geoffrey D Hugo
Journal:  Int J Radiat Oncol Biol Phys       Date:  2013-02-22       Impact factor: 7.038

10.  A block matching-based registration algorithm for localization of locally advanced lung tumors.

Authors:  Scott P Robertson; Elisabeth Weiss; Geoffrey D Hugo
Journal:  Med Phys       Date:  2014-04       Impact factor: 4.071

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  16 in total

1.  Four-Dimensional Cone-Beam Computed Tomography Image Compression Using Video Encoder for Radiotherapy.

Authors:  Hui Yan; Yexiong Li; Jianrong Dai
Journal:  J Digit Imaging       Date:  2020-10       Impact factor: 4.056

2.  Augmentation of CBCT Reconstructed From Under-Sampled Projections Using Deep Learning.

Authors:  Zhuoran Jiang; Yingxuan Chen; Yawei Zhang; Yun Ge; Fang-Fang Yin; Lei Ren
Journal:  IEEE Trans Med Imaging       Date:  2019-04-23       Impact factor: 10.048

3.  Data-driven respiratory motion compensation for four-dimensional cone-beam computed tomography (4D-CBCT) using groupwise deformable registration.

Authors:  Matthew J Riblett; Gary E Christensen; Elisabeth Weiss; Geoffrey D Hugo
Journal:  Med Phys       Date:  2018-09-18       Impact factor: 4.071

4.  SPARE: Sparse-view reconstruction challenge for 4D cone-beam CT from a 1-min scan.

Authors:  Chun-Chien Shieh; Yesenia Gonzalez; Bin Li; Xun Jia; Simon Rit; Cyril Mory; Matthew Riblett; Geoffrey Hugo; Yawei Zhang; Zhuoran Jiang; Xiaoning Liu; Lei Ren; Paul Keall
Journal:  Med Phys       Date:  2019-07-19       Impact factor: 4.071

5.  Prior image-guided cone-beam computed tomography augmentation from under-sampled projections using a convolutional neural network.

Authors:  Zhuoran Jiang; Zeyu Zhang; Yushi Chang; Yun Ge; Fang-Fang Yin; Lei Ren
Journal:  Quant Imaging Med Surg       Date:  2021-12

6.  Unsupervised computed tomography and cone-beam computed tomography image registration using a dual attention network.

Authors:  Rui Hu; Hui Yan; Fudong Nian; Ronghu Mao; Teng Li
Journal:  Quant Imaging Med Surg       Date:  2022-07

7.  Exploring correlation information for image compression of four-dimensional computed tomography.

Authors:  Hui Yan; Yexiong Li; Jianrong Dai
Journal:  Quant Imaging Med Surg       Date:  2019-07

8.  Generalizable cone beam CT esophagus segmentation using physics-based data augmentation.

Authors:  Sadegh R Alam; Tianfang Li; Pengpeng Zhang; Si-Yuan Zhang; Saad Nadeem
Journal:  Phys Med Biol       Date:  2021-03-04       Impact factor: 3.609

9.  Is an analytical dose engine sufficient for intensity modulated proton therapy in lung cancer?

Authors:  Suliana Teoh; Francesca Fiorini; Ben George; Katherine A Vallis; Frank Van den Heuvel
Journal:  Br J Radiol       Date:  2019-11-20       Impact factor: 3.629

10.  Predicting spatial esophageal changes in a multimodal longitudinal imaging study via a convolutional recurrent neural network.

Authors:  Chuang Wang; Sadegh R Alam; Siyuan Zhang; Yu-Chi Hu; Saad Nadeem; Neelam Tyagi; Andreas Rimner; Wei Lu; Maria Thor; Pengpeng Zhang
Journal:  Phys Med Biol       Date:  2020-11-27       Impact factor: 3.609

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