Literature DB >> 27990036

Probabilistic Cause-of-death Assignment using Verbal Autopsies.

Tyler H McCormick1, Zehang Richard Li2, Clara Calvert3, Amelia C Crampin4, Kathleen Kahn5, Samuel J Clark6.   

Abstract

In regions without complete-coverage civil registration and vital statistics systems there is uncertainty about even the most basic demographic indicators. In such regions the majority of deaths occur outside hospitals and are not recorded. Worldwide, fewer than one-third of deaths are assigned a cause, with the least information available from the most impoverished nations. In populations like this, verbal autopsy (VA) is a commonly used tool to assess cause of death and estimate cause-specific mortality rates and the distribution of deaths by cause. VA uses an interview with caregivers of the decedent to elicit data describing the signs and symptoms leading up to the death. This paper develops a new statistical tool known as InSilicoVA to classify cause of death using information acquired through VA. InSilicoVA shares uncertainty between cause of death assignments for specific individuals and the distribution of deaths by cause across the population. Using side-by-side comparisons with both observed and simulated data, we demonstrate that InSilicoVA has distinct advantages compared to currently available methods.

Entities:  

Year:  2016        PMID: 27990036      PMCID: PMC5154628          DOI: 10.1080/01621459.2016.1152191

Source DB:  PubMed          Journal:  J Am Stat Assoc        ISSN: 0162-1459            Impact factor:   5.033


  17 in total

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Authors:  Jeremy M G Taylor; Lu Wang; Zhiguo Li
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4.  Simplified Symptom Pattern Method for verbal autopsy analysis: multisite validation study using clinical diagnostic gold standards.

Authors:  Christopher Jl Murray; Spencer L James; Jeanette K Birnbaum; Michael K Freeman; Rafael Lozano; Alan D Lopez
Journal:  Popul Health Metr       Date:  2011-08-04

5.  Translating global health research aims into action: the example of the ALPHA network.

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Journal:  Trop Med Int Health       Date:  2010-01-11       Impact factor: 2.622

6.  Designing verbal autopsy studies.

Authors:  Gary King; Ying Lu; Kenji Shibuya
Journal:  Popul Health Metr       Date:  2010-06-23

7.  Population Health Metrics Research Consortium gold standard verbal autopsy validation study: design, implementation, and development of analysis datasets.

Authors:  Christopher Jl Murray; Alan D Lopez; Robert Black; Ramesh Ahuja; Said Mohd Ali; Abdullah Baqui; Lalit Dandona; Emily Dantzer; Vinita Das; Usha Dhingra; Arup Dutta; Wafaie Fawzi; Abraham D Flaxman; Sara Gómez; Bernardo Hernández; Rohina Joshi; Henry Kalter; Aarti Kumar; Vishwajeet Kumar; Rafael Lozano; Marilla Lucero; Saurabh Mehta; Bruce Neal; Summer Lockett Ohno; Rajendra Prasad; Devarsetty Praveen; Zul Premji; Dolores Ramírez-Villalobos; Hazel Remolador; Ian Riley; Minerva Romero; Mwanaidi Said; Diozele Sanvictores; Sunil Sazawal; Veronica Tallo
Journal:  Popul Health Metr       Date:  2011-08-04

8.  Random forests for verbal autopsy analysis: multisite validation study using clinical diagnostic gold standards.

Authors:  Abraham D Flaxman; Alireza Vahdatpour; Sean Green; Spencer L James; Christopher Jl Murray
Journal:  Popul Health Metr       Date:  2011-08-04

9.  Profile: the Karonga Health and Demographic Surveillance System.

Authors:  Amelia C Crampin; Albert Dube; Sebastian Mboma; Alison Price; Menard Chihana; Andreas Jahn; Angela Baschieri; Anna Molesworth; Elnaeus Mwaiyeghele; Keith Branson; Sian Floyd; Nuala McGrath; Paul E M Fine; Neil French; Judith R Glynn; Basia Zaba
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10.  Using verbal autopsy to measure causes of death: the comparative performance of existing methods.

Authors:  Christopher J L Murray; Rafael Lozano; Abraham D Flaxman; Peter Serina; David Phillips; Andrea Stewart; Spencer L James; Alireza Vahdatpour; Charles Atkinson; Michael K Freeman; Summer Lockett Ohno; Robert Black; Said Mohammed Ali; Abdullah H Baqui; Lalit Dandona; Emily Dantzer; Gary L Darmstadt; Vinita Das; Usha Dhingra; Arup Dutta; Wafaie Fawzi; Sara Gómez; Bernardo Hernández; Rohina Joshi; Henry D Kalter; Aarti Kumar; Vishwajeet Kumar; Marilla Lucero; Saurabh Mehta; Bruce Neal; Devarsetty Praveen; Zul Premji; Dolores Ramírez-Villalobos; Hazel Remolador; Ian Riley; Minerva Romero; Mwanaidi Said; Diozele Sanvictores; Sunil Sazawal; Veronica Tallo; Alan D Lopez
Journal:  BMC Med       Date:  2014-01-09       Impact factor: 8.775

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  30 in total

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Journal:  Ann Appl Stat       Date:  2020-04-16       Impact factor: 2.083

2.  Using Bayesian Latent Gaussian Graphical Models to Infer Symptom Associations in Verbal Autopsies.

Authors:  Zehang Richard Li; Tyler H McComick; Samuel J Clark
Journal:  Bayesian Anal       Date:  2019-09-24       Impact factor: 3.728

3.  A Semantic-Based Framework for Verbal Autopsy to Identify the Cause of Maternal Death.

Authors:  Muhammad I A Durrani; Tabbasum Naz; Muhammad Atif; Numra Khalid; Alessia Amelio
Journal:  Appl Clin Inform       Date:  2021-09-22       Impact factor: 2.762

4.  Comparison of the Causes of Death Identified Using Automated Verbal Autopsy and Complete Autopsy among Brought-in-Dead Cases at a Tertiary Hospital in Sub-Sahara Africa.

Authors:  Yuta Yokobori; Jun Matsuura; Yasuo Sugiura; Charles Mutemba; Peter Julius; Cordelia Himwaze; Martin Nyahoda; Chomba Mwango; Lloyd Kazhumbula; Motoyuki Yuasa; Brian Munkombwe; Luchenga Mucheleng'anga
Journal:  Appl Clin Inform       Date:  2022-06-15       Impact factor: 2.762

5.  Regularized Bayesian transfer learning for population-level etiological distributions.

Authors:  Abhirup Datta; Jacob Fiksel; Agbessi Amouzou; Scott L Zeger
Journal:  Biostatistics       Date:  2021-10-13       Impact factor: 5.899

6.  Bayesian Joint Spike-and-Slab Graphical Lasso.

Authors:  Zehang Richard Li; Tyler H McCormick; Samuel J Clark
Journal:  Proc Mach Learn Res       Date:  2019-06

7.  Social and demographic correlates of cardiovascular mortality in the Kassena-Nankana districts of Ghana: a verbal post-mortem analysis.

Authors:  Abraham R Oduro; Jordan Francke; Patrick Ansah; Elizabeth F Jackson; George Wak; James F Phillips; Leah A Haykin; Daniel Azongo; Ayaga A Bawah; Paul Welaga; Abraham Hodgson; Raymond Aborigo; David J Heller
Journal:  Int J Epidemiol       Date:  2022-05-09       Impact factor: 9.685

8.  The WHO 2016 verbal autopsy instrument: An international standard suitable for automated analysis by InterVA, InSilicoVA, and Tariff 2.0.

Authors:  Erin K Nichols; Peter Byass; Daniel Chandramohan; Samuel J Clark; Abraham D Flaxman; Robert Jakob; Jordana Leitao; Nicolas Maire; Chalapati Rao; Ian Riley; Philip W Setel
Journal:  PLoS Med       Date:  2018-01-10       Impact factor: 11.069

9.  Bayesian hierarchical factor regression models to infer cause of death from verbal autopsy data.

Authors:  Kelly R Moran; Elizabeth L Turner; David Dunson; Amy H Herring
Journal:  J R Stat Soc Ser C Appl Stat       Date:  2021-02-23       Impact factor: 1.680

10.  Trends in the burden of HIV mortality after roll-out of antiretroviral therapy in KwaZulu-Natal, South Africa: an observational community cohort study.

Authors:  Georges Reniers; Sylvia Blom; Clara Calvert; Alexandra Martin-Onraet; Abraham J Herbst; Jeffrey W Eaton; Jacob Bor; Emma Slaymaker; Zehang R Li; Samuel J Clark; Till Bärnighausen; Basia Zaba; Victoria Hosegood
Journal:  Lancet HIV       Date:  2016-12-10       Impact factor: 16.070

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