Literature DB >> 27984802

Microbial soil community analyses for forensic science: Application to a blind test.

Sandrine Demanèche1, Leif Schauser2, Lorna Dawson3, Laure Franqueville4, Pascal Simonet4.   

Abstract

Soil complexity, heterogeneity and transferability make it valuable in forensic investigations to help obtain clues as to the origin of an unknown sample, or to compare samples from a suspect or object with samples collected at a crime scene. In a few countries, soil analysis is used in matters from site verification to estimates of time after death. However, up to date the application or use of soil information in criminal investigations has been limited. In particular, comparing bacterial communities in soil samples could be a useful tool for forensic science. To evaluate the relevance of this approach, a blind test was performed to determine the origin of two questioned samples (one from the mock crime scene and the other from a 50:50 mixture of the crime scene and the alibi site) compared to three control samples (soil samples from the crime scene, from a context site 25m away from the crime scene and from the alibi site which was the suspect's home). Two biological methods were used, Ribosomal Intergenic Spacer Analysis (RISA), and 16S rRNA gene sequencing with Illumina Miseq, to evaluate the discriminating power of soil bacterial communities. Both techniques discriminated well between soils from a single source, but a combination of both techniques was necessary to show that the origin was a mixture of soils. This study illustrates the potential of applying microbial ecology methodologies in soil as an evaluative forensic tool.
Copyright © 2016 Elsevier Ireland Ltd. All rights reserved.

Keywords:  Bacteria; Forensic geoscience; High throughput sequencing; Ribosomal Intergenic Spacer Analysis; Soil DNA

Mesh:

Substances:

Year:  2016        PMID: 27984802     DOI: 10.1016/j.forsciint.2016.12.004

Source DB:  PubMed          Journal:  Forensic Sci Int        ISSN: 0379-0738            Impact factor:   2.395


  8 in total

1.  Bioinformatics Approach to Assess the Biogeographical Patterns of Soil Communities: The Utility for Soil Provenance.

Authors:  Natalie Damaso; Julian Mendel; Maria Mendoza; Eric J von Wettberg; Giri Narasimhan; DeEtta Mills
Journal:  J Forensic Sci       Date:  2018-01-22       Impact factor: 1.832

2.  Exploring plant diversity through soil DNA in Thai national parks for influencing land reform and agriculture planning.

Authors:  Maslin Osathanunkul; Nipitpong Sawongta; Wittaya Pheera; Nikolaos Pechlivanis; Fotis Psomopoulos; Panagiotis Madesis
Journal:  PeerJ       Date:  2021-08-02       Impact factor: 2.984

3.  The spatial variation of soil bacterial community assembly processes affects the accuracy of source tracking in ten major Chinese cities.

Authors:  Teng Yang; Yu Shi; Jun Zhu; Chang Zhao; Jianmei Wang; Zhiyong Liu; Xiao Fu; Xu Liu; Jiangwei Yan; Meiqing Yuan; Haiyan Chu
Journal:  Sci China Life Sci       Date:  2021-01-08       Impact factor: 6.038

4.  Single Fragment or Bulk Soil DNA Metabarcoding: Which is Better for Characterizing Biological Taxa Found in Surface Soils for Sample Separation?

Authors:  Laura M Boggs; Melissa K R Scheible; Gustavo Machado; Kelly A Meiklejohn
Journal:  Genes (Basel)       Date:  2019-06-06       Impact factor: 4.096

Review 5.  Forensic Applications of Microbiomics: A Review.

Authors:  Jake M Robinson; Zohar Pasternak; Christopher E Mason; Eran Elhaik
Journal:  Front Microbiol       Date:  2021-01-13       Impact factor: 5.640

6.  Applications of massively parallel sequencing in forensic genetics.

Authors:  Thássia Mayra Telles Carratto; Vitor Matheus Soares Moraes; Tamara Soledad Frontanilla Recalde; Maria Luiza Guimarães de Oliveira; Celso Teixeira Mendes-Junior
Journal:  Genet Mol Biol       Date:  2022-09-19       Impact factor: 2.087

Review 7.  Usefulness of Microbiome for Forensic Geolocation: A Review.

Authors:  Christian Haarkötter; María Saiz; Xiomara Gálvez; María Isabel Medina-Lozano; Juan Carlos Álvarez; José Antonio Lorente
Journal:  Life (Basel)       Date:  2021-11-30

Review 8.  Analysis of Microbial Communities: An Emerging Tool in Forensic Sciences.

Authors:  Audrey Gouello; Catherine Dunyach-Remy; Christian Siatka; Jean-Philippe Lavigne
Journal:  Diagnostics (Basel)       Date:  2021-12-21
  8 in total

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