Literature DB >> 27974091

Arachidicoccus ginsenosidivorans sp. nov., with ginsenoside-converting activity isolated from ginseng cultivating soil.

Muhammad Zubair Siddiqi1,2, Zubair Aslam3, Wan-Taek Im2,1.   

Abstract

A Gram-reaction-negative, catalase- and oxidase-positive, aerobic, non-motile, light yellow and rod-shaped bacterium (designated Gsoil 809T) isolated from soil of ginseng field, was characterized by a polyphasic approach to clarify its taxonomic position. Strain Gsoil 809T was observed to grow optimally at 30 °C and at pH 7.0 on nutrient agar medium. Strain Gsoil 809T possessed β-glucosidase activity, which was responsible for its ability to transform protopanaxatriol-type ginsenoside Rg1 to ginsenoside Rh1. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain Gsoil 809T belongs to the genus Arachidicoccus of the family Chitinophagaceae and was most closely related to Arachidicoccusrhizosphaerae Vu-144T (98.1 % 16S rRNA gene sequence similarity). The DNA G+C content was 39.4 mol%. The DNA-DNA hybridization value between strain Gsoil 809T and A.rhizosphaerae Vu-144T was 41.27±1.03 %. The major polar lipids were phosphatidylethanolamine and an unknown polar lipid. The predominant quinone was MK-7. The major fatty acids were iso-C15 : 0, iso-C15 : 1 G, iso-C17 : 0 3-OH and summed feature 3, which supported the affiliation of Gsoil 809T to the genus Arachidicoccus. Strain Gsoil 809T contained homospermidineas the major polyamine. Moreover, the physiological and biochemical test results and low DNA-DNA relatedness value allowed the phenotypic and genotypic differentiation of strain Gsoil 809T from recognized species of the genus Arachidicoccus. Therefore, strain Gsoil 809T represents a novel species of the genus Arachidicoccus, for which the name Arachidicoccus ginsenosidivorans sp. nov. is proposed. The type strain is Gsoil 809T (=KCTC 22820T=JCM 30984T).

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Year:  2017        PMID: 27974091     DOI: 10.1099/ijsem.0.001720

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  7 in total

1.  Mucilaginibacter hankyongensis sp. nov., isolated from soil of ginseng field Baekdu Mountain.

Authors:  Qingmei Liu; Muhammad Zubair Siddiqi; Mi-Sun Kim; Sang Yong Kim; Wan-Taek Im
Journal:  J Microbiol       Date:  2017-06-30       Impact factor: 3.422

2.  Brevibacterium anseongense sp. nov., isolated from soil of ginseng field.

Authors:  Mi-Seon Jung; Xiao-Tian Quan; Muhammad Zubair Siddiqi; Qingzhen Liu; Sang Yong Kim; Ji-Hyang Wee; Wan Taek Im
Journal:  J Microbiol       Date:  2018-08-22       Impact factor: 3.422

3.  Isolation, characterisation and genome analysis of a novel ginsenosides hydrolysing bacterium Ginsengibacter hankyongi gen. nov., sp. nov. isolated from soil.

Authors:  Muhammad Zubair Siddiqi; Md Amdadul Huq; Wan-Taek Im
Journal:  Antonie Van Leeuwenhoek       Date:  2020-11-23       Impact factor: 2.271

4.  Mucilaginibacter ginsenosidivorans sp. nov., Isolated from Soil of Ginseng Field.

Authors:  Minseok M Kim; Muhammad Zubair Siddiqi; Wan-Taek Im
Journal:  Curr Microbiol       Date:  2017-08-18       Impact factor: 2.188

5.  Actinomadura hankyongense sp. nov. Isolated From Soil of Ginseng Cultivating Field.

Authors:  Muhammad Zubair Siddiqi; Qingmei Liu; Kang Duk Choi; Soon Youl Lee; Jae Hag Lee; Wan Taek Im
Journal:  Curr Microbiol       Date:  2018-07-06       Impact factor: 2.188

6.  Mesorhizobium hankyongi sp. nov. Isolated from Soil of Ginseng Cultivating Field.

Authors:  Muhammad Zubair Siddiqi; Sadiq Shah; Kang Duk Choi; Soon Youl Lee; Sang Young Kim; Wan-Taek Im
Journal:  Curr Microbiol       Date:  2018-07-23       Impact factor: 2.188

7.  Colonization of Listeria monocytogenes in potting soils as affected by bacterial community composition, storage temperature, and natural amendment.

Authors:  Jae-Hyun Yoon; Sol-A Kim; Won-Bo Shim; Dong-Cheol Seo; Songyi Choi; Sun-Young Lee; Se-Ri Kim
Journal:  Food Sci Biotechnol       Date:  2021-06-11       Impact factor: 3.231

  7 in total

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