Literature DB >> 2796996

Characterization and expression of a spliced leader RNA in the parasitic nematode Ascaris lumbricoides var. suum.

T W Nilsen1, J Shambaugh, J Denker, G Chubb, C Faser, L Putnam, K Bennett.   

Abstract

The parasitic nematode Ascaris spp. contains a 22-nucleotide spliced-leader (SL) sequence identical to the trans-SL previously described in Caenorhabditis elegans and other nematodes. The SL comprises the first 22 nucleotides of a approximately 110-base RNA and is transcribed by RNA polymerase II. The SL RNA contains a trimethylguanosine cap and a consensus Sm binding site. Furthermore, the Ascaris SL RNA has the potential to adopt a secondary structure which is nearly identical to potential secondary structures of similar SL RNAs in C. elegans and Brugia malayi.

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Year:  1989        PMID： 2796996      PMCID： PMC362403          DOI： 10.1128/mcb.9.8.3543-3547.1989

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN： 0270-7306            Impact factor:   4.272


  18 in total

1.  Electrophoretic patterns of deadenylylated chorion and globin mRNAs.

Authors:  J N Vournakis; A Efstratiadis; F C Kafatos
Journal:  Proc Natl Acad Sci U S A       Date:  1975-08       Impact factor: 11.205

2.  Sequences required for 3' end formation of human U2 small nuclear RNA.

Authors:  C Y Yuo; M Ares; A M Weiner
Journal:  Cell       Date:  1985-08       Impact factor: 41.582

Review 3.  Cis and trans mRNA splicing in C. elegans.

Authors:  T Blumenthal; J Thomas
Journal:  Trends Genet       Date:  1988-11       Impact factor: 11.639

4.  3' end formation of U1 snRNA precursors is coupled to transcription from snRNA promoters.

Authors:  H E de Vegvar; E Lund; J E Dahlberg
Journal:  Cell       Date:  1986-10-24       Impact factor: 41.582

5.  Direct chemical method for sequencing RNA.

Authors:  D A Peattie
Journal:  Proc Natl Acad Sci U S A       Date:  1979-04       Impact factor: 11.205

6.  Specific labeling of 3' termini of RNA with T4 RNA ligase.

Authors:  T E England; A G Bruce; O C Uhlenbeck
Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600

7.  Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information.

Authors:  M Zuker; P Stiegler
Journal:  Nucleic Acids Res       Date:  1981-01-10       Impact factor: 16.971

8.  Neither a germ line-specific nor several somatically expressed genes are lost or rearranged during embryonic chromatin diminution in the nematode Ascaris lumbricoides var. suum.

Authors:  K L Bennett; S Ward
Journal:  Dev Biol       Date:  1986-11       Impact factor: 3.582

9.  Formation of the 3' end of U1 snRNA is directed by a conserved sequence located downstream of the coding region.

Authors:  N Hernandez
Journal:  EMBO J       Date:  1985-07       Impact factor: 11.598

10.  A trans-spliced leader sequence on actin mRNA in C. elegans.

Authors:  M Krause; D Hirsh
Journal:  Cell       Date:  1987-06-19       Impact factor: 41.582
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  30 in total

1.  Transient expression of DNA and RNA in parasitic helminths by using particle bombardment.

Authors:  R E Davis; A Parra; P T LoVerde; E Ribeiro; G Glorioso; S Hodgson
Journal:  Proc Natl Acad Sci U S A       Date:  1999-07-20       Impact factor: 11.205

2.  Functional selection of splicing enhancers that stimulate trans-splicing in vitro.

Authors:  L A Boukis; J P Bruzik
Journal:  RNA       Date:  2001-06       Impact factor: 4.942

3.  Spliced leader RNA and 5S rRNA genes in Herpetomonas spp. are genetically linked.

Authors:  S Aksoy
Journal:  Nucleic Acids Res       Date:  1992-02-25       Impact factor: 16.971

4.  Mutant Caenorhabditis elegans RNA polymerase II with a 20,000-fold reduced sensitivity to alpha-amanitin.

Authors:  T M Rogalski; M Golomb; D L Riddle
Journal:  Genetics       Date:  1990-12       Impact factor: 4.562

Review 5.  mRNA processing in the Trypanosomatidae.

Authors:  K Perry; N Agabian
Journal:  Experientia       Date:  1991-02-15

6.  Insertion of part of an intron into the 5' untranslated region of a Caenorhabditis elegans gene converts it into a trans-spliced gene.

Authors:  R Conrad; J Thomas; J Spieth; T Blumenthal
Journal:  Mol Cell Biol       Date:  1991-04       Impact factor: 4.272

7.  Systematic analysis and evolution of 5S ribosomal DNA in metazoans.

Authors:  J Vierna; S Wehner; C Höner zu Siederdissen; A Martínez-Lage; M Marz
Journal:  Heredity (Edinb)       Date:  2013-07-10       Impact factor: 3.821

8.  In Euglena, spliced-leader RNA (SL-RNA) and 5S rRNA genes are tandemly repeated.

Authors:  M Keller; L H Tessier; R L Chan; J H Weil; P Imbault
Journal:  Nucleic Acids Res       Date:  1992-04-11       Impact factor: 16.971

9.  Transcription termination and 3'-End processing of the spliced leader RNA in kinetoplastids.

Authors:  N R Sturm; M C Yu; D A Campbell
Journal:  Mol Cell Biol       Date:  1999-02       Impact factor: 4.272

10.  In situ hybridization of neuropeptide-encoding transcripts afp-1, afp-3, and afp-4 in neurons of the nematode Ascaris suum.

Authors:  Jennifer Cho Nanda; Antony O W Stretton
Journal:  J Comp Neurol       Date:  2010-03-15       Impact factor: 3.215
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