Literature DB >> 27956612

Interrogating the Escherichia coli cell cycle by cell dimension perturbations.

Hai Zheng1,2, Po-Yi Ho3, Meiling Jiang1, Bin Tang4, Weirong Liu1,2, Dengjin Li1, Xuefeng Yu5, Nancy E Kleckner6, Ariel Amir7, Chenli Liu8,2.   

Abstract

Bacteria tightly regulate and coordinate the various events in their cell cycles to duplicate themselves accurately and to control their cell sizes. Growth of Escherichia coli, in particular, follows a relation known as Schaechter's growth law. This law says that the average cell volume scales exponentially with growth rate, with a scaling exponent equal to the time from initiation of a round of DNA replication to the cell division at which the corresponding sister chromosomes segregate. Here, we sought to test the robustness of the growth law to systematic perturbations in cell dimensions achieved by varying the expression levels of mreB and ftsZ We found that decreasing the mreB level resulted in increased cell width, with little change in cell length, whereas decreasing the ftsZ level resulted in increased cell length. Furthermore, the time from replication termination to cell division increased with the perturbed dimension in both cases. Moreover, the growth law remained valid over a range of growth conditions and dimension perturbations. The growth law can be quantitatively interpreted as a consequence of a tight coupling of cell division to replication initiation. Thus, its robustness to perturbations in cell dimensions strongly supports models in which the timing of replication initiation governs that of cell division, and cell volume is the key phenomenological variable governing the timing of replication initiation. These conclusions are discussed in the context of our recently proposed "adder-per-origin" model, in which cells add a constant volume per origin between initiations and divide a constant time after initiation.

Entities:  

Keywords:  DNA replication; E. coli; cell cycle; cell dimension; cell growth

Mesh:

Substances:

Year:  2016        PMID: 27956612      PMCID: PMC5206551          DOI: 10.1073/pnas.1617932114

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  40 in total

1.  Growth rate and generation time of bacteria, with special reference to continuous culture.

Authors:  E O POWELL
Journal:  J Gen Microbiol       Date:  1956-12

2.  Chromosome and replisome dynamics in E. coli: loss of sister cohesion triggers global chromosome movement and mediates chromosome segregation.

Authors:  David Bates; Nancy Kleckner
Journal:  Cell       Date:  2005-06-17       Impact factor: 41.582

3.  The bacterial actin MreB rotates, and rotation depends on cell-wall assembly.

Authors:  Sven van Teeffelen; Siyuan Wang; Leon Furchtgott; Kerwyn Casey Huang; Ned S Wingreen; Joshua W Shaevitz; Zemer Gitai
Journal:  Proc Natl Acad Sci U S A       Date:  2011-09-08       Impact factor: 11.205

4.  The Synchronization of Replication and Division Cycles in Individual E. coli Cells.

Authors:  Mats Wallden; David Fange; Ebba Gregorsson Lundius; Özden Baltekin; Johan Elf
Journal:  Cell       Date:  2016-07-28       Impact factor: 41.582

5.  Determination of deoxyribonucleic acid replication time in exponentially growing Escherichia coli B/r.

Authors:  G Churchward; H Bremer
Journal:  J Bacteriol       Date:  1977-06       Impact factor: 3.490

6.  Individuality and universality in the growth-division laws of single E. coli cells.

Authors:  Andrew S Kennard; Matteo Osella; Avelino Javer; Jacopo Grilli; Philippe Nghe; Sander J Tans; Pietro Cicuta; Marco Cosentino Lagomarsino
Journal:  Phys Rev E       Date:  2016-01-19       Impact factor: 2.529

7.  The DnaA protein determines the initiation mass of Escherichia coli K-12.

Authors:  A Løbner-Olesen; K Skarstad; F G Hansen; K von Meyenburg; E Boye
Journal:  Cell       Date:  1989-06-02       Impact factor: 41.582

8.  A constant size extension drives bacterial cell size homeostasis.

Authors:  Manuel Campos; Ivan V Surovtsev; Setsu Kato; Ahmad Paintdakhi; Bruno Beltran; Sarah E Ebmeier; Christine Jacobs-Wagner
Journal:  Cell       Date:  2014-12-04       Impact factor: 41.582

9.  Single-Cell Analysis of Growth in Budding Yeast and Bacteria Reveals a Common Size Regulation Strategy.

Authors:  Ilya Soifer; Lydia Robert; Ariel Amir
Journal:  Curr Biol       Date:  2016-01-14       Impact factor: 10.834

10.  The initiation mass for DNA replication in Escherichia coli K-12 is dependent on growth rate.

Authors:  S Wold; K Skarstad; H B Steen; T Stokke; E Boye
Journal:  EMBO J       Date:  1994-05-01       Impact factor: 11.598

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  52 in total

1.  Mechanistic Origin of Cell-Size Control and Homeostasis in Bacteria.

Authors:  Fangwei Si; Guillaume Le Treut; John T Sauls; Stephen Vadia; Petra Anne Levin; Suckjoon Jun
Journal:  Curr Biol       Date:  2019-05-16       Impact factor: 10.834

Review 2.  Sizing up the bacterial cell cycle.

Authors:  Lisa Willis; Kerwyn Casey Huang
Journal:  Nat Rev Microbiol       Date:  2017-08-14       Impact factor: 60.633

3.  General quantitative relations linking cell growth and the cell cycle in Escherichia coli.

Authors:  Hai Zheng; Yang Bai; Meiling Jiang; Taku A Tokuyasu; Xiongliang Huang; Fajun Zhong; Yuqian Wu; Xiongfei Fu; Nancy Kleckner; Terence Hwa; Chenli Liu
Journal:  Nat Microbiol       Date:  2020-05-18       Impact factor: 17.745

Review 4.  Fundamental principles in bacterial physiology-history, recent progress, and the future with focus on cell size control: a review.

Authors:  Suckjoon Jun; Fangwei Si; Rami Pugatch; Matthew Scott
Journal:  Rep Prog Phys       Date:  2018-01-09

5.  Bacterial Size: Can't Escape the Long Arm of the Law.

Authors:  Stephen Vadia; Petra Anne Levin
Journal:  Curr Biol       Date:  2017-05-08       Impact factor: 10.834

6.  A Mechanistic Model of the Regulation of Division Timing by the Circadian Clock in Cyanobacteria.

Authors:  Po-Yi Ho; Bruno M C Martins; Ariel Amir
Journal:  Biophys J       Date:  2020-05-20       Impact factor: 4.033

Review 7.  How to Build a Bacterial Cell: MreB as the Foreman of E. coli Construction.

Authors:  Handuo Shi; Benjamin P Bratton; Zemer Gitai; Kerwyn Casey Huang
Journal:  Cell       Date:  2018-03-08       Impact factor: 41.582

8.  Invariance of Initiation Mass and Predictability of Cell Size in Escherichia coli.

Authors:  Fangwei Si; Dongyang Li; Sarah E Cox; John T Sauls; Omid Azizi; Cindy Sou; Amy B Schwartz; Michael J Erickstad; Yonggun Jun; Xintian Li; Suckjoon Jun
Journal:  Curr Biol       Date:  2017-04-13       Impact factor: 10.834

Review 9.  Bacterial Cell Size: Multifactorial and Multifaceted.

Authors:  Corey S Westfall; Petra Anne Levin
Journal:  Annu Rev Microbiol       Date:  2017-09-08       Impact factor: 15.500

10.  Cell size control and gene expression homeostasis in single-cells.

Authors:  Cesar A Vargas-Garcia; Khem Raj Ghusinga; Abhyudai Singh
Journal:  Curr Opin Syst Biol       Date:  2018-02-02
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