Literature DB >> 27935696

Cyanobacteriochrome Photoreceptors Lacking the Canonical Cys Residue.

Keiji Fushimi1, Nathan C Rockwell2, Gen Enomoto3, Shelley S Martin2, Fei Gan4, Donald A Bryant4,5, Masahiko Ikeuchi3,6, J Clark Lagarias2, Rei Narikawa1.   

Abstract

Cyanobacteriochromes (CBCRs) are cyanobacterial photoreceptors that sense near-ultraviolet to far-red light. Like the distantly related phytochromes, all CBCRs reported to date have a conserved Cys residue (the "canonical Cys" or "first Cys") that forms a thioether linkage to C31 of the linear tetrapyrrole (bilin) chromophore. Detection of ultraviolet, violet, and blue light is performed by at least three subfamilies of two-Cys CBCRs that require both the first Cys and a second Cys that forms a second covalent linkage to C10 of the bilin. In the well-characterized DXCF subfamily, the second Cys is part of a conserved Asp-Xaa-Cys-Phe motif. We here report novel CBCRs lacking the first Cys but retaining the DXCF Cys as part of a conserved Asp-Xaa-Cys-Ile-Pro (DXCIP) motif. Phylogenetic analysis demonstrates that DXCIP CBCRs are a sister to a lineage of DXCF CBCR domains from phototaxis sensors. Three such DXCIP CBCR domains (cce_4193g1, Cyan8802_2776g1, and JSC1_24240) were characterized after recombinant expression in Escherichia coli engineered to produce phycocyanobilin. All three covalently bound bilin and showed unidirectional photoconversion in response to green light. Spectra of acid-denatured proteins in the dark-adapted state do not correspond to those of known bilins. One DXCIP CBCR, cce_4193g1, exhibited very rapid dark reversion consistent with a function as a power sensor. However, Cyan8802_2776g1 exhibited slower dark reversion and would not have such a function. The full-length cce_4193 protein also possesses a DXCF CBCR GAF domain (cce_4193g2) with a covalently bound phycoviolobilin chromophore and a blue/green photocycle. Our studies indicate that CBCRs need not contain the canonical Cys residue to function as photochromic light sensors and that phototaxis proteins containing DXCIP CBCRs may potentially perceive both light quality and light intensity.

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Year:  2016        PMID: 27935696     DOI: 10.1021/acs.biochem.6b00940

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  14 in total

1.  Phototaxis in a wild isolate of the cyanobacterium Synechococcus elongatus.

Authors:  Yiling Yang; Vinson Lam; Marie Adomako; Ryan Simkovsky; Annik Jakob; Nathan C Rockwell; Susan E Cohen; Arnaud Taton; Jingtong Wang; J Clark Lagarias; Annegret Wilde; David R Nobles; Jerry J Brand; Susan S Golden
Journal:  Proc Natl Acad Sci U S A       Date:  2018-12-14       Impact factor: 11.205

2.  Rational conversion of chromophore selectivity of cyanobacteriochromes to accept mammalian intrinsic biliverdin.

Authors:  Keiji Fushimi; Takatsugu Miyazaki; Yuto Kuwasaki; Takahiro Nakajima; Tatsuro Yamamoto; Kazushi Suzuki; Yoshibumi Ueda; Keita Miyake; Yuka Takeda; Jae-Hoon Choi; Hirokazu Kawagishi; Enoch Y Park; Masahiko Ikeuchi; Moritoshi Sato; Rei Narikawa
Journal:  Proc Natl Acad Sci U S A       Date:  2019-04-04       Impact factor: 11.205

3.  Protochromic absorption changes in the two-cysteine photocycle of a blue/orange cyanobacteriochrome.

Authors:  Teppei Sato; Takashi Kikukawa; Risako Miyoshi; Kousuke Kajimoto; Chinatsu Yonekawa; Tomotsumi Fujisawa; Masashi Unno; Toshihiko Eki; Yuu Hirose
Journal:  J Biol Chem       Date:  2019-10-24       Impact factor: 5.157

4.  Molecular characterization of DXCF cyanobacteriochromes from the cyanobacterium Acaryochloris marina identifies a blue-light power sensor.

Authors:  Masumi Hasegawa; Keiji Fushimi; Keita Miyake; Takahiro Nakajima; Yuki Oikawa; Gen Enomoto; Moritoshi Sato; Masahiko Ikeuchi; Rei Narikawa
Journal:  J Biol Chem       Date:  2017-12-11       Impact factor: 5.157

5.  Phytochromes and Cyanobacteriochromes: Photoreceptor Molecules Incorporating a Linear Tetrapyrrole Chromophore.

Authors:  Keiji Fushimi; Rei Narikawa
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

Review 6.  Phytochrome evolution in 3D: deletion, duplication, and diversification.

Authors:  Nathan C Rockwell; J Clark Lagarias
Journal:  New Phytol       Date:  2019-11-02       Impact factor: 10.151

7.  Novel cyanobacteriochrome photoreceptor with the second Cys residue showing atypical orange/blue reversible photoconversion.

Authors:  Hiroki Hoshino; Rei Narikawa
Journal:  Photochem Photobiol Sci       Date:  2022-09-26       Impact factor: 4.328

8.  Cyanobacteriochrome-based photoswitchable adenylyl cyclases (cPACs) for broad spectrum light regulation of cAMP levels in cells.

Authors:  Matthew Blain-Hartung; Nathan C Rockwell; Marcus V Moreno; Shelley S Martin; Fei Gan; Donald A Bryant; J Clark Lagarias
Journal:  J Biol Chem       Date:  2018-04-09       Impact factor: 5.157

9.  Correlating structural and photochemical heterogeneity in cyanobacteriochrome NpR6012g4.

Authors:  Sunghyuk Lim; Qinhong Yu; Sean M Gottlieb; Che-Wei Chang; Nathan C Rockwell; Shelley S Martin; Dorte Madsen; J Clark Lagarias; Delmar S Larsen; James B Ames
Journal:  Proc Natl Acad Sci U S A       Date:  2018-04-09       Impact factor: 11.205

10.  Crystal structure of a far-red-sensing cyanobacteriochrome reveals an atypical bilin conformation and spectral tuning mechanism.

Authors:  Sepalika Bandara; Nathan C Rockwell; Xiaoli Zeng; Zhong Ren; Cong Wang; Heewhan Shin; Shelley S Martin; Marcus V Moreno; J Clark Lagarias; Xiaojing Yang
Journal:  Proc Natl Acad Sci U S A       Date:  2021-03-23       Impact factor: 12.779

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