Literature DB >> 27933917

Exponential Relationships Capturing Atomistic Short-Range Repulsion from the Interacting Quantum Atoms (IQA) Method.

Alex L Wilson1,2, Paul L A Popelier1,2.   

Abstract

A topological atom is a quantum object with a well-defined intra-atomic energy, which includes kinetic energy, Coulomb energy, and exchange energy. In the context of intermolecular interactions, this intra-atomic energy is calculated from supermolecular wave functions, by using the topological partitioning. This partitioning is parameter-free and invokes only the electron density to obtain the topological atoms. In this work, no perturbation theory is used; instead, a single wave function describes the behavior of all van der Waals complexes studied. As the monomers approach each other, frontier atoms deform, which can be monitored through a change in their shape and volume. Here we show that the corresponding atomic deformation energy is very well described by an exponential function, which matches the well-known Buckingham repulsive potential. Moreover, we recover a combination rule that enables the interatomic repulsion energy between topological atoms A and B to be expressed as a function of the interatomic repulsion energy between A and A on one hand, and between B and B on the other hand. As a result a link is established between quantum topological atomic energies and classical well-known interatomic repulsive potentials.

Entities:  

Year:  2016        PMID: 27933917     DOI: 10.1021/acs.jpca.6b10295

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  10 in total

1.  Does the Intra-atomic Deformation Energy of Interacting Quantum Atoms Represent Steric Energy?

Authors:  Benjamin C B Symons; Dominic J Williamson; Campbell M Brooks; Alex L Wilson; Paul L A Popelier
Journal:  ChemistryOpen       Date:  2019-04-01       Impact factor: 2.911

2.  Non-covalent interactions from a Quantum Chemical Topology perspective.

Authors:  Paul L A Popelier
Journal:  J Mol Model       Date:  2022-08-25       Impact factor: 2.172

3.  Unfavorable regions in the ramachandran plot: Is it really steric hindrance? The interacting quantum atoms perspective.

Authors:  Peter I Maxwell; Paul L A Popelier
Journal:  J Comput Chem       Date:  2017-08-25       Impact factor: 3.376

4.  An interacting quantum atom study of model SN 2 reactions (X- ···CH3 X, X = F, Cl, Br, and I).

Authors:  Ibon Alkorta; Joseph C R Thacker; Paul L A Popelier
Journal:  J Comput Chem       Date:  2017-11-10       Impact factor: 3.376

5.  An Interacting Quantum Atoms (IQA) and Relative Energy Gradient (REG) Study of the Halogen Bond with Explicit Analysis of Electron Correlation.

Authors:  Ibon Alkorta; Arnaldo F Silva; Paul L A Popelier
Journal:  Molecules       Date:  2020-06-09       Impact factor: 4.411

6.  Using the Relative Energy Gradient Method with Interacting Quantum Atoms to Determine the Reaction Mechanism and Catalytic Effects in the Peptide Hydrolysis in HIV-1 Protease.

Authors:  Joseph C R Thacker; Mark A Vincent; Paul L A Popelier
Journal:  Chemistry       Date:  2018-07-03       Impact factor: 5.236

7.  Does the Intra-Atomic Deformation Energy of Interacting Quantum Atoms Represent Steric Energy?

Authors:  Benjamin C B Symons; Dominic J Williamson; Campbell M Brooks; Alex L Wilson; Paul L A Popelier
Journal:  ChemistryOpen       Date:  2019-02-08       Impact factor: 2.911

8.  A double exponential potential for van der Waals interaction.

Authors:  Xiongwu Wu; Bernard R Brooks
Journal:  AIP Adv       Date:  2019-06-07       Impact factor: 1.548

9.  The ANANKE relative energy gradient (REG) method to automate IQA analysis over configurational change.

Authors:  Joseph C R Thacker; Paul L A Popelier
Journal:  Theor Chem Acc       Date:  2017-07-05       Impact factor: 1.702

10.  An Interacting Quantum Atoms (IQA) and Relative Energy Gradient (REG) Analysis of the Anomeric Effect.

Authors:  Danish Khan; Leonardo J Duarte; Paul L A Popelier
Journal:  Molecules       Date:  2022-08-06       Impact factor: 4.927

  10 in total

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