Literature DB >> 27932382

Structures and developmental alterations of N-glycans of zebrafish embryos.

Ken Hanzawa1, Noriko Suzuki1,2, Shunji Natsuka1,2.   

Abstract

Zebrafish is a model organism suitable for studying vertebrate development. We analyzed the N-glycan structures of zebrafish embryos and their alterations during zebrafish embryogenesis to obtain basic data for studying the roles of N-glycosylation. Multiple modes of high-performance liquid chromatography and multistage mass spectrometry were used for structural analysis of N-glycans. The N-glycans from deyolked embryos at 36 hours postfertilization, a mid-pharyngula stage, contained relatively higher amounts of complex- and hybrid-type glycans with LacNAc (Galβ1-4GlcNAc) and/or sialyl LacNAc without additional β1,4-Gal, which are commonly found in mammalian tissues, as well as abundant oligomannose-type glycans. Some of the complex- and hybrid-type glycans possessed various extended LacNAc structures, such as Galβ1-4LacNAc, LacNAc-repeat or unique (+/- dHex)-GalNAcα1-GlcNAcβ1-LacNAc. In contrast, the yolk of the embryo contains predominant oligomannose-type glycans and complex-type glycans with Galβ1-4(Siaα2-3)Galβ1-4(Fucα1-3)GlcNAc antennae. N-Glycan profiles obtained from deyolked embryos at different stages showed stage-dependent variation of complex- and hybrid-type glycans. At gastrula and early segmentation stages, complex- and hybrid-type glycans were minor components, and their antenna structures were mainly sialyl LacdiNAc (Siaα2-6GalNAcβ1-4GlcNAc). From the mid-segmentation to pharyngula stages, those with LacNAc and/or α2,6-sialyl LacNAc antenna structures increased remarkably, and those with α2,3-sialyl LacNAc antenna, core α1,6-Fuc and bisecting GlcNAc modifications increased gradually. These results suggest the presence of mechanisms for regulating the antenna structures of complex/hybrid N-glycan biosynthesis in the phylotypic stage of vertebrate development.
© The Author 2017. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Entities:  

Keywords:  HPLC; LacNAc; N-glycosylation; multistage mass spectrometry; zebrafish

Mesh:

Substances:

Year:  2017        PMID: 27932382     DOI: 10.1093/glycob/cww124

Source DB:  PubMed          Journal:  Glycobiology        ISSN: 0959-6658            Impact factor:   4.313


  12 in total

1.  Systems glycomics of adult zebrafish identifies organ-specific sialylation and glycosylation patterns.

Authors:  Nao Yamakawa; Jorick Vanbeselaere; Lan-Yi Chang; Shin-Yi Yu; Lucie Ducrocq; Anne Harduin-Lepers; Junichi Kurata; Kiyoko F Aoki-Kinoshita; Chihiro Sato; Kay-Hooi Khoo; Ken Kitajima; Yann Guerardel
Journal:  Nat Commun       Date:  2018-11-07       Impact factor: 14.919

2.  Quantitative capillary zone electrophoresis-mass spectrometry reveals the N-glycome developmental plan during vertebrate embryogenesis.

Authors:  Yanyan Qu; Kyle M Dubiak; Elizabeth H Peuchen; Matthew M Champion; Zhenbin Zhang; Alex S Hebert; Sarah Wright; Joshua J Coon; Paul W Huber; Norman J Dovichi
Journal:  Mol Omics       Date:  2020-06-15

3.  The changes of immunoglobulin G N-glycosylation in blood lipids and dyslipidaemia.

Authors:  Di Liu; Xi Chu; Hao Wang; Jing Dong; Si-Qi Ge; Zhong-Yao Zhao; Hong-Li Peng; Ming Sun; Li-Juan Wu; Man-Shu Song; Xiu-Hua Guo; Qun Meng; You-Xin Wang; Gordan Lauc; Wei Wang
Journal:  J Transl Med       Date:  2018-08-29       Impact factor: 5.531

4.  Characterisation of N-glycans in the epithelial-like tissue of the rat cochlea.

Authors:  Yoriko Nonomura; Seishiro Sawamura; Ken Hanzawa; Takashi Nishikaze; Sadanori Sekiya; Taiga Higuchi; Fumiaki Nin; Satoru Uetsuka; Hidenori Inohara; Shujiro Okuda; Eiji Miyoshi; Arata Horii; Sugata Takahashi; Shunji Natsuka; Hiroshi Hibino
Journal:  Sci Rep       Date:  2019-02-07       Impact factor: 4.379

Review 5.  Sialic acid derivatization for glycan analysis by mass spectrometry.

Authors:  Takashi Nishikaze
Journal:  Proc Jpn Acad Ser B Phys Biol Sci       Date:  2019       Impact factor: 3.493

6.  Toward robust N-glycomics of various tissue samples that may contain glycans with unknown or unexpected structures.

Authors:  Noriko Suzuki; Tatsuya Abe; Ken Hanzawa; Shunji Natsuka
Journal:  Sci Rep       Date:  2021-03-18       Impact factor: 4.379

7.  Loss of zebrafish atp6v1e1b, encoding a subunit of vacuolar ATPase, recapitulates human ARCL type 2C syndrome and identifies multiple pathobiological signatures.

Authors:  Lore Pottie; Wouter Van Gool; Michiel Vanhooydonck; Franz-Georg Hanisch; Geert Goeminne; Andreja Rajkovic; Paul Coucke; Patrick Sips; Bert Callewaert
Journal:  PLoS Genet       Date:  2021-06-18       Impact factor: 5.917

8.  Poly-N-Acetyllactosamine Neo-Glycoproteins as Nanomolar Ligands of Human Galectin-3: Binding Kinetics and Modeling.

Authors:  Ladislav Bumba; Dominic Laaf; Vojtěch Spiwok; Lothar Elling; Vladimír Křen; Pavla Bojarová
Journal:  Int J Mol Sci       Date:  2018-01-26       Impact factor: 5.923

9.  Site-Specific N-Glycan Characterization of Grass Carp Serum IgM.

Authors:  Yi-Ling Su; Bing Wang; Meng-Die Hu; Zheng-Wei Cui; Jian Wan; Hao Bai; Qian Yang; Yan-Fang Cui; Cui-Hong Wan; Li Xiong; Yong-An Zhang; Hui Geng
Journal:  Front Immunol       Date:  2018-11-14       Impact factor: 7.561

10.  Novel Zebrafish Mono-α2,8-sialyltransferase (ST8Sia VIII): An Evolutionary Perspective of α2,8-Sialylation.

Authors:  Lan-Yi Chang; Elin Teppa; Maxence Noel; Pierre-André Gilormini; Mathieu Decloquement; Cédric Lion; Christophe Biot; Anne-Marie Mir; Virginie Cogez; Philippe Delannoy; Kay Hooi Khoo; Daniel Petit; Yann Guérardel; Anne Harduin-Lepers
Journal:  Int J Mol Sci       Date:  2019-01-31       Impact factor: 5.923

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