Literature DB >> 27930886

Histone Adduction and Its Functional Impact on Epigenetics.

James J Galligan1, Lawrence J Marnett1.   

Abstract

Bioactive electrophiles generated from the oxidation of endogenous and exogenous compounds are a contributing factor in numerous disease states. Their toxicity is largely attributed to the covalent modification of cellular nucleophiles, including protein and DNA. With regard to protein modification, the side-chains of Cys, His, Lys, and Arg residues are critical targets. This results in the generation of undesired protein post-translational modifications (PTMs) that can trigger dire cellular consequences. Notably, histones are Lys- and Arg-rich proteins, providing a fertile source for adduction by both exogenous and endogenous electrophiles. The regulation of histone PTMs plays a critical role in the regulation of chromatin structure and thus gene expression. This perspective focuses on the role of electrophilic protein adduction within the context of chromatin and its potential consequences on cellular law and order.

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Year:  2016        PMID: 27930886      PMCID: PMC5257195          DOI: 10.1021/acs.chemrestox.6b00379

Source DB:  PubMed          Journal:  Chem Res Toxicol        ISSN: 0893-228X            Impact factor:   3.739


  89 in total

1.  Extraction, purification and analysis of histones.

Authors:  David Shechter; Holger L Dormann; C David Allis; Sandra B Hake
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

2.  Crystal structure of the nucleosome core particle at 2.8 A resolution.

Authors:  K Luger; A W Mäder; R K Richmond; D F Sargent; T J Richmond
Journal:  Nature       Date:  1997-09-18       Impact factor: 49.962

Review 3.  Epigenetic modifications in the pathogenesis of diabetic nephropathy.

Authors:  Marpadga A Reddy; Jung Tak Park; Rama Natarajan
Journal:  Semin Nephrol       Date:  2013-07       Impact factor: 5.299

Review 4.  Histone deacetylases and their inhibitors in cancer, neurological diseases and immune disorders.

Authors:  Katrina J Falkenberg; Ricky W Johnstone
Journal:  Nat Rev Drug Discov       Date:  2014-08-18       Impact factor: 84.694

5.  Mechanisms of mutagenesis by the vinyl chloride metabolite chloroacetaldehyde. Effect of gene-targeted in vitro adduction of M13 DNA on DNA template activity in vivo and in vitro.

Authors:  J S Jacobsen; M Z Humayun
Journal:  Biochemistry       Date:  1990-01-16       Impact factor: 3.162

6.  Identification of 67 histone marks and histone lysine crotonylation as a new type of histone modification.

Authors:  Minjia Tan; Hao Luo; Sangkyu Lee; Fulai Jin; Jeong Soo Yang; Emilie Montellier; Thierry Buchou; Zhongyi Cheng; Sophie Rousseaux; Nisha Rajagopal; Zhike Lu; Zhen Ye; Qin Zhu; Joanna Wysocka; Yang Ye; Saadi Khochbin; Bing Ren; Yingming Zhao
Journal:  Cell       Date:  2011-09-16       Impact factor: 41.582

7.  Evidence that humans metabolize benzene via two pathways.

Authors:  Stephen M Rappaport; Sungkyoon Kim; Qing Lan; Roel Vermeulen; Suramya Waidyanatha; Luoping Zhang; Guilan Li; Songnian Yin; Richard B Hayes; Nathaniel Rothman; Martyn T Smith
Journal:  Environ Health Perspect       Date:  2009-02-19       Impact factor: 9.031

8.  Brd4 maintains constitutively active NF-κB in cancer cells by binding to acetylated RelA.

Authors:  Z Zou; B Huang; X Wu; H Zhang; J Qi; J Bradner; S Nair; L-F Chen
Journal:  Oncogene       Date:  2013-05-20       Impact factor: 9.867

9.  Quantitative chemoproteomics for site-specific analysis of protein alkylation by 4-hydroxy-2-nonenal in cells.

Authors:  Jing Yang; Keri A Tallman; Ned A Porter; Daniel C Liebler
Journal:  Anal Chem       Date:  2015-02-09       Impact factor: 6.986

10.  A chemoproteomic platform to quantitatively map targets of lipid-derived electrophiles.

Authors:  Chu Wang; Eranthie Weerapana; Megan M Blewett; Benjamin F Cravatt
Journal:  Nat Methods       Date:  2013-12-01       Impact factor: 28.547

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  11 in total

1.  Effect of Nucleosome Assembly on Alkylation by a Dynamic Electrophile.

Authors:  Shane R Byrne; Kun Yang; Steven E Rokita
Journal:  Chem Res Toxicol       Date:  2019-03-27       Impact factor: 3.739

Review 2.  (De)Toxifying the Epigenetic Code.

Authors:  Qingfei Zheng; Nicholas A Prescott; Igor Maksimovic; Yael David
Journal:  Chem Res Toxicol       Date:  2019-03-18       Impact factor: 3.739

Review 3.  Chromatin as a key consumer in the metabolite economy.

Authors:  Katharine L Diehl; Tom W Muir
Journal:  Nat Chem Biol       Date:  2020-05-22       Impact factor: 15.040

Review 4.  The evolving metabolic landscape of chromatin biology and epigenetics.

Authors:  Ziwei Dai; Vijyendra Ramesh; Jason W Locasale
Journal:  Nat Rev Genet       Date:  2020-09-09       Impact factor: 53.242

Review 5.  Hydrogen peroxide-induced stress acclimation in plants.

Authors:  Muhammad Kamran Qureshi; Piotr Gawroński; Sana Munir; Sunita Jindal; Pavel Kerchev
Journal:  Cell Mol Life Sci       Date:  2022-02-09       Impact factor: 9.261

Review 6.  HIF1, HSF1, and NRF2: Oxidant-Responsive Trio Raising Cellular Defenses and Engaging Immune System.

Authors:  Anna M Cyran; Anatoly Zhitkovich
Journal:  Chem Res Toxicol       Date:  2022-08-10       Impact factor: 3.973

7.  Intracellular Formation of a DNA Damage-Induced, Histone Post-Translational Modification Following Bleomycin Treatment.

Authors:  Marco Paolo Jacinto; Stephen D Fried; Marc M Greenberg
Journal:  J Am Chem Soc       Date:  2022-04-25       Impact factor: 16.383

8.  An Azidoribose Probe to Track Ketoamine Adducts in Histone Ribose Glycation.

Authors:  Igor Maksimovic; Qingfei Zheng; Marissa N Trujillo; James J Galligan; Yael David
Journal:  J Am Chem Soc       Date:  2020-05-22       Impact factor: 15.419

9.  Regulation of Chromatin Assembly and Cell Transformation by Formaldehyde Exposure in Human Cells.

Authors:  Danqi Chen; Lei Fang; Shenglin Mei; Hongjie Li; Xia Xu; Thomas L Des Marais; Kun Lu; X Shirley Liu; Chunyuan Jin
Journal:  Environ Health Perspect       Date:  2017-09-21       Impact factor: 9.031

10.  Methylglyoxal-derived posttranslational arginine modifications are abundant histone marks.

Authors:  James J Galligan; James A Wepy; Matthew D Streeter; Philip J Kingsley; Michelle M Mitchener; Orrette R Wauchope; William N Beavers; Kristie L Rose; Tina Wang; David A Spiegel; Lawrence J Marnett
Journal:  Proc Natl Acad Sci U S A       Date:  2018-08-27       Impact factor: 11.205

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