Literature DB >> 24011576

Epigenetic modifications in the pathogenesis of diabetic nephropathy.

Marpadga A Reddy1, Jung Tak Park, Rama Natarajan.   

Abstract

Diabetic nephropathy (DN) is a leading cause of end-stage renal disease. Diabetic vascular complications such as DN can progress despite subsequent glycemic control, suggesting a metabolic memory of previous exposure to hyperglycemia. Diabetes profoundly impacts transcription programs in target cells through activation of multiple signaling pathways and key transcription factors leading to aberrant expression of pathologic genes. Emerging evidence suggests that these factors associated with the pathophysiology of diabetic complications and metabolic memory also might be influenced by epigenetic mechanisms in chromatin such as DNA methylation, histone lysine acetylation, and methylation. Key histone modifications and the related histone methyltransferases and acetyltransferases have been implicated in the regulation of inflammatory and profibrotic genes in renal and vascular cells under diabetic conditions. Advances in epigenome profiling approaches have provided novel insights into the chromatin states and functional outcomes in target cells affected by diabetes. Because epigenetic changes are potentially reversible, they can provide a window of opportunity for the development of much-needed new therapies for DN in the future. In this review, we discuss recent developments in the field of epigenetics and their relevance to diabetic vascular complications and DN pathogenesis.
© 2013 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Chromatin; diabetic nephropathy; epigenomics; histone modifications; metabolic memory

Mesh:

Substances:

Year:  2013        PMID: 24011576      PMCID: PMC3767931          DOI: 10.1016/j.semnephrol.2013.05.006

Source DB:  PubMed          Journal:  Semin Nephrol        ISSN: 0270-9295            Impact factor:   5.299


  97 in total

1.  Distinguishing hyperglycemic changes by Set7 in vascular endothelial cells.

Authors:  Jun Okabe; Christian Orlowski; Aneta Balcerczyk; Chris Tikellis; Merlin C Thomas; Mark E Cooper; Assam El-Osta
Journal:  Circ Res       Date:  2012-03-08       Impact factor: 17.367

Review 2.  The role of epigenetics in the pathology of diabetic complications.

Authors:  Louisa M Villeneuve; Rama Natarajan
Journal:  Am J Physiol Renal Physiol       Date:  2010-05-12

Review 3.  Histone deacetylase inhibitors: a novel class of therapeutic agents in diabetic nephropathy.

Authors:  H B Lee; H Noh; J Y Seo; M R Yu; H Ha
Journal:  Kidney Int Suppl       Date:  2007-08       Impact factor: 10.545

Review 4.  Using epigenetic mechanisms to understand the impact of common disease causing alleles.

Authors:  Amy Leung; Dustin E Schones; Rama Natarajan
Journal:  Curr Opin Immunol       Date:  2012-08-02       Impact factor: 7.486

Review 5.  DNA methylation and demethylation in mammals.

Authors:  Zhao-xia Chen; Arthur D Riggs
Journal:  J Biol Chem       Date:  2011-03-24       Impact factor: 5.157

6.  Insulin promoter DNA methylation correlates negatively with insulin gene expression and positively with HbA(1c) levels in human pancreatic islets.

Authors:  B T Yang; T A Dayeh; C L Kirkpatrick; J Taneera; R Kumar; L Groop; C B Wollheim; M D Nitert; C Ling
Journal:  Diabetologia       Date:  2010-11-23       Impact factor: 10.122

7.  ENCODE whole-genome data in the UCSC Genome Browser: update 2012.

Authors:  Kate R Rosenbloom; Timothy R Dreszer; Jeffrey C Long; Venkat S Malladi; Cricket A Sloan; Brian J Raney; Melissa S Cline; Donna Karolchik; Galt P Barber; Hiram Clawson; Mark Diekhans; Pauline A Fujita; Mary Goldman; Robert C Gravell; Rachel A Harte; Angie S Hinrichs; Vanessa M Kirkup; Robert M Kuhn; Katrina Learned; Morgan Maddren; Laurence R Meyer; Andy Pohl; Brooke Rhead; Matthew C Wong; Ann S Zweig; David Haussler; W James Kent
Journal:  Nucleic Acids Res       Date:  2011-11-09       Impact factor: 16.971

8.  Expression of the peroxisome proliferator activated receptor gamma gene is repressed by DNA methylation in visceral adipose tissue of mouse models of diabetes.

Authors:  Katsunori Fujiki; Fumi Kano; Kunio Shiota; Masayuki Murata
Journal:  BMC Biol       Date:  2009-07-10       Impact factor: 7.431

9.  An encyclopedia of mouse DNA elements (Mouse ENCODE).

Authors:  John A Stamatoyannopoulos; Michael Snyder; Ross Hardison; Bing Ren; Thomas Gingeras; David M Gilbert; Mark Groudine; Michael Bender; Rajinder Kaul; Theresa Canfield; Erica Giste; Audra Johnson; Mia Zhang; Gayathri Balasundaram; Rachel Byron; Vaughan Roach; Peter J Sabo; Richard Sandstrom; A Sandra Stehling; Robert E Thurman; Sherman M Weissman; Philip Cayting; Manoj Hariharan; Jin Lian; Yong Cheng; Stephen G Landt; Zhihai Ma; Barbara J Wold; Job Dekker; Gregory E Crawford; Cheryl A Keller; Weisheng Wu; Christopher Morrissey; Swathi A Kumar; Tejaswini Mishra; Deepti Jain; Marta Byrska-Bishop; Daniel Blankenberg; Bryan R Lajoie; Gaurav Jain; Amartya Sanyal; Kaun-Bei Chen; Olgert Denas; James Taylor; Gerd A Blobel; Mitchell J Weiss; Max Pimkin; Wulan Deng; Georgi K Marinov; Brian A Williams; Katherine I Fisher-Aylor; Gilberto Desalvo; Anthony Kiralusha; Diane Trout; Henry Amrhein; Ali Mortazavi; Lee Edsall; David McCleary; Samantha Kuan; Yin Shen; Feng Yue; Zhen Ye; Carrie A Davis; Chris Zaleski; Sonali Jha; Chenghai Xue; Alex Dobin; Wei Lin; Meagan Fastuca; Huaien Wang; Roderic Guigo; Sarah Djebali; Julien Lagarde; Tyrone Ryba; Takayo Sasaki; Venkat S Malladi; Melissa S Cline; Vanessa M Kirkup; Katrina Learned; Kate R Rosenbloom; W James Kent; Elise A Feingold; Peter J Good; Michael Pazin; Rebecca F Lowdon; Leslie B Adams
Journal:  Genome Biol       Date:  2012-08-13       Impact factor: 13.583

10.  Lymphocytes from patients with type 1 diabetes display a distinct profile of chromatin histone H3 lysine 9 dimethylation: an epigenetic study in diabetes.

Authors:  Feng Miao; David D Smith; Lingxiao Zhang; Andrew Min; Wei Feng; Rama Natarajan
Journal:  Diabetes       Date:  2008-09-05       Impact factor: 9.461

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  37 in total

1.  Epigenomic profiling reveals an association between persistence of DNA methylation and metabolic memory in the DCCT/EDIC type 1 diabetes cohort.

Authors:  Zhuo Chen; Feng Miao; Andrew D Paterson; John M Lachin; Lingxiao Zhang; Dustin E Schones; Xiwei Wu; Jinhui Wang; Joshua D Tompkins; Saul Genuth; Barbara H Braffett; Arthur D Riggs; Rama Natarajan
Journal:  Proc Natl Acad Sci U S A       Date:  2016-05-09       Impact factor: 11.205

2.  Integrative Biology of Diabetic Kidney Disease.

Authors:  Jennifer L Harder; Jeffrey B Hodgin; Matthias Kretzler
Journal:  Kidney Dis (Basel)       Date:  2015-09-23

Review 3.  Epigenetics in kidney development and renal disease.

Authors:  Gregory R Dressler; Sanjeevkumar R Patel
Journal:  Transl Res       Date:  2014-06-04       Impact factor: 7.012

4.  Long non-coding RNA Hottip modulates high-glucose-induced inflammation and ECM accumulation through miR-455-3p/WNT2B in mouse mesangial cells.

Authors:  Xiang-Jun Zhu; Zhaung Gong; Shu-Juan Li; Hai-Ping Jia; Da-Lin Li
Journal:  Int J Clin Exp Pathol       Date:  2019-07-01

Review 5.  Non-genetic mechanisms of diabetic nephropathy.

Authors:  Qiuxia Han; Hanyu Zhu; Xiangmei Chen; Zhangsuo Liu
Journal:  Front Med       Date:  2017-09-04       Impact factor: 4.592

6.  Novel Genetic Actors of Diabetes-Associated Microvascular Complications: Retinopathy, Kidney Disease and Neuropathy.

Authors:  Samaneh Davoudi; Lucia Sobrin
Journal:  Rev Diabet Stud       Date:  2016-01-25

7.  Histone Adduction and Its Functional Impact on Epigenetics.

Authors:  James J Galligan; Lawrence J Marnett
Journal:  Chem Res Toxicol       Date:  2016-12-20       Impact factor: 3.739

8.  High Glucose-Induced Hypomethylation Promotes Binding of Sp-1 to Myo-Inositol Oxygenase: Implication in the Pathobiology of Diabetic Tubulopathy.

Authors:  Isha Sharma; Rajesh K Dutta; Neel K Singh; Yashpal S Kanwar
Journal:  Am J Pathol       Date:  2017-02-14       Impact factor: 4.307

9.  Epigenetic Histone Modifications Involved in Profibrotic Gene Regulation by 12/15-Lipoxygenase and Its Oxidized Lipid Products in Diabetic Nephropathy.

Authors:  Hang Yuan; Marpadga A Reddy; Supriya Deshpande; Ye Jia; Jung Tak Park; Linda L Lanting; Wen Jin; Mitsuo Kato; Zhong Gao Xu; Sadhan Das; Rama Natarajan
Journal:  Antioxid Redox Signal       Date:  2015-11-30       Impact factor: 8.401

Review 10.  Diabetic nephropathy--emerging epigenetic mechanisms.

Authors:  Mitsuo Kato; Rama Natarajan
Journal:  Nat Rev Nephrol       Date:  2014-07-08       Impact factor: 28.314

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