Literature DB >> 27920636

Identifying CNVs in 15q11q13 and 16p11.2 of Patients with Seizures Increases the Rates of Detecting Pathogenic Changes.

Gabrielle S Vianna1, Mariana L Freitas1, Valdirene T de Oliveira1, Rafaella X Pietra1, Michele da S Gonçalves2, Patrícia P O Rocha1, Rejane A C Monteiro1, Luana C A Ferreira1, Rosana R Xavier3, Andréia M Carvalho3, Patrícia R de M Lima3, Maria Augusta N P Monteiro3, Elvis C Mateo2, Juliana G Giannetti4, Giovana da C César5, Joziele de S Lima6, Paula F V Medeiros7, Fernanda S Jehee1.   

Abstract

Chromosomal changes are frequently observed in patients with syndromic seizures. Understanding the genetic etiology of this pathology is crucial for the guidance and genetic counseling of families as well as for the establishment of appropriate treatment. A combination of MLPA kits was used to identify pathogenic CNVs in a group of 70 syndromic patients with seizures. Initially, a screening was performed for subtelomeric changes (MLPA P036 and P070 kits) and for the regions most frequently related to microdeletion/microduplication syndromes (MLPA P064). Subsequently, the MLPA P343 was used to identify alterations in the 15q11q13, 16p11.2, and 22q13 regions. Screening with MLPA P343 allowed a 10-15.7% increase in the detection rate of CNVs reinforcing the importance of investigating changes in 15q11q13 and 16p11.2 in syndromic patients with seizures. We also demonstrated that the MLPA technique is an alternative with a great diagnostic potential, and we proposed its use as part of the initial assessment of syndromic patients with seizures.

Entities:  

Keywords:  Congenital malformations; Developmental delay; Intellectual disability; MLPA; Seizures; Submicroscopic chromosomal changes

Year:  2016        PMID: 27920636      PMCID: PMC5131333          DOI: 10.1159/000450631

Source DB:  PubMed          Journal:  Mol Syndromol        ISSN: 1661-8769


  26 in total

Review 1.  Copy number variants are frequent in genetic generalized epilepsy with intellectual disability.

Authors:  Saul A Mullen; Gemma L Carvill; Susannah Bellows; Marta A Bayly; Holger Trucks; Dennis Lal; Thoman Sander; Samuel F Berkovic; Leanne M Dibbens; Ingrid E Scheffer; Heather C Mefford
Journal:  Neurology       Date:  2013-09-25       Impact factor: 9.910

2.  Chromosomal microaberrations in patients with epilepsy, intellectual disability, and congenital anomalies.

Authors:  A Spreiz; E Haberlandt; M Baumann; S Baumgartner Sigl; C Fauth; K Gautsch; D Karall; C Janetschek; K Rostasy; S Scholl-Bürgi; S Zotter; G Utermann; J Zschocke; D Kotzot
Journal:  Clin Genet       Date:  2013-10-28       Impact factor: 4.438

Review 3.  Genome arrays for the detection of copy number variations in idiopathic mental retardation, idiopathic generalized epilepsy and neuropsychiatric disorders: lessons for diagnostic workflow and research.

Authors:  R Hochstenbach; J E Buizer-Voskamp; J A S Vorstman; R A Ophoff
Journal:  Cytogenet Genome Res       Date:  2011-11-02       Impact factor: 1.636

Review 4.  Clinical significance of rare copy number variations in epilepsy: a case-control survey using microarray-based comparative genomic hybridization.

Authors:  Pasquale Striano; Antonietta Coppola; Roberta Paravidino; Michela Malacarne; Stefania Gimelli; Angela Robbiano; Monica Traverso; Marianna Pezzella; Vincenzo Belcastro; Amedeo Bianchi; Maurizio Elia; Antonio Falace; Elisabetta Gazzerro; Edoardo Ferlazzo; Elena Freri; Roberta Galasso; Giuseppe Gobbi; Cristina Molinatto; Simona Cavani; Orsetta Zuffardi; Salvatore Striano; Giovanni Battista Ferrero; Margherita Silengo; Maria Luigia Cavaliere; Matteo Benelli; Alberto Magi; Maria Piccione; Franca Dagna Bricarelli; Domenico A Coviello; Marco Fichera; Carlo Minetti; Federico Zara
Journal:  Arch Neurol       Date:  2011-11-14

Review 5.  Chromosomal abnormalities and epilepsy: a review for clinicians and gene hunters.

Authors:  Rita Singh; R J McKinlay Gardner; Kathryn M Crossland; Ingrid E Scheffer; Samuel F Berkovic
Journal:  Epilepsia       Date:  2002-02       Impact factor: 5.864

Review 6.  Epilepsy and chromosomal abnormalities.

Authors:  Giovanni Sorge; Anna Sorge
Journal:  Ital J Pediatr       Date:  2010-05-03       Impact factor: 2.638

7.  Genome-wide copy number variation in epilepsy: novel susceptibility loci in idiopathic generalized and focal epilepsies.

Authors:  Heather C Mefford; Hiltrud Muhle; Philipp Ostertag; Sarah von Spiczak; Karen Buysse; Carl Baker; Andre Franke; Alain Malafosse; Pierre Genton; Pierre Thomas; Christina A Gurnett; Stefan Schreiber; Alexander G Bassuk; Michel Guipponi; Ulrich Stephani; Ingo Helbig; Evan E Eichler
Journal:  PLoS Genet       Date:  2010-05-20       Impact factor: 5.917

8.  Array analysis and karyotyping: workflow consequences based on a retrospective study of 36,325 patients with idiopathic developmental delay in the Netherlands.

Authors:  Ron Hochstenbach; Ellen van Binsbergen; John Engelen; Aggie Nieuwint; Abeltje Polstra; Pino Poddighe; Claudia Ruivenkamp; Birgit Sikkema-Raddatz; Dominique Smeets; Martin Poot
Journal:  Eur J Med Genet       Date:  2009-04-09       Impact factor: 2.708

9.  Epilepsy and Other Neuropsychiatric Manifestations in Children and Adolescents with 22q11.2 Deletion Syndrome.

Authors:  Eun Hee Kim; Mi Sun Yum; Beom Hee Lee; Hyo Won Kim; Hyun Jeoung Lee; Gu Hwan Kim; Yun Jeong Lee; Han Wook Yoo; Tae Sung Ko
Journal:  J Clin Neurol       Date:  2016-01       Impact factor: 3.077

10.  A novel SYBR-based duplex qPCR for the detection of gene dosage: detection of an APC large deletion in a familial adenomatous polyposis patient with an unusual phenotype.

Authors:  Giovana Tardin Torrezan; Felipe Cavalcanti Carneiro da Silva; Ana Cristina Victorino Krepischi; Erika Maria Monteiro dos Santos; Benedito Mauro Rossi; Dirce Maria Carraro
Journal:  BMC Med Genet       Date:  2012-07-16       Impact factor: 2.103

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