Literature DB >> 27912044

Mutations in PROSC Disrupt Cellular Pyridoxal Phosphate Homeostasis and Cause Vitamin-B6-Dependent Epilepsy.

Niklas Darin1, Emma Reid2, Laurence Prunetti3, Lena Samuelsson4, Ralf A Husain5, Matthew Wilson2, Basma El Yacoubi3, Emma Footitt6, W K Chong7, Louise C Wilson8, Helen Prunty9, Simon Pope10, Simon Heales11, Karine Lascelles12, Mike Champion13, Evangeline Wassmer14, Pierangelo Veggiotti15, Valérie de Crécy-Lagard3, Philippa B Mills16, Peter T Clayton17.   

Abstract

Pyridoxal 5'-phosphate (PLP), the active form of vitamin B6, functions as a cofactor in humans for more than 140 enzymes, many of which are involved in neurotransmitter synthesis and degradation. A deficiency of PLP can present, therefore, as seizures and other symptoms that are treatable with PLP and/or pyridoxine. Deficiency of PLP in the brain can be caused by inborn errors affecting B6 vitamer metabolism or by inactivation of PLP, which can occur when compounds accumulate as a result of inborn errors of other pathways or when small molecules are ingested. Whole-exome sequencing of two children from a consanguineous family with pyridoxine-dependent epilepsy revealed a homozygous nonsense mutation in proline synthetase co-transcribed homolog (bacterial), PROSC, which encodes a PLP-binding protein of hitherto unknown function. Subsequent sequencing of 29 unrelated indivduals with pyridoxine-responsive epilepsy identified four additional children with biallelic PROSC mutations. Pre-treatment cerebrospinal fluid samples showed low PLP concentrations and evidence of reduced activity of PLP-dependent enzymes. However, cultured fibroblasts showed excessive PLP accumulation. An E.coli mutant lacking the PROSC homolog (ΔYggS) is pyridoxine sensitive; complementation with human PROSC restored growth whereas hPROSC encoding p.Leu175Pro, p.Arg241Gln, and p.Ser78Ter did not. PLP, a highly reactive aldehyde, poses a problem for cells, which is how to supply enough PLP for apoenzymes while maintaining free PLP concentrations low enough to avoid unwanted reactions with other important cellular nucleophiles. Although the mechanism involved is not fully understood, our studies suggest that PROSC is involved in intracellular homeostatic regulation of PLP, supplying this cofactor to apoenzymes while minimizing any toxic side reactions. Copyright Â
© 2016 American Society of Human Genetics. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  PROSC; YggS; developmental delay; epilepsy; homeostasis; microcephaly; pyridoxal 5’-phosphate; pyridoxine; treatment; vitamin B6

Mesh:

Substances:

Year:  2016        PMID: 27912044      PMCID: PMC5142116          DOI: 10.1016/j.ajhg.2016.10.011

Source DB:  PubMed          Journal:  Am J Hum Genet        ISSN: 0002-9297            Impact factor:   11.025


  37 in total

1.  Evidence that COG0325 proteins are involved in PLP homeostasis.

Authors:  Laurence Prunetti; Basma El Yacoubi; Cara R Schiavon; Ericka Kirkpatrick; Lili Huang; Marc Bailly; Mona El Badawi-Sidhu; Katherine Harrison; Jesse F Gregory; Oliver Fiehn; Andrew D Hanson; Valérie de Crécy-Lagard
Journal:  Microbiology       Date:  2016-04       Impact factor: 2.777

Review 2.  Vitamin B(6) salvage enzymes: mechanism, structure and regulation.

Authors:  Martino Luigi di Salvo; Roberto Contestabile; Martin K Safo
Journal:  Biochim Biophys Acta       Date:  2010-12-20

3.  Vitamin B6 vitamer concentrations in cerebrospinal fluid differ between preterm and term newborn infants.

Authors:  Monique Albersen; Floris Groenendaal; Maria van der Ham; Tom J de Koning; Marjolein Bosma; Wouter F Visser; Gepke Visser; Monique G M de Sain-van der Velden; Nanda M Verhoeven-Duif
Journal:  Pediatrics       Date:  2012-06-25       Impact factor: 7.124

4.  Urinary dopamine in aromatic L-amino acid decarboxylase deficiency: the unsolved paradox.

Authors:  T Wassenberg; M A A P Willemsen; P B H Geurtz; M Lammens; K Verrijp; M Wilmer; W T Lee; R A Wevers; M M Verbeek
Journal:  Mol Genet Metab       Date:  2010-08-14       Impact factor: 4.797

5.  Structure of Escherichia coli pyridoxine 5'-phosphate oxidase in a tetragonal crystal form: insights into the mechanistic pathway of the enzyme.

Authors:  Martin K Safo; Faik N Musayev; Verne Schirch
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-04-20

6.  Aldehyde stress-mediated novel modification of proteins: epimerization of the N-terminal amino acid.

Authors:  Ryo Kajita; Takaaki Goto; Seon Hwa Lee; Tomoyuki Oe
Journal:  Chem Res Toxicol       Date:  2013-12-03       Impact factor: 3.739

7.  Effect of binding to hemoglobin and albumin on pyridoxal transport and metabolism.

Authors:  S L Ink; L M Henderson
Journal:  J Biol Chem       Date:  1984-05-10       Impact factor: 5.157

Review 8.  Pyridoxine-Dependent Epilepsy: An Expanding Clinical Spectrum.

Authors:  Clara D M van Karnebeek; Sylvia A Tiebout; Jikkemien Niermeijer; Bwee Tien Poll-The; Aisha Ghani; Curtis R Coughlin; Johan L K Van Hove; Jost Wigand Richter; Hans Juergen Christen; Renata Gallagher; Hans Hartmann; Sylvia Stockler-Ipsiroglu
Journal:  Pediatr Neurol       Date:  2016-01-11       Impact factor: 3.372

9.  Structure of a yeast hypothetical protein selected by a structural genomics approach.

Authors:  S Eswaramoorthy; S Gerchman; V Graziano; H Kycia; F W Studier; S Swaminathan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-12-19

10.  Normal Neurodevelopmental Outcomes in PNPO Deficiency: A Case Series and Literature Review.

Authors:  J Hatch; D Coman; P Clayton; P Mills; S Calvert; R I Webster; Kate Riney
Journal:  JIMD Rep       Date:  2015-08-25
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  41 in total

1.  Vitamin B6 is essential for serine de novo biosynthesis.

Authors:  Rúben J Ramos; Mia L Pras-Raves; Johan Gerrits; Maria van der Ham; Marcel Willemsen; Hubertus Prinsen; Boudewijn Burgering; Judith J Jans; Nanda M Verhoeven-Duif
Journal:  J Inherit Metab Dis       Date:  2017-08-11       Impact factor: 4.982

2.  Pyridoxine-dependent epilepsies: an observational study on clinical, diagnostic, therapeutic and prognostic features in a pediatric cohort.

Authors:  Raffaele Falsaperla; Maria Stella Vari; Irene Toldo; Alessandra Murgia; Stefano Sartori; Marilena Vecchi; Agnese Suppiej; Alberto Burlina; Mario Mastrangelo; Vincenzo Leuzzi; Valentina Marchiani; Paola De Liso; Giuseppe Capovilla; Pasquale Striano; Giovanna Vitaliti
Journal:  Metab Brain Dis       Date:  2017-11-25       Impact factor: 3.584

3.  The Role of YggS in Vitamin B6 Homeostasis in Salmonella enterica Is Informed by Heterologous Expression of Yeast SNZ3.

Authors:  Huong N Vu; Tomokazu Ito; Diana M Downs
Journal:  J Bacteriol       Date:  2020-10-22       Impact factor: 3.490

4.  Allosteric feedback inhibition of pyridoxine 5'-phosphate oxidase from Escherichia coli.

Authors:  Anna Barile; Angela Tramonti; Martino Luigi di Salvo; Isabel Nogués; Caterina Nardella; Francesco Malatesta; Roberto Contestabile
Journal:  J Biol Chem       Date:  2019-09-04       Impact factor: 5.157

5.  Excessive Seizure Clusters in an Otherwise Well-Controlled Epilepsy as a Possible Hallmark of Untreated Vitamin B6-Responsive Epilepsy due to a Homozygous PLPBP Missense Variant.

Authors:  Jessika Johannsen; Tatjana Bierhals; Philipp Deindl; Laura Hecher; Katharina Hermann; Maja Hempel; Katja Kloth; Jonas Denecke
Journal:  J Pediatr Genet       Date:  2019-04-20

Review 6.  Treatable Genetic Metabolic Epilepsies.

Authors:  Lama Assi; Youssef Saklawi; Pascale E Karam; Makram Obeid
Journal:  Curr Treat Options Neurol       Date:  2017-09       Impact factor: 3.598

7.  Conserved Pyridoxal 5'-Phosphate-Binding Protein YggS Impacts Amino Acid Metabolism through Pyridoxine 5'-Phosphate in Escherichia coli.

Authors:  Tomokazu Ito; Kana Yamamoto; Ran Hori; Ayako Yamauchi; Diana M Downs; Hisashi Hemmi; Tohru Yoshimura
Journal:  Appl Environ Microbiol       Date:  2019-05-16       Impact factor: 4.792

Review 8.  Contemporary scope of inborn errors of metabolism involving epilepsy or seizures.

Authors:  Birutė Tumienė; Borut Peterlin; Aleš Maver; Algirdas Utkus
Journal:  Metab Brain Dis       Date:  2018-07-13       Impact factor: 3.584

Review 9.  The genotypic spectrum of ALDH7A1 mutations resulting in pyridoxine dependent epilepsy: A common epileptic encephalopathy.

Authors:  Curtis R Coughlin; Michael A Swanson; Elaine Spector; Naomi J L Meeks; Kathryn E Kronquist; Mezhgan Aslamy; Michael F Wempe; Clara D M van Karnebeek; Sidney M Gospe; Verena G Aziz; Becky P Tsai; Hanlin Gao; Peter L Nagy; Keith Hyland; Silvy J M van Dooren; Gajja S Salomons; Johan L K Van Hove
Journal:  J Inherit Metab Dis       Date:  2019-02-22       Impact factor: 4.982

10.  Inhibition of glycine cleavage system by pyridoxine 5'-phosphate causes synthetic lethality in glyA yggS and serA yggS in Escherichia coli.

Authors:  Tomokazu Ito; Ran Hori; Hisashi Hemmi; Diana M Downs; Tohru Yoshimura
Journal:  Mol Microbiol       Date:  2019-11-24       Impact factor: 3.501

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