Literature DB >> 27902243

Rugosibacter aromaticivorans gen. nov., sp. nov., a bacterium within the family Rhodocyclaceae, isolated from contaminated soil, capable of degrading aromatic compounds.

Elizabeth M Corteselli1, Michael D Aitken1, David R Singleton1.   

Abstract

A bacterial strain designated Ca6T was isolated from polycyclic aromatic hydrocarbon (PAH)-contaminated soil from the site of a former manufactured gas plant in Charlotte, NC, USA, and linked phylogenetically to the family Rhodocyclaceae of the class Betaproteobacteria. Its 16S rRNA gene sequence was highly similar to globally distributed environmental sequences, including those previously designated 'Pyrene Group 1' demonstrated to grow on the PAHs phenanthrene and pyrene by stable-isotope probing. The most closely related described relative was Sulfuritalea hydrogenivorans strain sk43HT (93.6 % 16S rRNA gene sequence identity). In addition to a limited number of organic acids, Ca6T was capable of growth on the monoaromatic compounds benzene and toluene, and the azaarene carbazole, as sole sources of carbon and energy. Growth on the PAHs phenanthrene and pyrene was also confirmed. Optimal growth was observed aerobically under mesophilic temperature, neutral pH and low salinity conditions. Major fatty acids present included summed feature 3 (C16 : 1ω7c or C16 : 1ω6c) and C16 : 0. The DNA G+C content of the single chromosome was 55.14  mol% as determined by complete genome sequencing. Due to its distinct genetic and physiological properties, strain Ca6T is proposed as a member of a novel genus and species within the family Rhodocyclaceae, for which the name Rugosibacter aromaticivorans gen. nov., sp. nov. is proposed. The type strain of the species is Ca6T (=ATCC TSD-59T=DSM 103039T).

Entities:  

Mesh:

Substances:

Year:  2017        PMID: 27902243      PMCID: PMC5797942          DOI: 10.1099/ijsem.0.001622

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  29 in total

1.  DNA-DNA hybridization values and their relationship to whole-genome sequence similarities.

Authors:  Johan Goris; Konstantinos T Konstantinidis; Joel A Klappenbach; Tom Coenye; Peter Vandamme; James M Tiedje
Journal:  Int J Syst Evol Microbiol       Date:  2007-01       Impact factor: 2.747

2.  Heterologous expression of polycyclic aromatic hydrocarbon ring-hydroxylating dioxygenase genes from a novel pyrene-degrading betaproteobacterium.

Authors:  David R Singleton; Jing Hu; Michael D Aitken
Journal:  Appl Environ Microbiol       Date:  2012-03-16       Impact factor: 4.792

3.  Impacts of different salinities on bacterial biofilm communities in fresh water.

Authors:  Lei Zhang; Guang Gao; Xiangming Tang; Keqiang Shao
Journal:  Can J Microbiol       Date:  2014-04-04       Impact factor: 2.419

4.  Recovery of phenanthrene-degrading bacteria after simulated in situ persulfate oxidation in contaminated soil.

Authors:  Stephen D Richardson; Benjamin L Lebron; Cass T Miller; Michael D Aitken
Journal:  Environ Sci Technol       Date:  2010-12-16       Impact factor: 9.028

5.  Identification and quantification of uncultivated Proteobacteria associated with pyrene degradation in a bioreactor treating PAH-contaminated soil.

Authors:  David R Singleton; Ramiah Sangaiah; Avram Gold; Louise M Ball; Michael D Aitken
Journal:  Environ Microbiol       Date:  2006-10       Impact factor: 5.491

6.  Microbial community structure and trichloroethylene degradation in groundwater.

Authors:  J A Humphries; A M H Ashe; J A Smiley; C G Johnston
Journal:  Can J Microbiol       Date:  2005-06       Impact factor: 2.419

7.  Methyloversatilis thermotolerans sp. nov., a novel thermotolerant facultative methylotroph isolated from a hot spring.

Authors:  Nina V Doronina; Elena N Kaparullina; Yuri A Trotsenko
Journal:  Int J Syst Evol Microbiol       Date:  2013-09-18       Impact factor: 2.747

8.  A rapid and easy method for the detection of microbial cellulases on agar plates using gram's iodine.

Authors:  Ramesh Chand Kasana; Richa Salwan; Hena Dhar; Som Dutt; Arvind Gulati
Journal:  Curr Microbiol       Date:  2008-09-23       Impact factor: 2.188

9.  Characterization of a polycyclic aromatic hydrocarbon degradation gene cluster in a phenanthrene-degrading Acidovorax strain.

Authors:  David R Singleton; Liza Guzmán Ramirez; Michael D Aitken
Journal:  Appl Environ Microbiol       Date:  2009-03-06       Impact factor: 4.792

10.  Complete Genome Sequence of a Novel Bacterium within the Family Rhodocyclaceae That Degrades Polycyclic Aromatic Hydrocarbons.

Authors:  David R Singleton; Allison N Dickey; Elizabeth H Scholl; Fred A Wright; Michael D Aitken
Journal:  Genome Announc       Date:  2015-04-09
View more
  7 in total

1.  Description of Immundisolibacter cernigliae gen. nov., sp. nov., a high-molecular-weight polycyclic aromatic hydrocarbon-degrading bacterium within the class Gammaproteobacteria, and proposal of Immundisolibacterales ord. nov. and Immundisolibacteraceae fam. nov.

Authors:  Elizabeth M Corteselli; Michael D Aitken; David R Singleton
Journal:  Int J Syst Evol Microbiol       Date:  2017-05-05       Impact factor: 2.747

2.  Identifying bioaugmentation candidates for bioremediation of polycyclic aromatic hydrocarbons in contaminated estuarine sediment of the Elizabeth River, VA, USA.

Authors:  Savannah J Volkoff; Daniel L Rodriguez; David R Singleton; Alexander W McCumber; Michael D Aitken; Jill R Stewart; Claudia K Gunsch
Journal:  Appl Microbiol Biotechnol       Date:  2022-01-28       Impact factor: 4.813

3.  Sulfuricystis multivorans gen. nov., sp. nov. and Sulfuricystis thermophila sp. nov., facultatively autotropic sulfur-oxidizing bacteria isolated from a hot spring, and emended description of the genus Rugosibacter.

Authors:  Hisaya Kojima; Miho Watanabe; Naoyuki Miyata; Manabu Fukui
Journal:  Arch Microbiol       Date:  2022-09-02       Impact factor: 2.667

4.  Metagenome Assembly and Metagenome-Assembled Genome Sequences from a Historical Oil Field Located in Wietze, Germany.

Authors:  Michael O Eze; Stephan A Lütgert; Hannes Neubauer; Angeliki Balouri; Alina A Kraft; Anja Sieven; Rolf Daniel; Bernd Wemheuer
Journal:  Microbiol Resour Announc       Date:  2020-05-21

5.  Stable isotope probing of hypoxic toluene degradation at the Siklós aquifer reveals prominent role of Rhodocyclaceae.

Authors:  András Táncsics; Anna Róza Szalay; Milan Farkas; Tibor Benedek; Sándor Szoboszlay; István Szabó; Tillmann Lueders
Journal:  FEMS Microbiol Ecol       Date:  2018-06-01       Impact factor: 4.194

6.  Microbiomes in a manganese oxide producing ecosystem in the Ytterby mine, Sweden: impact on metal mobility.

Authors:  Susanne Sjöberg; Courtney W Stairs; Bert Allard; Felix Homa; Tom Martin; Viktor Sjöberg; Thijs J G Ettema; Christophe Dupraz
Journal:  FEMS Microbiol Ecol       Date:  2020-10-28       Impact factor: 4.194

7.  Novel clades of soil biphenyl degraders revealed by integrating isotope probing, multi-omics, and single-cell analyses.

Authors:  Song-Can Chen; Rohit Budhraja; Lorenz Adrian; Federica Calabrese; Hryhoriy Stryhanyuk; Niculina Musat; Hans-Hermann Richnow; Gui-Lan Duan; Yong-Guan Zhu; Florin Musat
Journal:  ISME J       Date:  2021-06-11       Impact factor: 10.302

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.