Literature DB >> 27926817

Description of Immundisolibacter cernigliae gen. nov., sp. nov., a high-molecular-weight polycyclic aromatic hydrocarbon-degrading bacterium within the class Gammaproteobacteria, and proposal of Immundisolibacterales ord. nov. and Immundisolibacteraceae fam. nov.

Elizabeth M Corteselli1, Michael D Aitken1, David R Singleton1.   

Abstract

The bacterial strain TR3.2T was isolated from aerobic bioreactor-treated soil from a polycyclic aromatic hydrocarbon (PAH)-contaminated site in Salisbury, NC, USA. Strain TR3.2T was identified as a member of 'Pyrene Group 2' or 'PG2', a previously uncultivated cluster of organisms associated with the degradation of high-molecular-weight PAHs by stable-isotope probing. Based on its 16S rRNA gene sequence, the strain was classified as a member of the class Gammaproteobacteria but possessed only 90.5 % gene identity to its closest described relative, Methylococcus capsulatus strain Bath. Strain TR3.2T grew on the PAHs pyrene, phenanthrene, anthracene, benz[a]anthracene and fluorene, as well as the azaarene carbazole, and could additionally metabolize a limited number of organic acids. Optimal growth occurred aerobically under mesophilic temperature, neutral pH and low salinity conditions. Strain TR3.2T was catalase and oxidase positive. Predominant fatty acids were C17 : 0 cyclo and C16 : 0. Genomic G+C content of the single chromosome was 67.79 mol% as determined by complete genome sequencing. Due to the high sequence divergence from any cultivated species and its unique physiological properties compared to its closest relatives, strain TR3.2T is proposed as a representative of a novel order, family, genus and species within the class Gammaproteobacteria, for which the name Immundisolibacter cernigliae gen. nov., sp. nov. is proposed. The associated order and family are therefore proposed as Immundisolibacteralesord. nov. and Immundisolibacteraceaefam. nov. The type strain of the species is TR3.2T (=ATCC TSD-58T=DSM 103040T).

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Year:  2017        PMID: 27926817      PMCID: PMC5817195          DOI: 10.1099/ijsem.0.001714

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  39 in total

1.  How a bacterial community originating from a contaminated coastal sediment responds to an oil input.

Authors:  Sandrine Païssé; Marisol Goñi-Urriza; Frédéric Coulon; Robert Duran
Journal:  Microb Ecol       Date:  2010-07-22       Impact factor: 4.552

2.  Comparison of archaeal and bacterial community structures in heavily oil-contaminated and pristine soils.

Authors:  Ruyin Liu; Yu Zhang; Ran Ding; Dong Li; Yingxin Gao; Min Yang
Journal:  J Biosci Bioeng       Date:  2009-11       Impact factor: 2.894

3.  Stable-isotope probing of the polycyclic aromatic hydrocarbon-degrading bacterial guild in a contaminated soil.

Authors:  Maiysha D Jones; Douglas W Crandell; David R Singleton; Michael D Aitken
Journal:  Environ Microbiol       Date:  2011-05-12       Impact factor: 5.491

4.  Sedimenticola selenatireducens, gen. nov., sp. nov., an anaerobic selenate-respiring bacterium isolated from estuarine sediment.

Authors:  Priya Narasingarao; Max M Häggblom
Journal:  Syst Appl Microbiol       Date:  2006-01-20       Impact factor: 4.022

5.  Bioaugmentation and adsorption treatment of coking wastewater containing pyridine and quinoline using zeolite-biological aerated filters.

Authors:  Yaohui Bai; Qinghua Sun; Renhua Sun; Donghui Wen; Xiaoyan Tang
Journal:  Environ Sci Technol       Date:  2011-02-03       Impact factor: 9.028

6.  Characterization of a polycyclic aromatic hydrocarbon degradation gene cluster in a phenanthrene-degrading Acidovorax strain.

Authors:  David R Singleton; Liza Guzmán Ramirez; Michael D Aitken
Journal:  Appl Environ Microbiol       Date:  2009-03-06       Impact factor: 4.792

7.  Effect of incubation conditions on the enrichment of pyrene-degrading bacteria identified by stable-isotope probing in an aged, PAH-contaminated soil.

Authors:  Maiysha D Jones; David R Singleton; Darryl P Carstensen; Sabrina N Powell; Julie S Swanson; Frederic K Pfaender; Michael D Aitken
Journal:  Microb Ecol       Date:  2007-12-29       Impact factor: 4.552

8.  Key high molecular weight PAH-degrading bacteria in a soil consortium enriched using a sand-in-liquid microcosm system.

Authors:  Margalida Tauler; Joaquim Vila; José María Nieto; Magdalena Grifoll
Journal:  Appl Microbiol Biotechnol       Date:  2015-12-05       Impact factor: 4.813

9.  Biostimulation induces syntrophic interactions that impact C, S and N cycling in a sediment microbial community.

Authors:  Kim M Handley; Nathan C VerBerkmoes; Carl I Steefel; Kenneth H Williams; Itai Sharon; Christopher S Miller; Kyle R Frischkorn; Karuna Chourey; Brian C Thomas; Manesh B Shah; Philip E Long; Robert L Hettich; Jillian F Banfield
Journal:  ISME J       Date:  2012-11-29       Impact factor: 10.302

10.  Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data.

Authors:  Matthew Kearse; Richard Moir; Amy Wilson; Steven Stones-Havas; Matthew Cheung; Shane Sturrock; Simon Buxton; Alex Cooper; Sidney Markowitz; Chris Duran; Tobias Thierer; Bruce Ashton; Peter Meintjes; Alexei Drummond
Journal:  Bioinformatics       Date:  2012-04-27       Impact factor: 6.937

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  11 in total

1.  Identifying bioaugmentation candidates for bioremediation of polycyclic aromatic hydrocarbons in contaminated estuarine sediment of the Elizabeth River, VA, USA.

Authors:  Savannah J Volkoff; Daniel L Rodriguez; David R Singleton; Alexander W McCumber; Michael D Aitken; Jill R Stewart; Claudia K Gunsch
Journal:  Appl Microbiol Biotechnol       Date:  2022-01-28       Impact factor: 4.813

2.  Bioprospecting for Genes Encoding Hydrocarbon-Degrading Enzymes from Metagenomic Samples Isolated from 
Northern Adriatic Sea Sediments.

Authors:  Ranko Gacesa; Damir Baranasic; Antonio Starcevic; Janko Diminic; Marino Korlević; Mirjana Najdek; Maria Blažina; Davor Oršolić; Domagoj Kolesarić; Paul F Long; John Cullum; Daslav Hranueli; Sandi Orlic; Jurica Zucko
Journal:  Food Technol Biotechnol       Date:  2018-06       Impact factor: 3.918

3.  Hydrocarbon Removal by Two Differently Developed Microbial Inoculants and Comparing Their Actions with Biostimulation Treatment.

Authors:  Joanna Brzeszcz; Piotr Kapusta; Teresa Steliga; Anna Turkiewicz
Journal:  Molecules       Date:  2020-02-04       Impact factor: 4.411

4.  Food or just a free ride? A meta-analysis reveals the global diversity of the Plastisphere.

Authors:  Robyn J Wright; Morgan G I Langille; Tony R Walker
Journal:  ISME J       Date:  2020-11-02       Impact factor: 10.302

5.  Distinct microbial community along the chronic oil pollution continuum of the Persian Gulf converge with oil spill accidents.

Authors:  Maryam Rezaei Somee; Seyed Mohammad Mehdi Dastgheib; Mahmoud Shavandi; Leila Ghanbari Maman; Kaveh Kavousi; Mohammad Ali Amoozegar; Maliheh Mehrshad
Journal:  Sci Rep       Date:  2021-05-31       Impact factor: 4.379

6.  Seasonal Dynamics of Bacterial Community Structure in Diesel Oil-Contaminated Soil Cultivated with Tall Fescue (Festuca arundinacea).

Authors:  Yun-Yeong Lee; Soo Yeon Lee; Sang Don Lee; Kyung-Suk Cho
Journal:  Int J Environ Res Public Health       Date:  2022-04-12       Impact factor: 4.614

7.  Taxonomic and functional trait-based approaches suggest that aerobic and anaerobic soil microorganisms allow the natural attenuation of oil from natural seeps.

Authors:  Aurélie Cébron; Adrien Borreca; Thierry Beguiristain; Coralie Biache; Pierre Faure
Journal:  Sci Rep       Date:  2022-05-04       Impact factor: 4.996

8.  In situ microcosms deployed at the coast of British Columbia (Canada) to study dilbit weathering and associated microbial communities under marine conditions.

Authors:  Lars Schreiber; Nathalie Fortin; Julien Tremblay; Jessica Wasserscheid; Sylvie Sanschagrin; Jennifer Mason; Cynthia A Wright; David Spear; Sophia C Johannessen; Brian Robinson; Thomas King; Kenneth Lee; Charles W Greer
Journal:  FEMS Microbiol Ecol       Date:  2021-06-18       Impact factor: 4.194

9.  Effect of Co-contamination by PAHs and Heavy Metals on Bacterial Communities of Diesel Contaminated Soils of South Shetland Islands, Antarctica.

Authors:  Alejandro Gran-Scheuch; Javiera Ramos-Zuñiga; Edwar Fuentes; Denisse Bravo; José M Pérez-Donoso
Journal:  Microorganisms       Date:  2020-11-07

10.  Microbiomes in a manganese oxide producing ecosystem in the Ytterby mine, Sweden: impact on metal mobility.

Authors:  Susanne Sjöberg; Courtney W Stairs; Bert Allard; Felix Homa; Tom Martin; Viktor Sjöberg; Thijs J G Ettema; Christophe Dupraz
Journal:  FEMS Microbiol Ecol       Date:  2020-10-28       Impact factor: 4.194

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