Literature DB >> 2790133

Absolute absorption spectra of batho- and photorhodopsins at room temperature. Picosecond laser photolysis of rhodopsin in polyacrylamide.

H Kandori1, Y Shichida, T Yoshizawa.   

Abstract

Picosecond laser photolysis of rhodopsin in 15% polyacrylamide gel was performed for estimating absolute absorption spectra of the primary intermediates of cattle rhodopsin (bathorhodopsin and photorhodopsin). Using a rhodopsin digitonin extract embedded in 15% polyacrylamide gel, a precise percentage of bleaching of rhodopsin after excitation of a picosecond laser pulse was measured. Using this value, the absolute absorption spectrum of bathorhodopsin was calculated from the spectral change before and 1 ns after the picosecond laser excitation (corresponding to the difference spectrum between rhodopsin and bathorhodopsin). The absorption spectrum of bathorhodopsin thus obtained displayed a lambda max at 535 nm, which was shorter than that at low temperature (543 nm) and a half band-width broader than that measured at low temperature. The oscillator strength of bathorhodopsin at room temperature was smaller than that at low temperature. The absolute absorption spectrum of photorhodopsin was also estimated from the difference spectrum measured at 15 ps after the excitation of rhodopsin (Shichida, Y., S. Matuoka, and T. Yoshizawa. 1984. Photobiochem. Photobiophys. 7:221-228), assuming a sequential conversion of photorhodopsin to bathorhodopsin. Its lambda max was located at approximately 570 nm, and the oscillator strength was smaller than those of rhodopsin and bathorhodopsin.

Entities:  

Mesh:

Substances:

Year:  1989        PMID: 2790133      PMCID: PMC1280498          DOI: 10.1016/S0006-3495(89)82692-X

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  18 in total

1.  Formation and decay of prelumirhodopsin at room temperatures.

Authors:  G E Busch; M L Applebury; A A Lamola; P M Rentzepis
Journal:  Proc Natl Acad Sci U S A       Date:  1972-10       Impact factor: 11.205

2.  Formation of hypsorhodopsin at room temperature by picosecond green pulse.

Authors:  S Matuoka; Y Shichida; T Yoshizawa
Journal:  Biochim Biophys Acta       Date:  1984-04-26

3.  Assignment and interpretation of hydrogen out-of-plane vibrations in the resonance Raman spectra of rhodopsin and bathorhodopsin.

Authors:  G Eyring; B Curry; A Broek; J Lugtenburg; R Mathies
Journal:  Biochemistry       Date:  1982-01-19       Impact factor: 3.162

Review 4.  Photophysics of light transduction in rhodopsin and bacteriorhodopsin.

Authors:  R R Birge
Journal:  Annu Rev Biophys Bioeng       Date:  1981

5.  The formation of two forms of bathorhodopsin and their optical properties.

Authors:  N Sasaki; F Tokunaga; T Yoshizawa
Journal:  Photochem Photobiol       Date:  1980-10       Impact factor: 3.421

6.  Circular dichroism of cattle rhodopsin and bathorhodopsin at liquid nitrogen temperatures.

Authors:  S Horiuchi; F Tokunaga; T Yoshizawa
Journal:  Biochim Biophys Acta       Date:  1980-07-08

7.  Energy uptake in the first step of visual excitation.

Authors:  A Cooper
Journal:  Nature       Date:  1979-11-29       Impact factor: 49.962

8.  Temperature and wavelength effects on the photochemistry of rhodopsin, isorhodopsin, bacteriorhodopsin and their photoproducts.

Authors:  J B Hurley; T G Ebrey; B Honig; M Ottolenghi
Journal:  Nature       Date:  1977-12-08       Impact factor: 49.962

9.  Bathorhodopsin intermediates from 11-cis-rhodopsin and 9-cis-rhodopsin.

Authors:  J D Spalink; A H Reynolds; P M Rentzepis; W Sperling; M L Applebury
Journal:  Proc Natl Acad Sci U S A       Date:  1983-04       Impact factor: 11.205

10.  Studies on structure and function of rhodopsin by use of cyclopentatrienylidene 11-cis-locked-rhodopsin.

Authors:  Y Fukada; Y Shichida; T Yoshizawa; M Ito; A Kodama; K Tsukida
Journal:  Biochemistry       Date:  1984-11-20       Impact factor: 3.162

View more
  9 in total

1.  The molecular basis for the high photosensitivity of rhodopsin.

Authors:  Robert S H Liu; Leticia U Colmenares
Journal:  Proc Natl Acad Sci U S A       Date:  2003-12-01       Impact factor: 11.205

2.  Bathoiodopsin, a primary intermediate of iodopsin at physiological temperature.

Authors:  H Kandori; T Mizukami; T Okada; Y Imamoto; Y Fukada; Y Shichida; T Yoshizawa
Journal:  Proc Natl Acad Sci U S A       Date:  1990-11       Impact factor: 11.205

3.  Resonance Raman Structural Evidence that the Cis-to-Trans Isomerization in Rhodopsin Occurs in Femtoseconds.

Authors:  J E Kim; D W McCamant; L Zhu; R A Mathies
Journal:  J Phys Chem B       Date:  2001-02-15       Impact factor: 2.991

Review 4.  Activation of G protein-coupled receptors: beyond two-state models and tertiary conformational changes.

Authors:  Paul S-H Park; David T Lodowski; Krzysztof Palczewski
Journal:  Annu Rev Pharmacol Toxicol       Date:  2008       Impact factor: 13.820

5.  Bathorhodopsin structure in the room-temperature rhodopsin photosequence: picosecond time-resolved coherent anti-Stokes Raman scattering.

Authors:  A Popp; L Ujj; G H Atkinson
Journal:  Proc Natl Acad Sci U S A       Date:  1996-01-09       Impact factor: 11.205

6.  Chromophore structure in lumirhodopsin and metarhodopsin I by time-resolved resonance Raman microchip spectroscopy.

Authors:  D Pan; R A Mathies
Journal:  Biochemistry       Date:  2001-07-03       Impact factor: 3.162

7.  Time-resolved resonance Raman analysis of chromophore structural changes in the formation and decay of rhodopsin's BSI intermediate.

Authors:  Duohai Pan; Ziad Ganim; Judy E Kim; Michiel A Verhoeven; Johan Lugtenburg; Richard A Mathies
Journal:  J Am Chem Soc       Date:  2002-05-01       Impact factor: 15.419

8.  QM/MM study of the structure, energy storage, and origin of the bathochromic shift in vertebrate and invertebrate bathorhodopsins.

Authors:  Sivakumar Sekharan; Keiji Morokuma
Journal:  J Am Chem Soc       Date:  2011-03-10       Impact factor: 15.419

9.  Photoisomerization mechanism of the rhodopsin chromophore: picosecond photolysis of pigment containing 11-cis-locked eight-membered ring retinal.

Authors:  T Mizukami; H Kandori; Y Shichida; A H Chen; F Derguini; C G Caldwell; C F Biffe; K Nakanishi; T Yoshizawa
Journal:  Proc Natl Acad Sci U S A       Date:  1993-05-01       Impact factor: 11.205

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.