Literature DB >> 27891540

Advancement of mass spectrometry-based proteomics technologies to explore triple negative breast cancer.

Sayem Miah1, Charles A S Banks2, Mark K Adams2, Laurence Florens2, Kiven E Lukong3, Michael P Washburn4.   

Abstract

Understanding the complexity of cancer biology requires extensive information about the cancer proteome over the course of the disease. The recent advances in mass spectrometry-based proteomics technologies have led to the accumulation of an incredible amount of such proteomic information. This information allows us to identify protein signatures or protein biomarkers, which can be used to improve cancer diagnosis, prognosis and treatment. For example, mass spectrometry-based proteomics has been used in breast cancer research for over two decades to elucidate protein function. Breast cancer is a heterogeneous group of diseases with distinct molecular features that are reflected in tumour characteristics and clinical outcomes. Compared with all other subtypes of breast cancer, triple-negative breast cancer is perhaps the most distinct in nature and heterogeneity. In this review, we provide an introductory overview of the application of advanced proteomic technologies to triple-negative breast cancer research.

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Year:  2016        PMID: 27891540      PMCID: PMC5173390          DOI: 10.1039/c6mb00639f

Source DB:  PubMed          Journal:  Mol Biosyst        ISSN: 1742-2051


  106 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  1999-06-08       Impact factor: 11.205

Review 2.  Practical implications of gene-expression-based assays for breast oncologists.

Authors:  Aleix Prat; Matthew J Ellis; Charles M Perou
Journal:  Nat Rev Clin Oncol       Date:  2011-12-06       Impact factor: 66.675

3.  Systematic comparison of label-free, metabolic labeling, and isobaric chemical labeling for quantitative proteomics on LTQ Orbitrap Velos.

Authors:  Zhou Li; Rachel M Adams; Karuna Chourey; Gregory B Hurst; Robert L Hettich; Chongle Pan
Journal:  J Proteome Res       Date:  2012-02-16       Impact factor: 4.466

4.  Quantitative tissue proteomic investigation of invasive ductal carcinoma of breast with luminal B HER2 positive and HER2 enriched subtypes towards potential diagnostic and therapeutic biomarkers.

Authors:  Namita Pendharkar; Akshada Gajbhiye; Khushman Taunk; Sourav RoyChoudhury; Snigdha Dhali; Shubhendu Seal; Anupama Mane; Subodhini Abhang; Manas K Santra; Koel Chaudhury; Srikanth Rapole
Journal:  J Proteomics       Date:  2015-11-28       Impact factor: 4.044

5.  Proteomics-based strategy to identify biomarkers and pharmacological targets in leukemias with t(4;11) translocations.

Authors:  Anastasia K Yocum; Christine M Busch; Carolyn A Felix; Ian A Blair
Journal:  J Proteome Res       Date:  2006-10       Impact factor: 4.466

Review 6.  Biological subtypes of breast cancer: Prognostic and therapeutic implications.

Authors:  Ozlem Yersal; Sabri Barutca
Journal:  World J Clin Oncol       Date:  2014-08-10

7.  Activation of multiple proto-oncogenic tyrosine kinases in breast cancer via loss of the PTPN12 phosphatase.

Authors:  Tingting Sun; Nicola Aceto; Kristen L Meerbrey; Jessica D Kessler; Chunshui Zhou; Ilenia Migliaccio; Don X Nguyen; Natalya N Pavlova; Maria Botero; Jian Huang; Ronald J Bernardi; Earlene Schmitt; Guang Hu; Mamie Z Li; Noah Dephoure; Steven P Gygi; Mitchell Rao; Chad J Creighton; Susan G Hilsenbeck; Chad A Shaw; Donna Muzny; Richard A Gibbs; David A Wheeler; C Kent Osborne; Rachel Schiff; Mohamed Bentires-Alj; Stephen J Elledge; Thomas F Westbrook
Journal:  Cell       Date:  2011-03-04       Impact factor: 41.582

8.  The neu oncogene: an erb-B-related gene encoding a 185,000-Mr tumour antigen.

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Journal:  Nature       Date:  1984 Dec 6-12       Impact factor: 49.962

Review 9.  Proteomics pipeline for biomarker discovery of laser capture microdissected breast cancer tissue.

Authors:  Ning Qing Liu; René B H Braakman; Christoph Stingl; Theo M Luider; John W M Martens; John A Foekens; Arzu Umar
Journal:  J Mammary Gland Biol Neoplasia       Date:  2012-05-30       Impact factor: 2.673

10.  Comprehensive transcriptome analysis identifies novel molecular subtypes and subtype-specific RNAs of triple-negative breast cancer.

Authors:  Yi-Rong Liu; Yi-Zhou Jiang; Xiao-En Xu; Ke-Da Yu; Xi Jin; Xin Hu; Wen-Jia Zuo; Shuang Hao; Jiong Wu; Guang-Yu Liu; Gen-Hong Di; Da-Qiang Li; Xiang-Huo He; Wei-Guo Hu; Zhi-Ming Shao
Journal:  Breast Cancer Res       Date:  2016-03-15       Impact factor: 6.466

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  5 in total

1.  Polymeric nanoassemblies for enrichment and detection of peptides and proteins in human breast milk.

Authors:  Bo Zhao; Jingjing Gao; Mahalia A C Serrano; Kathleen F Arcaro; S Thayumanavan; Richard W Vachet
Journal:  Anal Bioanal Chem       Date:  2020-01-10       Impact factor: 4.142

2.  Evaluation and optimization of reduction and alkylation methods to maximize peptide identification with MS-based proteomics.

Authors:  Suttipong Suttapitugsakul; Haopeng Xiao; Johanna Smeekens; Ronghu Wu
Journal:  Mol Biosyst       Date:  2017-11-21

Review 3.  Understanding breast cancer - The long and winding road.

Authors:  Kiven Erique Lukong
Journal:  BBA Clin       Date:  2017-01-27

4.  Differential expression of NPM, GSTA3, and GNMT in mouse liver following long-term in vivo irradiation by means of uranium tailings.

Authors:  Lan Yi; Hongxiang Mu; Nan Hu; Jing Sun; Jie Yin; Keren Dai; Dingxin Long; Dexin Ding
Journal:  Biosci Rep       Date:  2018-10-17       Impact factor: 3.840

5.  Quantitative proteomic analysis of enhanced cellular effects of electrochemotherapy with Cisplatin in triple-negative breast cancer cells.

Authors:  Lakshya Mittal; Uma K Aryal; Ignacio G Camarillo; Rodrigo M Ferreira; Raji Sundararajan
Journal:  Sci Rep       Date:  2019-09-26       Impact factor: 4.379

  5 in total

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