| Literature DB >> 27881082 |
Birgit Engesæter1, Bianca van Diermen Hidle2, Mona Hansen3, Pia Moltu2, Kjersti Mangseth Staby4, Siri Borchgrevink-Persen5, Olav K Vintermyr4,6, Stefan Lönnberg1, Mari Nygård1, Emiel A M Janssen2,7, Philip E Castle8, Irene Kraus Christiansen9.
Abstract
BACKGROUND: Human papillomavirus (HPV) testing as primary screening for cervical cancer is currently being implemented in Norway in a randomized controlled fashion, involving three laboratories. As part of the quality assurance programme of the implementation, an evaluation of the inter-laboratory reproducibility of the HPV test was initiated, to ensure satisfactory HPV test reliability in all three laboratories.Entities:
Keywords: Cervical cancer screening; Cobas 4800 HPV Test; HPV; HPV primary screening; HPV testing; Human papillomavirus; Inter-laboratory reproducibility; Quality assurance
Mesh:
Year: 2016 PMID: 27881082 PMCID: PMC5122146 DOI: 10.1186/s12879-016-2028-7
Source DB: PubMed Journal: BMC Infect Dis ISSN: 1471-2334 Impact factor: 3.090
Distribution of cytological diagnoses among the 499 samples
| NILM | ASC-US | LSIL | ASC-H | HSIL | Unsatisfactory | |
|---|---|---|---|---|---|---|
| 100 selected samples | 0 | 28a | 28a | 11 | 33 | 0 |
| 399 consecutive samples | 354 | 8 | 5 | 0 | 5 | 27 |
aHPV positive samples
NILM negative for intraepithelial lesion or malignancy, ASC-US atypical squamous cells of undetermined significance, LSIL low-grade squamous intraepithelial lesion, ASC-H atypical squamous cells, cannot exclude a high-grade lesion, HSIL high-grade squamous intraepithelial lesion
Frequencies of HPV negative, HPV positive and failed samples considering all 499 samples, stratified on cytological categories
| All ( | NILM ( | ASC-US ( | LSIL ( | ASC-H/HSIL ( | Unsatisfactory ( | ASC-US or more severe ( | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| #pos (%) | #neg (%) | #failed (%) | #pos (%) | #neg (%) | #failed (%) | #pos (%) | #neg (%) | #failed (%) | #pos (%) | #neg (%) | #failed (%) | #pos (%) | #neg (%) | #failed (%) | #pos (%) | #neg (%) | #failed (%) | #pos (%) | #neg (%) | #failed (%) | |
| Lab A | 145 (29.1) | 350 (70.1) | 4 (0.8) | 34 (9.6) | 317 (89.6) | 3 (0.8) | 32 (88.9) | 4 (11.1) | 0 (0.0) | 33 (100.0) | 0 (0.0) | 0 (0.0) | 44 (89.8) | 5 (10.2) | 0 (0.0) | 2 (7.4) | 24 (88.9) | 1 (3.7) | 109 (92.4) | 9 (7.6) | 0 (0.0) |
| Lab B | 145 (29.1) | 346 (69.3) | 8 (1.6) | 34 (9.6) | 314 (88.7) | 6 (1.7) | 33 (91.7) | 3 (8.3) | 0 (0.0) | 31 (93.9) | 0 (0.0) | 2 (6.1) | 44 (89.8) | 5 (10.2) | 0 (0.0) | 2 (11.1) | 24 (88.9) | 0 (0.0) | 108 (91.5) | 8 (6.8) | 2 (1.7) |
| Lab C | 141 (28.3) | 355 (71.1) | 3 (0.6) | 32 (9.0) | 321 (90.7) | 1 (0.3) | 31 (86.1) | 4 (11.1) | 1 (2.8) | 32 (96.8) | 0 (0.0) | 1 (3.0) | 44 (89.8) | 5 (10.2) | 0 (0.0) | 2 (7.4) | 25 (92.6) | 0 (0.0) | 107 (90.7) | 9 (7.6) | 2 (1.7) |
| Lab D | 146 (29.3) | 353 (70.7) | 0 (0.0) | 35 (9.9) | 319 (90.1) | 0 (0.0) | 32 (88.9) | 4 (11.1) | 0 (0.0) | 33 (100.0) | 0 (0.0) | 0 (0.0) | 44 (89.8) | 5 (10.2) | 0 (0.0) | 2 (7.4) | 25 (92.6) | 0 (0.0) | 109 (92.4) | 9 (7.6) | 0 (0.0) |
| % Overall Agreement | 95.6 (93.8–97.2) | 95.8 (93.5–97.7) | 94.4 (86.1–100.0) | 90.9 (78.8–100.0) | 100.0 (100.0–100.0) | 92.6 (81.5–100.0) | 95.8 (92.4–99.2) | ||||||||||||||
| % Positive Agreement | 90.8 (85.9–94.9) | 79.4 (65.1–91.5) | 93.9 (84.8–100.0) | 90.9 (78.8–100.0) | 100.0 (100.0–100.0) | 66.7 (0.0–100.0) | 95.5 (91.4–99.1) | ||||||||||||||
| Kappa | 0.94 (0.92–0.97) | 0.88 (0.80–0.93) | 0.86 (0.52–1.00) | n/a | 1.0 | 0.78 (−0.03–1.00) | 0.86 (0.71–0.97) | ||||||||||||||
Agreement statistics with 95% confidence intervals between the laboratories are shown
NILM negative for intraepithelial lesion or malignancy, ASC-US atypical squamous cells of undetermined significance, LSIL low-grade squamous intraepithelial lesion, ASC-H atypical squamous cells, cannot exclude a high-grade lesion, HSIL high-grade squamous intraepithelial lesion
Samples with discordant HPV test results (HPV positive, HPV negative, failed) between the four laboratories
| Cytological finding | Lab A | Lab B | Lab C | Lab D | |
|---|---|---|---|---|---|
| Unsatisfactory | failed | negative | negative | negative | * |
| NILM | failed | negative | negative | negative | * |
| NILM | failed | negative | failed | negative | * |
| NILM | negative | failed | negative | negative | * |
| NILM | negative | failed | negative | negative | * |
| NILM | negative | failed | negative | negative | * |
| NILM | negative | failed | negative | negative | * |
| NILM | negative | failed | negative | negative | * |
| ASCUS | positive | positive | failed | positive | * |
| LSIL | positive | failed | positive | positive | * |
| LSIL | positive | failed | positive | positive | * |
| LSIL | positive | positive | failed | positive | * |
| Unsatisfactory | negative | positive | negative | negative | ** |
| NILM | failed | failed | negative | positive | ** |
| NILM | positive | negative | negative | negative | ** |
| NILM | positive | positive | negative | negative | ** |
| NILM | positive | positive | positive | negative | ** |
| NILM | negative | positive | negative | negative | ** |
| NILM | negative | positive | negative | positive | ** |
| NILM | negative | negative | negative | positive | ** |
| NILM | negative | negative | negative | positive | ** |
| ASCUS | negative | positive | negative | negative | ** |
*Samples for which at least one laboratory reported a failed result, and the women would be recalled to take a new call sample from the cervix
** True discordant samples; would lead to different clinical follow-up procedures
NILM negative for intraepithelial lesion or malignancy, ASC-US atypical squamous cells of undetermined significance, LSIL low-grade squamous intraepithelial lesion
Agreement of HPV test results between the four laboratories including HPV genotype information
| Test results compared | Overall percentage agreement | Positive percentage agreement |
| Number of samples |
|---|---|---|---|---|
| Multiple genotypes taken into consideration | 93.8 | 78.7 | 0.93 (0.91–0.96) | 499 |
| Highest risk genotype taken into consideration | 94.4 | 82.5 | 0.94 (0.91–0.96) | 499 |
Calculations were performed both with and without taking multiple infections into consideration. For calculation not considering multiple infections, HPV type category with highest oncogenic potential was the deciding factor; HPV16>HPV18>HR-HPV