Literature DB >> 27875189

Corresponding Supine and Prone Colon Visualization Using Eigenfunction Analysis and Fold Modeling.

Saad Nadeem, Joseph Marino, Xianfeng Gu, Arie Kaufman.   

Abstract

We present a method for registration and visualization of corresponding supine and prone virtual colonoscopy scans based on eigenfunction analysis and fold modeling. In virtual colonoscopy, CT scans are acquired with the patient in two positions, and their registration is desirable so that physicians can corroborate findings between scans. Our algorithm performs this registration efficiently through the use of Fiedler vector representation (the second eigenfunction of the Laplace-Beltrami operator). This representation is employed to first perform global registration of the two colon positions. The registration is then locally refined using the haustral folds, which are automatically segmented using the 3D level sets of the Fiedler vector. The use of Fiedler vectors and the segmented folds presents a precise way of visualizing corresponding regions across datasets and visual modalities. We present multiple methods of visualizing the results, including 2D flattened rendering and the corresponding 3D endoluminal views. The precise fold modeling is used to automatically find a suitable cut for the 2D flattening, which provides a less distorted visualization. Our approach is robust, and we demonstrate its efficiency and efficacy by showing matched views on both the 2D flattened colons and in the 3D endoluminal view. We analytically evaluate the results by measuring the distance between features on the registered colons, and we also assess our fold segmentation against 20 manually labeled datasets. We have compared our results analytically to previous methods, and have found our method to achieve superior results. We also prove the hot spots conjecture for modeling cylindrical topology using Fiedler vector representation, which allows our approach to be used for general cylindrical geometry modeling and feature extraction.

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Year:  2017        PMID: 27875189      PMCID: PMC7812443          DOI: 10.1109/TVCG.2016.2598791

Source DB:  PubMed          Journal:  IEEE Trans Vis Comput Graph        ISSN: 1077-2626            Impact factor:   4.579


  15 in total

1.  Context preserving maps of tubular structures.

Authors:  Joseph Marino; Wei Zeng; Xianfeng Gu; Arie Kaufman
Journal:  IEEE Trans Vis Comput Graph       Date:  2011-12       Impact factor: 4.579

2.  Intra-patient supine-prone colon registration in CT colonography using shape spectrum.

Authors:  Zhaoqiang Lai; Jiaxi Hu; Chang Liu; Vahid Taimour; Darshan Pai; Jiong Zhu; Jianrong Xu; Jing Hua
Journal:  Med Image Comput Comput Assist Interv       Date:  2010

3.  Planar Visualization of Treelike Structures.

Authors:  Joseph Marino; Arie Kaufman
Journal:  IEEE Trans Vis Comput Graph       Date:  2016-01       Impact factor: 4.579

4.  Lines of curvature for polyp detection in virtual colonoscopy.

Authors:  Lingxiao Zhao; Charl P Botha; Javier O Bescos; Roel Truyen; Frans M Vos; Frits H Post
Journal:  IEEE Trans Vis Comput Graph       Date:  2006 Sep-Oct       Impact factor: 4.579

5.  Colon flattening using heat diffusion Riemannian metric.

Authors:  Krishna Chaitanya Gurijala; Rui Shi; Wei Zeng; Xianfeng Gu; Arie Kaufman
Journal:  IEEE Trans Vis Comput Graph       Date:  2013-12       Impact factor: 4.579

6.  Hot Spots Conjecture and Its Application to Modeling Tubular Structures.

Authors:  Moo K Chung; Seongho Seo; Nagesh Adluru; Houri K Vorperian
Journal:  Mach Learn Med Imaging       Date:  2011-09

7.  Spherical Parameterization Balancing Angle and Area Distortions.

Authors:  Saad Nadeem; Zhengyu Su; Wei Zeng; Arie Kaufman; Xianfeng Gu
Journal:  IEEE Trans Vis Comput Graph       Date:  2016-03-15       Impact factor: 4.579

8.  Registration of prone and supine CT colonography scans using correlation optimized warping and canonical correlation analysis.

Authors:  Shijun Wang; Jianhua Yao; Jiamin Liu; Nicholas Petrick; Robert L Van Uitert; Senthil Periaswamy; Ronald M Summers
Journal:  Med Phys       Date:  2009-12       Impact factor: 4.071

9.  Haustral fold segmentation with curvature-guided level set evolution.

Authors:  Hongbin Zhu; Matthew Barish; Perry Pickhardt; Zhengrong Liang
Journal:  IEEE Trans Biomed Eng       Date:  2012-10-26       Impact factor: 4.538

10.  Registration of central paths and colonic polyps between supine and prone scans in computed tomography colonography: pilot study.

Authors:  Ping Li; Sandy Napel; Burak Acar; David S Paik; R Brooke Jeffrey; Christopher F Beaulieu
Journal:  Med Phys       Date:  2004-10       Impact factor: 4.071

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  5 in total

1.  LDeform: Longitudinal deformation analysis for adaptive radiotherapy of lung cancer.

Authors:  Saad Nadeem; Pengpeng Zhang; Andreas Rimner; Jan-Jakob Sonke; Joseph O Deasy; Allen Tannenbaum
Journal:  Med Phys       Date:  2019-11-26       Impact factor: 4.071

2.  FoldIt: Haustral Folds Detection and Segmentation in Colonoscopy Videos.

Authors:  Shawn Mathew; Saad Nadeem; Arie Kaufman
Journal:  Med Image Comput Comput Assist Interv       Date:  2021-09-21

3.  LMap: Shape-Preserving Local Mappings for Biomedical Visualization.

Authors:  Saad Nadeem; Xianfeng Gu; Arie E Kaufman
Journal:  IEEE Trans Vis Comput Graph       Date:  2017-11-13       Impact factor: 4.579

4.  3D Virtual Pancreatography.

Authors:  Shreeraj Jadhav; Konstantin Dmitriev; Joseph Marino; Matthew Barish; Arie E Kaufman
Journal:  IEEE Trans Vis Comput Graph       Date:  2022-01-28       Impact factor: 4.579

5.  Quantification of accumulated dose and associated anatomical changes of esophagus using weekly Magnetic Resonance Imaging acquired during radiotherapy of locally advanced lung cancer.

Authors:  Sadegh Alam; Maria Thor; Andreas Rimner; Neelam Tyagi; Si-Yuan Zhang; Li Cheng Kuo; Saad Nadeem; Wei Lu; Yu-Chi Hu; Ellen Yorke; Pengpeng Zhang
Journal:  Phys Imaging Radiat Oncol       Date:  2020-03-26
  5 in total

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