Literature DB >> 27871933

A Molecular Prospective for HIRA Complex Assembly and H3.3-Specific Histone Chaperone Function.

M Daniel Ricketts1, Ronen Marmorstein2.   

Abstract

Incorporation of variant histone sequences, in addition to post-translational modification of histones, serves to modulate the chromatin environment. Different histone chaperone proteins mediate the storage and chromatin deposition of variant histones. Although the two non-centromeric histone H3 variants, H3.1 and H3.3, differ by only 5 aa, replacement of histone H3.1 with H3.3 can modulate the transcription for highly expressed and developmentally required genes, lead to the formation of repressive heterochromatin, or aid in DNA and chromatin repair. The human histone cell cycle regulator (HIRA) complex composed of HIRA, ubinuclein-1, CABIN1, and transiently anti-silencing function 1, forms one of the two complexes that bind and deposit H3.3/H4 into chromatin. A number of recent biochemical and structural studies have revealed important details underlying how these proteins assemble and function together as a multiprotein H3.3-specific histone chaperone complex. Here, we present a review of existing data and present a new model for the assembly of the HIRA complex and for the HIRA-mediated incorporation of H3.3/H4 into chromatin.
Copyright © 2016 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  CABIN1; HIRA; UBN1; histone H3.3; histone chaperones

Mesh:

Substances:

Year:  2016        PMID: 27871933      PMCID: PMC5438300          DOI: 10.1016/j.jmb.2016.11.010

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  79 in total

1.  Crystal structure of the nucleosome core particle at 2.8 A resolution.

Authors:  K Luger; A W Mäder; R K Richmond; D F Sargent; T J Richmond
Journal:  Nature       Date:  1997-09-18       Impact factor: 49.962

2.  Nucleosome-depleted chromatin gaps recruit assembly factors for the H3.3 histone variant.

Authors:  Jonathan I Schneiderman; Guillermo A Orsi; Kelly T Hughes; Benjamin Loppin; Kami Ahmad
Journal:  Proc Natl Acad Sci U S A       Date:  2012-11-12       Impact factor: 11.205

3.  Structural insight into how the human helicase subunit MCM2 may act as a histone chaperone together with ASF1 at the replication fork.

Authors:  Nicolas Richet; Danni Liu; Pierre Legrand; Christophe Velours; Armelle Corpet; Albane Gaubert; May Bakail; Gwenaelle Moal-Raisin; Raphael Guerois; Christel Compper; Arthur Besle; Berengère Guichard; Genevieve Almouzni; Françoise Ochsenbein
Journal:  Nucleic Acids Res       Date:  2015-01-23       Impact factor: 16.971

4.  The histone chaperone Asf1p mediates global chromatin disassembly in vivo.

Authors:  Melissa W Adkins; Jessica K Tyler
Journal:  J Biol Chem       Date:  2004-09-26       Impact factor: 5.157

5.  Placing the HIRA histone chaperone complex in the chromatin landscape.

Authors:  Nikolay A Pchelintsev; Tony McBryan; Taranjit Singh Rai; John van Tuyn; Dominique Ray-Gallet; Geneviève Almouzni; Peter D Adams
Journal:  Cell Rep       Date:  2013-04-18       Impact factor: 9.423

6.  Definition of pRB- and p53-dependent and -independent steps in HIRA/ASF1a-mediated formation of senescence-associated heterochromatin foci.

Authors:  Xiaofen Ye; Brad Zerlanko; Rugang Zhang; Neeta Somaiah; Marc Lipinski; Paolo Salomoni; Peter D Adams
Journal:  Mol Cell Biol       Date:  2007-01-22       Impact factor: 4.272

7.  Ubinuclein, a novel nuclear protein interacting with cellular and viral transcription factors.

Authors:  S Aho; M Buisson; T Pajunen; Y W Ryoo; J F Giot; H Gruffat; A Sergeant; J Uitto
Journal:  J Cell Biol       Date:  2000-03-20       Impact factor: 10.539

8.  Histone H3.3 is required for endogenous retroviral element silencing in embryonic stem cells.

Authors:  Simon J Elsässer; Laura A Banaszynski; Kyung-Min Noh; Nichole Diaz; C David Allis
Journal:  Nature       Date:  2015-05-04       Impact factor: 49.962

9.  Yeast CAF-1 assembles histone (H3-H4)2 tetramers prior to DNA deposition.

Authors:  Duane D Winkler; Hui Zhou; Mohd A Dar; Zhiguo Zhang; Karolin Luger
Journal:  Nucleic Acids Res       Date:  2012-08-31       Impact factor: 16.971

10.  HIRA Is Required for Heart Development and Directly Regulates Tnni2 and Tnnt3.

Authors:  Daniel Dilg; Rasha Noureldin M Saleh; Sarah Elizabeth Lee Phelps; Yoann Rose; Laurent Dupays; Cian Murphy; Timothy Mohun; Robert H Anderson; Peter J Scambler; Ariane L A Chapgier
Journal:  PLoS One       Date:  2016-08-12       Impact factor: 3.240

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  17 in total

Review 1.  Molecular basis for chromatin assembly and modification by multiprotein complexes.

Authors:  M Daniel Ricketts; Joseph Han; Mary R Szurgot; Ronen Marmorstein
Journal:  Protein Sci       Date:  2018-12-13       Impact factor: 6.725

2.  H3.3 Nucleosome Assembly Mutants Display a Late-Onset Maternal Effect.

Authors:  Kirk B Burkhart; Steven R Sando; Anna Corrionero; H Robert Horvitz
Journal:  Curr Biol       Date:  2020-05-28       Impact factor: 10.834

3.  HIRA complex presets transcriptional potential through coordinating depositions of the histone variants H3.3 and H2A.Z on the poised genes in mESCs.

Authors:  Yang Yang; Liwei Zhang; Chaoyang Xiong; Jun Chen; Li Wang; Zengqi Wen; Juan Yu; Ping Chen; Yanhui Xu; Jingji Jin; Yong Cai; Guohong Li
Journal:  Nucleic Acids Res       Date:  2022-01-11       Impact factor: 16.971

4.  Synergy of Hir1, Ssn6, and Snf2 global regulators is the functional determinant of a Mac1 transcriptional switch in S. cerevisiae copper homeostasis.

Authors:  Alexandra Voutsina; George S Fragiadakis; Kalliopi Gkouskou; Despina Alexandraki
Journal:  Curr Genet       Date:  2019-01-28       Impact factor: 3.886

5.  HIRA stabilizes skeletal muscle lineage identity.

Authors:  Reem Bou Akar; Léo Machado; Yuefeng Li; Joana Esteves de Lima; Bernadette Drayton-Libotte; F Jeffrey Dilworth; Frédéric Relaix
Journal:  Nat Commun       Date:  2021-06-08       Impact factor: 14.919

6.  Epigenetics meets metabolism through PHB-mediated histone H3.3 deposition by HIRA.

Authors:  Ronen Marmorstein; Peter D Adams
Journal:  Stem Cell Investig       Date:  2017-05-26

Review 7.  Potential coordination role between O-GlcNAcylation and epigenetics.

Authors:  Donglu Wu; Yong Cai; Jingji Jin
Journal:  Protein Cell       Date:  2017-05-09       Impact factor: 14.870

Review 8.  The histone variant H3.3 claims its place in the crowded scene of epigenetics.

Authors:  Daniele Bano; Antonia Piazzesi; Paolo Salomoni; Pierluigi Nicotera
Journal:  Aging (Albany NY)       Date:  2017-03-10       Impact factor: 5.682

9.  Dissecting regulatory pathways for transcription recovery following DNA damage reveals a non-canonical function of the histone chaperone HIRA.

Authors:  Déborah Bouvier; Juliette Ferrand; Odile Chevallier; Michelle T Paulsen; Mats Ljungman; Sophie E Polo
Journal:  Nat Commun       Date:  2021-06-22       Impact factor: 14.919

10.  Recurrent Herpes Simplex Virus Type 1 (HSV-1) Infection Modulates Neuronal Aging Marks in In Vitro and In Vivo Models.

Authors:  Giorgia Napoletani; Virginia Protto; Maria Elena Marcocci; Lucia Nencioni; Anna Teresa Palamara; Giovanna De Chiara
Journal:  Int J Mol Sci       Date:  2021-06-11       Impact factor: 5.923

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