Literature DB >> 27861897

Genome evolution in ductal carcinoma in situ: invasion of the clones.

Anna K Casasent1,2, Mary Edgerton3, Nicholas E Navin1,2,4.   

Abstract

Ductal carcinoma in situ (DCIS) is the most frequently diagnosed early-stage breast cancer. Only a subset of patients progress to invasive ductal carcinoma (IDC), and this presents a formidable clinical challenge for determining which patients to treat aggressively and which patients to monitor without therapeutic intervention. Understanding the molecular and genomic basis of invasion has been difficult to study in DCIS cancers due to several technical obstacles, including low tumour cellularity, lack of fresh-frozen tissues, and intratumour heterogeneity. In this review, we discuss the role of intratumour heterogeneity in the progression of DCIS to IDC in the context of three evolutionary models: independent lineages, evolutionary bottlenecks, and multiclonal invasion. We examine the evidence in support of these models and their relevance to the diagnosis and treatment of patients with DCIS. We also discuss how emerging technologies, such as single-cell sequencing, STAR-FISH, and imaging mass spectrometry, are likely to provide new insights into the evolution of this enigmatic disease.
Copyright © 2016 Pathological Society of Great Britain and Ireland. Published by John Wiley & Sons, Ltd. Copyright © 2016 Pathological Society of Great Britain and Ireland. Published by John Wiley & Sons, Ltd.

Entities:  

Keywords:  DCIS; breast cancer; breast cancer genomics; ductal carcinoma in situ; intratumour heterogeneity; next-generation sequencing; single-cell sequencing

Mesh:

Year:  2016        PMID: 27861897      PMCID: PMC5558847          DOI: 10.1002/path.4840

Source DB:  PubMed          Journal:  J Pathol        ISSN: 0022-3417            Impact factor:   7.996


  126 in total

1.  Dynamics of genomic clones in breast cancer patient xenografts at single-cell resolution.

Authors:  Peter Eirew; Adi Steif; Jaswinder Khattra; Gavin Ha; Damian Yap; Hossein Farahani; Karen Gelmon; Stephen Chia; Colin Mar; Adrian Wan; Emma Laks; Justina Biele; Karey Shumansky; Jamie Rosner; Andrew McPherson; Cydney Nielsen; Andrew J L Roth; Calvin Lefebvre; Ali Bashashati; Camila de Souza; Celia Siu; Radhouane Aniba; Jazmine Brimhall; Arusha Oloumi; Tomo Osako; Alejandra Bruna; Jose L Sandoval; Teresa Algara; Wendy Greenwood; Kaston Leung; Hongwei Cheng; Hui Xue; Yuzhuo Wang; Dong Lin; Andrew J Mungall; Richard Moore; Yongjun Zhao; Julie Lorette; Long Nguyen; David Huntsman; Connie J Eaves; Carl Hansen; Marco A Marra; Carlos Caldas; Sohrab P Shah; Samuel Aparicio
Journal:  Nature       Date:  2014-11-26       Impact factor: 49.962

2.  Gene amplification in ductal carcinoma in situ of the breast.

Authors:  L Burkhardt; T J Grob; I Hermann; E Burandt; M Choschzick; F Jänicke; V Müller; C Bokemeyer; R Simon; G Sauter; W Wilczak; A Lebeau
Journal:  Breast Cancer Res Treat       Date:  2009-12-22       Impact factor: 4.872

3.  Tumor evolution. High burden and pervasive positive selection of somatic mutations in normal human skin.

Authors:  Iñigo Martincorena; Amit Roshan; Moritz Gerstung; Peter Ellis; Peter Van Loo; Stuart McLaren; David C Wedge; Anthony Fullam; Ludmil B Alexandrov; Jose M Tubio; Lucy Stebbings; Andrew Menzies; Sara Widaa; Michael R Stratton; Philip H Jones; Peter J Campbell
Journal:  Science       Date:  2015-05-22       Impact factor: 47.728

4.  Increasing chromosome 1 copy number parallels histological progression in breast carcinogenesis.

Authors:  M C Cummings; M Aubele; A Mattis; D Purdie; P Hutzler; H Höfler; M Werner
Journal:  Br J Cancer       Date:  2000-03       Impact factor: 7.640

5.  SNES: single nucleus exome sequencing.

Authors:  Marco L Leung; Yong Wang; Jill Waters; Nicholas E Navin
Journal:  Genome Biol       Date:  2015-03-25       Impact factor: 13.583

6.  Signatures of post-zygotic structural genetic aberrations in the cells of histologically normal breast tissue that can predispose to sporadic breast cancer.

Authors:  Lars A Forsberg; Chiara Rasi; Gyula Pekar; Hanna Davies; Arkadiusz Piotrowski; Devin Absher; Hamid Reza Razzaghian; Aleksandra Ambicka; Krzysztof Halaszka; Marcin Przewoźnik; Anna Kruczak; Geeta Mandava; Saichand Pasupulati; Julia Hacker; K Reddy Prakash; Ravi Chandra Dasari; Joey Lau; Nelly Penagos-Tafurt; Helena M Olofsson; Gunilla Hallberg; Piotr Skotnicki; Jerzy Mituś; Jaroslaw Skokowski; Michal Jankowski; Ewa Śrutek; Wojciech Zegarski; Eva Tiensuu Janson; Janusz Ryś; Tibor Tot; Jan P Dumanski
Journal:  Genome Res       Date:  2015-10       Impact factor: 9.043

7.  Subclonal diversification of primary breast cancer revealed by multiregion sequencing.

Authors:  Lucy R Yates; Moritz Gerstung; Stian Knappskog; Christine Desmedt; Gunes Gundem; Peter Van Loo; Turid Aas; Ludmil B Alexandrov; Denis Larsimont; Helen Davies; Yilong Li; Young Seok Ju; Manasa Ramakrishna; Hans Kristian Haugland; Peer Kaare Lilleng; Serena Nik-Zainal; Stuart McLaren; Adam Butler; Sancha Martin; Dominic Glodzik; Andrew Menzies; Keiran Raine; Jonathan Hinton; David Jones; Laura J Mudie; Bing Jiang; Delphine Vincent; April Greene-Colozzi; Pierre-Yves Adnet; Aquila Fatima; Marion Maetens; Michail Ignatiadis; Michael R Stratton; Christos Sotiriou; Andrea L Richardson; Per Eystein Lønning; David C Wedge; Peter J Campbell
Journal:  Nat Med       Date:  2015-06-22       Impact factor: 53.440

8.  Uncovering the genomic heterogeneity of multifocal breast cancer.

Authors:  Christine Desmedt; Debora Fumagalli; Elisabetta Pietri; Gabriele Zoppoli; David Brown; Serena Nik-Zainal; Gunes Gundem; Françoise Rothé; Samira Majjaj; Anna Garuti; Enrico Carminati; Sherene Loi; Thomas Van Brussel; Bram Boeckx; Marion Maetens; Laura Mudie; Delphine Vincent; Naima Kheddoumi; Luigi Serra; Ilaria Massa; Alberto Ballestrero; Dino Amadori; Roberto Salgado; Alexandre de Wind; Diether Lambrechts; Martine Piccart; Denis Larsimont; Peter J Campbell; Christos Sotiriou
Journal:  J Pathol       Date:  2015-05-07       Impact factor: 7.996

Review 9.  Evaluation of the current knowledge limitations in breast cancer research: a gap analysis.

Authors:  Alastair Thompson; Keith Brennan; Angela Cox; Julia Gee; Diana Harcourt; Adrian Harris; Michelle Harvie; Ingunn Holen; Anthony Howell; Robert Nicholson; Michael Steel; Charles Streuli
Journal:  Breast Cancer Res       Date:  2008-03-27       Impact factor: 6.466

Review 10.  Cancer genomics: one cell at a time.

Authors:  Nicholas E Navin
Journal:  Genome Biol       Date:  2014-08-30       Impact factor: 13.583

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  29 in total

1.  Advances in Tumor Sampling and Sequencing in Breast Cancer and their Application in Precision Diagnostics and Therapeutics.

Authors:  Amos Chungwon Lee; Han-Byoel Lee; Huiran Yeom; Seo Woo Song; Su Deok Kim; Ahyoun Choi; Sumin Lee; Yongju Lee; Wonshik Han; Sunghoon Kwon
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

2.  HER2-Overexpressing Ductal Carcinoma In Situ Associated with Increased Risk of Ipsilateral Invasive Recurrence, Receptor Discordance with Recurrence.

Authors:  Thomas J O'Keefe; Sarah L Blair; Ava Hosseini; Olivier Harismendy; Anne M Wallace
Journal:  Cancer Prev Res (Phila)       Date:  2020-06-03

Review 3.  Is loss of p53 a driver of ductal carcinoma in situ progression?

Authors:  Rhiannon L Morrissey; Alastair M Thompson; Guillermina Lozano
Journal:  Br J Cancer       Date:  2022-06-28       Impact factor: 7.640

Review 4.  Ductal Carcinoma In Situ of Breast: From Molecular Etiology to Therapeutic Management.

Authors:  Shelby Lynn Hophan; Olena Odnokoz; Huiping Liu; Yuan Luo; Seema Khan; William Gradishar; Zhuan Zhou; Sunil Badve; Mylin A Torres; Yong Wan
Journal:  Endocrinology       Date:  2022-04-01       Impact factor: 4.736

Review 5.  Ductal Carcinoma in Situ: State-of-the-Art Review.

Authors:  Lars J Grimm; Habib Rahbar; Monica Abdelmalak; Allison H Hall; Marc D Ryser
Journal:  Radiology       Date:  2021-12-21       Impact factor: 11.105

Review 6.  Ductal Carcinoma in Situ: Molecular Changes Accompanying Disease Progression.

Authors:  Gemma M Wilson; Phuong Dinh; Nirmala Pathmanathan; J Dinny Graham
Journal:  J Mammary Gland Biol Neoplasia       Date:  2022-05-14       Impact factor: 2.698

Review 7.  Functional Role of miRNAs in the Progression of Breast Ductal Carcinoma in Situ.

Authors:  Bethany N Hannafon; Wei-Qun Ding
Journal:  Am J Pathol       Date:  2018-09-29       Impact factor: 4.307

8.  Whole-Exome Sequencing Analysis of the Progression from Non-Low-Grade Ductal Carcinoma In Situ to Invasive Ductal Carcinoma.

Authors:  Fresia Pareja; David N Brown; Ju Youn Lee; Arnaud Da Cruz Paula; Pier Selenica; Rui Bi; Felipe C Geyer; Andrea Gazzo; Edaise M da Silva; Mahsa Vahdatinia; Anthe A Stylianou; Lorenzo Ferrando; Hannah Y Wen; James B Hicks; Britta Weigelt; Jorge S Reis-Filho
Journal:  Clin Cancer Res       Date:  2020-03-27       Impact factor: 12.531

Review 9.  Ductal Carcinoma in Situ Biomarkers in a Precision Medicine Era: Current and Future Molecular-Based Testing.

Authors:  Kevin Shee; Kristen E Muller; Jonathan Marotti; Todd W Miller; Wendy A Wells; Gregory J Tsongalis
Journal:  Am J Pathol       Date:  2018-10-29       Impact factor: 4.307

Review 10.  Spatial omics and multiplexed imaging to explore cancer biology.

Authors:  Verena C Wimmer; Delphine Merino; Kelly L Rogers; Shalin H Naik; Sabrina M Lewis; Marie-Liesse Asselin-Labat; Quan Nguyen; Jean Berthelet; Xiao Tan
Journal:  Nat Methods       Date:  2021-08-02       Impact factor: 28.547

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